RNA–Protein interactions for RNA: ENST00000463455.1

RTCB-202, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 2

Gene RTCB, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-202ENST00000463455 RPS6KC1Q96S38 1066 aa13.12□□□□□ -0.31
RTCB-202ENST00000463455 COLEC11Q9BWP8 271 aa13.12□□□□□ -0.31
RTCB-202ENST00000463455 VN1R3Q9BXE9 311 aa13.12□□□□□ -0.31
RTCB-202ENST00000463455 PDZD7Q9H5P4 517 aa13.12□□□□□ -0.31
RTCB-202ENST00000463455 MRPL17Q9NRX2 175 aaKnown RBP13.12□□□□□ -0.31
RTCB-202ENST00000463455 MARCH5Q9NX47 278 aa13.12□□□□□ -0.31
RTCB-202ENST00000463455 DPP7Q9UHL4 492 aa13.12□□□□□ -0.31
RTCB-202ENST00000463455 HCN4Q9Y3Q4 1203 aa13.12□□□□□ -0.31
RTCB-202ENST00000463455 NR2E1Q9Y466 385 aa13.12□□□□□ -0.31
RTCB-202ENST00000463455 RBM19Q9Y4C8 960 aaKnown RBP13.12□□□□□ -0.31
RTCB-202ENST00000463455 PDCP20941 246 aa13.11□□□□□ -0.31
RTCB-202ENST00000463455 GUCY2CP25092 1073 aa13.11□□□□□ -0.31
RTCB-202ENST00000463455 CA8P35219 290 aa13.11□□□□□ -0.31
RTCB-202ENST00000463455 OR1G1P47890 313 aa13.11□□□□□ -0.31
RTCB-202ENST00000463455 RBM10P98175 930 aaKnown RBP13.11□□□□□ -0.31
RTCB-202ENST00000463455 CREMQ03060 361 aa13.11□□□□□ -0.31
RTCB-202ENST00000463455 DMP1Q13316 513 aaPredicted RBP13.11□□□□□ -0.31
RTCB-202ENST00000463455 CUL4AQ13619 759 aa13.11□□□□□ -0.31
RTCB-202ENST00000463455 IL17AQ16552 155 aa13.11□□□□□ -0.31
RTCB-202ENST00000463455 LARP1BQ659C4 914 aaKnown RBP13.11□□□□□ -0.31
RTCB-202ENST00000463455 CYP26C1Q6V0L0 522 aa13.11□□□□□ -0.31
RTCB-202ENST00000463455 ZFP42Q96MM3 310 aa13.11□□□□□ -0.31
RTCB-202ENST00000463455 MMTAG2Q9BU76 263 aaKnown RBP13.11□□□□□ -0.31
RTCB-202ENST00000463455 RHOBTB2Q9BYZ6 727 aa13.11□□□□□ -0.31
RTCB-202ENST00000463455 TMEM134Q9H6X4 195 aa13.11□□□□□ -0.31
RTCB-202ENST00000463455 SFXN1Q9H9B4 322 aa13.11□□□□□ -0.31
RTCB-202ENST00000463455 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.11□□□□□ -0.31
RTCB-202ENST00000463455 TNFSF13BQ9Y275 285 aa13.11□□□□□ -0.31
RTCB-202ENST00000463455 K7ERI5 159 aa13.1□□□□□ -0.31
RTCB-202ENST00000463455 ADH1AP07327 375 aa13.1□□□□□ -0.31
RTCB-202ENST00000463455 SCP2P22307 547 aa13.1□□□□□ -0.31
RTCB-202ENST00000463455 AKAP5P24588 427 aa13.1□□□□□ -0.31
RTCB-202ENST00000463455 GLUD2P49448 558 aa13.1□□□□□ -0.31
RTCB-202ENST00000463455 CLCN4P51793 760 aa13.1□□□□□ -0.31
RTCB-202ENST00000463455 DSG1Q02413 1049 aa13.1□□□□□ -0.31
RTCB-202ENST00000463455 TUSC3Q13454 348 aa13.1□□□□□ -0.31
RTCB-202ENST00000463455 TMEM132AQ24JP5 1023 aa13.1□□□□□ -0.31
RTCB-202ENST00000463455 KIAA1841Q6NSI8 718 aa13.1□□□□□ -0.31
RTCB-202ENST00000463455 RINT1Q6NUQ1 792 aa13.1□□□□□ -0.31
RTCB-202ENST00000463455 C15orf39Q6ZRI6 1047 aa13.1□□□□□ -0.31
RTCB-202ENST00000463455 C1orf186Q6ZWK4 172 aa13.1□□□□□ -0.31
RTCB-202ENST00000463455 CABP7Q86V35 215 aa13.1□□□□□ -0.31
RTCB-202ENST00000463455 HDAC7Q8WUI4 952 aa13.1□□□□□ -0.31
RTCB-202ENST00000463455 EDAQ92838 391 aa13.1□□□□□ -0.31
RTCB-202ENST00000463455 KCNN1Q92952 543 aa13.1□□□□□ -0.31
RTCB-202ENST00000463455 KLHL5Q96PQ7 755 aa13.1□□□□□ -0.31
RTCB-202ENST00000463455 NTPCRQ9BSD7 190 aaKnown RBP13.1□□□□□ -0.31
RTCB-202ENST00000463455 APOL6Q9BWW8 343 aa13.1□□□□□ -0.31
RTCB-202ENST00000463455 RXFP1Q9HBX9 757 aa13.1□□□□□ -0.31
RTCB-202ENST00000463455 CHST7Q9NS84 486 aa13.1□□□□□ -0.31
RTCB-202ENST00000463455 MIOSQ9NXC5 875 aa13.1□□□□□ -0.31
RTCB-202ENST00000463455 ARHGAP28Q9P2N2 729 aa13.1□□□□□ -0.31
RTCB-202ENST00000463455 PARP2Q9UGN5 583 aa13.1□□□□□ -0.31
RTCB-202ENST00000463455 ADAM28Q9UKQ2 775 aa13.1□□□□□ -0.31
RTCB-202ENST00000463455 USTQ9Y2C2 406 aa13.1□□□□□ -0.31
RTCB-202ENST00000463455 PRG3Q9Y2Y8 225 aaPredicted RBP13.1□□□□□ -0.31
RTCB-202ENST00000463455 E9PMD0 336 aa13.09□□□□□ -0.31
RTCB-202ENST00000463455 RECQL4O94761 1208 aa13.09□□□□□ -0.31
RTCB-202ENST00000463455 PAPLNO95428 1278 aa13.09□□□□□ -0.31
RTCB-202ENST00000463455 THP07101 528 aa13.09□□□□□ -0.31
RTCB-202ENST00000463455 CNPP09543 421 aaKnown RBP13.09□□□□□ -0.31
RTCB-202ENST00000463455 KLRC2P26717 231 aa13.09□□□□□ -0.31
RTCB-202ENST00000463455 NPTX2P47972 431 aa13.09□□□□□ -0.31
RTCB-202ENST00000463455 USP41Q3LFD5 358 aa13.09□□□□□ -0.31
RTCB-202ENST00000463455 ATAT1Q5SQI0 421 aa13.09□□□□□ -0.31
RTCB-202ENST00000463455 ATF7IP2Q5U623 682 aa13.09□□□□□ -0.31
RTCB-202ENST00000463455 KIAA0319Q5VV43 1072 aa13.09□□□□□ -0.31
RTCB-202ENST00000463455 FUT10Q6P4F1 479 aa13.09□□□□□ -0.31
RTCB-202ENST00000463455 CDR2LQ86X02 465 aaPredicted RBP13.09□□□□□ -0.31
RTCB-202ENST00000463455 DAW1Q8N136 415 aa13.09□□□□□ -0.31
RTCB-202ENST00000463455 CMASQ8NFW8 434 aaPredicted RBP13.09□□□□□ -0.31
RTCB-202ENST00000463455 SPIRE2Q8WWL2 714 aa13.09□□□□□ -0.31
RTCB-202ENST00000463455 AUTS2Q8WXX7 1259 aa13.09□□□□□ -0.31
RTCB-202ENST00000463455 RPGRIP1Q96KN7 1286 aa13.09□□□□□ -0.31
RTCB-202ENST00000463455 FBXL18Q96ME1 805 aa13.09□□□□□ -0.31
RTCB-202ENST00000463455 KCNH6Q9H252 994 aa13.09□□□□□ -0.31
RTCB-202ENST00000463455 FNIP2Q9P278 1114 aa13.09□□□□□ -0.31
RTCB-202ENST00000463455 MUTYHQ9UIF7 546 aa13.09□□□□□ -0.31
RTCB-202ENST00000463455 SF3B1O75533 1304 aaKnown RBP eCLIP13.09□□□□□ -0.31
RTCB-202ENST00000463455 C5orf42Q9H799 3197 aa13.08□□□□□ -0.32
RTCB-202ENST00000463455 VWA3AA6NCI4 1184 aa13.08□□□□□ -0.32
RTCB-202ENST00000463455 FAM86C2PA6NEL3 165 aa13.08□□□□□ -0.32
RTCB-202ENST00000463455 PP2D1A8MPX8 630 aa13.08□□□□□ -0.32
RTCB-202ENST00000463455 H0YCG3 227 aa13.08□□□□□ -0.32
RTCB-202ENST00000463455 TMEM189-UBE2V1I3L0A0 370 aa13.08□□□□□ -0.32
RTCB-202ENST00000463455 HIP1RO75146 1068 aa13.08□□□□□ -0.32
RTCB-202ENST00000463455 BRD1O95696 1058 aa13.08□□□□□ -0.32
RTCB-202ENST00000463455 EPCAMP16422 314 aa13.08□□□□□ -0.32
RTCB-202ENST00000463455 SMTNP53814 917 aa13.08□□□□□ -0.32
RTCB-202ENST00000463455 PEX3P56589 373 aa13.08□□□□□ -0.32
RTCB-202ENST00000463455 ELAVL2Q12926 359 aaKnown RBP13.08□□□□□ -0.32
RTCB-202ENST00000463455 MAPK7Q13164 816 aa13.08□□□□□ -0.32
RTCB-202ENST00000463455 HSP90AA2PQ14568 343 aaPredicted RBP13.08□□□□□ -0.32
RTCB-202ENST00000463455 TMEM119Q4V9L6 283 aa13.08□□□□□ -0.32
RTCB-202ENST00000463455 PDXDC1Q6P996 788 aa13.08□□□□□ -0.32
RTCB-202ENST00000463455 BMP8AQ7Z5Y6 402 aa13.08□□□□□ -0.32
RTCB-202ENST00000463455 SYT2Q8N9I0 419 aaPredicted RBP13.08□□□□□ -0.32
RTCB-202ENST00000463455 CDK5RAP3Q96JB5 506 aa13.08□□□□□ -0.32
RTCB-202ENST00000463455 KIFC3Q9BVG8 833 aa13.08□□□□□ -0.32
RTCB-202ENST00000463455 RUSC1Q9BVN2 902 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms