RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 FBXW11Q9UKB1 542 aa17.44■□□□□ 0.38
SND1-203ENST00000463020 SSX2IPQ9Y2D8 614 aa17.44■□□□□ 0.38
SND1-203ENST00000463020 USP20Q9Y2K6 914 aa17.44■□□□□ 0.38
SND1-203ENST00000463020 MYH15Q9Y2K3 1946 aa17.44■□□□□ 0.38
SND1-203ENST00000463020 EPG5Q9HCE0 2579 aa17.44■□□□□ 0.38
SND1-203ENST00000463020 KIF4AO95239 1232 aa17.43■□□□□ 0.38
SND1-203ENST00000463020 EDN1P05305 212 aa17.43■□□□□ 0.38
SND1-203ENST00000463020 FSHRP23945 695 aa17.43■□□□□ 0.38
SND1-203ENST00000463020 SCRN1Q12765 414 aa17.43■□□□□ 0.38
SND1-203ENST00000463020 USP41Q3LFD5 358 aa17.43■□□□□ 0.38
SND1-203ENST00000463020 DGLUCYQ7Z3D6 616 aa17.43■□□□□ 0.38
SND1-203ENST00000463020 TCP11Q8WWU5 503 aa17.43■□□□□ 0.38
SND1-203ENST00000463020 COLEC11Q9BWP8 271 aa17.43■□□□□ 0.38
SND1-203ENST00000463020 ZSWIM4Q9H7M6 989 aa17.43■□□□□ 0.38
SND1-203ENST00000463020 GPRC5CQ9NQ84 441 aa17.43■□□□□ 0.38
SND1-203ENST00000463020 HCFC1R1Q9NWW0 138 aa17.43■□□□□ 0.38
SND1-203ENST00000463020 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.43■□□□□ 0.38
SND1-203ENST00000463020 GIT1Q9Y2X7 761 aa17.43■□□□□ 0.38
SND1-203ENST00000463020 PPME1Q9Y570 386 aa17.43■□□□□ 0.38
SND1-203ENST00000463020 CCDC194A0A1B0GVG4 234 aa17.42■□□□□ 0.38
SND1-203ENST00000463020 CASTOR2A6NHX0 329 aa17.42■□□□□ 0.38
SND1-203ENST00000463020 PTGESO14684 152 aa17.42■□□□□ 0.38
SND1-203ENST00000463020 CPLX1O14810 134 aa17.42■□□□□ 0.38
SND1-203ENST00000463020 CCL16O15467 120 aa17.42■□□□□ 0.38
SND1-203ENST00000463020 ASAP2O43150 1006 aa17.42■□□□□ 0.38
SND1-203ENST00000463020 CD72P21854 359 aa17.42■□□□□ 0.38
SND1-203ENST00000463020 PSMA5P28066 241 aa17.42■□□□□ 0.38
SND1-203ENST00000463020 AXLP30530 894 aa17.42■□□□□ 0.38
SND1-203ENST00000463020 STARD6P59095 220 aa17.42■□□□□ 0.38
SND1-203ENST00000463020 GALNT17Q6IS24 598 aa17.42■□□□□ 0.38
SND1-203ENST00000463020 LNX1Q8TBB1 728 aaPredicted RBP17.42■□□□□ 0.38
SND1-203ENST00000463020 NXPE3Q969Y0 559 aa17.42■□□□□ 0.38
SND1-203ENST00000463020 CCDC51Q96ER9 411 aa17.42■□□□□ 0.38
SND1-203ENST00000463020 ZNF274Q96GC6 653 aaPredicted RBP17.42■□□□□ 0.38
SND1-203ENST00000463020 EIF2AK1Q9BQI3 630 aaKnown RBP17.42■□□□□ 0.38
SND1-203ENST00000463020 NOTCH4Q99466 2003 aa17.42■□□□□ 0.38
SND1-203ENST00000463020 KMT2BQ9UMN6 2715 aaPredicted RBP17.41■□□□□ 0.38
SND1-203ENST00000463020 CTDNEP1O95476 244 aa17.41■□□□□ 0.38
SND1-203ENST00000463020 GRIK3Q13003 919 aa17.41■□□□□ 0.38
SND1-203ENST00000463020 NR5A1Q13285 461 aa17.41■□□□□ 0.38
SND1-203ENST00000463020 HSP90AA2PQ14568 343 aaPredicted RBP17.41■□□□□ 0.38
SND1-203ENST00000463020 NAB2Q15742 525 aa17.41■□□□□ 0.38
SND1-203ENST00000463020 RSPO2Q6UXX9 243 aaPredicted RBP17.41■□□□□ 0.38
SND1-203ENST00000463020 FGF13Q92913 245 aa17.41■□□□□ 0.38
SND1-203ENST00000463020 TNFRSF25Q93038 417 aa17.41■□□□□ 0.38
SND1-203ENST00000463020 IPO9Q96P70 1041 aaKnown RBP17.41■□□□□ 0.38
SND1-203ENST00000463020 HSD17B14Q9BPX1 270 aa17.41■□□□□ 0.38
SND1-203ENST00000463020 HINFPQ9BQA5 517 aa17.41■□□□□ 0.38
SND1-203ENST00000463020 KXD1Q9BQD3 176 aa17.41■□□□□ 0.38
SND1-203ENST00000463020 DDX23Q9BUQ8 820 aaKnown RBP17.41■□□□□ 0.38
SND1-203ENST00000463020 POLR3FQ9H1D9 316 aaPredicted RBP17.41■□□□□ 0.38
SND1-203ENST00000463020 SEMA4AQ9H3S1 761 aa17.41■□□□□ 0.38
SND1-203ENST00000463020 PARP2Q9UGN5 583 aa17.41■□□□□ 0.38
SND1-203ENST00000463020 DPP7Q9UHL4 492 aa17.41■□□□□ 0.38
SND1-203ENST00000463020 CDH7Q9ULB5 785 aa17.41■□□□□ 0.38
SND1-203ENST00000463020 PATJQ8NI35 1801 aa17.41■□□□□ 0.38
SND1-203ENST00000463020 VWA8A3KMH1 1905 aa17.41■□□□□ 0.38
SND1-203ENST00000463020 A0A1B0GUA9 196 aa17.4■□□□□ 0.38
SND1-203ENST00000463020 SHISA7A6NL88 538 aa17.4■□□□□ 0.38
SND1-203ENST00000463020 NRG2O14511 850 aaPredicted RBP17.4■□□□□ 0.38
SND1-203ENST00000463020 TBX3O15119 743 aa17.4■□□□□ 0.38
SND1-203ENST00000463020 DKC1O60832 514 aaKnown RBP eCLIP17.4■□□□□ 0.38
SND1-203ENST00000463020 GCFC2P16383 781 aaKnown RBP17.4■□□□□ 0.38
SND1-203ENST00000463020 MXD4Q14582 209 aaPredicted RBP17.4■□□□□ 0.38
SND1-203ENST00000463020 SLC27A1Q6PCB7 646 aa17.4■□□□□ 0.38
SND1-203ENST00000463020 OTUD6AQ7L8S5 288 aa17.4■□□□□ 0.38
SND1-203ENST00000463020 EXOC8Q8IYI6 725 aa17.4■□□□□ 0.38
SND1-203ENST00000463020 PIGOQ8TEQ8 1089 aa17.4■□□□□ 0.38
SND1-203ENST00000463020 TRIM6Q9C030 488 aaPredicted RBP17.4■□□□□ 0.38
SND1-203ENST00000463020 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.4■□□□□ 0.38
SND1-203ENST00000463020 DLL3Q9NYJ7 618 aa17.4■□□□□ 0.38
SND1-203ENST00000463020 SPTBN2O15020 2390 aa17.4■□□□□ 0.38
SND1-203ENST00000463020 TADA2AO75478 443 aa17.39■□□□□ 0.37
SND1-203ENST00000463020 C1RP00736 705 aa17.39■□□□□ 0.37
SND1-203ENST00000463020 C8AP07357 584 aa17.39■□□□□ 0.37
SND1-203ENST00000463020 RARRES1P49788 294 aa17.39■□□□□ 0.37
SND1-203ENST00000463020 POU5F1BQ06416 359 aa17.39■□□□□ 0.37
SND1-203ENST00000463020 FAM171A1Q5VUB5 890 aa17.39■□□□□ 0.37
SND1-203ENST00000463020 ELMSAN1Q6PJG2 1045 aa17.39■□□□□ 0.37
SND1-203ENST00000463020 MAEAQ7L5Y9 396 aa17.39■□□□□ 0.37
SND1-203ENST00000463020 CEP57Q86XR8 500 aa17.39■□□□□ 0.37
SND1-203ENST00000463020 ING5Q8WYH8 240 aa17.39■□□□□ 0.37
SND1-203ENST00000463020 BSNDQ8WZ55 320 aa17.39■□□□□ 0.37
SND1-203ENST00000463020 RUBCNQ92622 972 aa17.39■□□□□ 0.37
SND1-203ENST00000463020 PLA2G2FQ9BZM2 168 aa17.39■□□□□ 0.37
SND1-203ENST00000463020 CYP46A1Q9Y6A2 500 aa17.39■□□□□ 0.37
SND1-203ENST00000463020 KANSL1LA0AUZ9 987 aa17.38■□□□□ 0.37
SND1-203ENST00000463020 USO1O60763 962 aaKnown RBP17.38■□□□□ 0.37
SND1-203ENST00000463020 NR1I2O75469 434 aa17.38■□□□□ 0.37
SND1-203ENST00000463020 LYPLA2O95372 231 aa17.38■□□□□ 0.37
SND1-203ENST00000463020 TUSC3Q13454 348 aa17.38■□□□□ 0.37
SND1-203ENST00000463020 TFDP1Q14186 410 aa17.38■□□□□ 0.37
SND1-203ENST00000463020 PCBP1Q15365 356 aaKnown RBP eCLIP17.38■□□□□ 0.374e-9■■■■□ 24.3
SND1-203ENST00000463020 MLF2Q15773 248 aaPredicted RBP17.38■□□□□ 0.37
SND1-203ENST00000463020 PSMD5Q16401 504 aa17.38■□□□□ 0.37
SND1-203ENST00000463020 RSPO4Q2I0M5 234 aaPredicted RBP17.38■□□□□ 0.37
SND1-203ENST00000463020 SLC44A4Q53GD3 710 aa17.38■□□□□ 0.37
SND1-203ENST00000463020 TSSK4Q6SA08 328 aa17.38■□□□□ 0.37
SND1-203ENST00000463020 CD300LGQ6UXG3 332 aa17.38■□□□□ 0.37
SND1-203ENST00000463020 GPR65Q8IYL9 337 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms