RNA–Protein interactions for RNA: ENST00000463004.5

RBM39-223, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 4,580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-223ENST00000463004 NUP85Q9BW27 656 aa12.55□□□□□ -0.4
RBM39-223ENST00000463004 SPDYE16A6NNV3 312 aaPredicted RBP12.54□□□□□ -0.4
RBM39-223ENST00000463004 RPS6KA5O75582 802 aa12.54□□□□□ -0.4
RBM39-223ENST00000463004 ELF1P32519 619 aa12.54□□□□□ -0.4
RBM39-223ENST00000463004 DR1Q01658 176 aa12.54□□□□□ -0.4
RBM39-223ENST00000463004 GNASQ5JWF2 1037 aa12.54□□□□□ -0.4
RBM39-223ENST00000463004 FYB2Q5VWT5 728 aa12.54□□□□□ -0.4
RBM39-223ENST00000463004 CHADLQ6NUI6 762 aa12.54□□□□□ -0.4
RBM39-223ENST00000463004 ANKRD23Q86SG2 305 aa12.54□□□□□ -0.4
RBM39-223ENST00000463004 GLYCTKQ8IVS8 523 aa12.54□□□□□ -0.4
RBM39-223ENST00000463004 ETNPPLQ8TBG4 499 aa12.54□□□□□ -0.4
RBM39-223ENST00000463004 TRPM4Q8TD43 1214 aa12.54□□□□□ -0.4
RBM39-223ENST00000463004 PLCD4Q9BRC7 762 aa12.54□□□□□ -0.4
RBM39-223ENST00000463004 TARS2Q9BW92 718 aaKnown RBP12.54□□□□□ -0.4
RBM39-223ENST00000463004 TRIM7Q9C029 511 aa12.54□□□□□ -0.4
RBM39-223ENST00000463004 VPS37BQ9H9H4 285 aa12.54□□□□□ -0.4
RBM39-223ENST00000463004 CYP3A43Q9HB55 503 aa12.54□□□□□ -0.4
RBM39-223ENST00000463004 GPR182O15218 404 aa12.54□□□□□ -0.4
RBM39-223ENST00000463004 MCF2P10911 925 aa12.54□□□□□ -0.4
RBM39-223ENST00000463004 WDR49Q8IV35 697 aa12.54□□□□□ -0.4
RBM39-223ENST00000463004 OSBPL9Q96SU4 736 aa12.54□□□□□ -0.4
RBM39-223ENST00000463004 PAIP2Q9BPZ3 127 aaKnown RBP12.54□□□□□ -0.4
RBM39-223ENST00000463004 SYT17Q9BSW7 474 aa12.54□□□□□ -0.4
RBM39-223ENST00000463004 ZNF518BQ9C0D4 1074 aa12.54□□□□□ -0.4
RBM39-223ENST00000463004 SCAF8Q9UPN6 1271 aaKnown RBP12.54□□□□□ -0.4
RBM39-223ENST00000463004 ADAMTS7Q9UKP4 1686 aa12.54□□□□□ -0.4
RBM39-223ENST00000463004 ERICH4A6NGS2 130 aa12.54□□□□□ -0.4
RBM39-223ENST00000463004 GZMAP12544 262 aa12.54□□□□□ -0.4
RBM39-223ENST00000463004 NOP14P78316 857 aaKnown RBP12.54□□□□□ -0.4
RBM39-223ENST00000463004 MAP1SQ66K74 1059 aaPredicted RBP12.54□□□□□ -0.4
RBM39-223ENST00000463004 E4F1Q66K89 784 aaPredicted RBP12.54□□□□□ -0.4
RBM39-223ENST00000463004 PLPPR4Q7Z2D5 763 aa12.54□□□□□ -0.4
RBM39-223ENST00000463004 SLC9A9Q8IVB4 645 aa12.54□□□□□ -0.4
RBM39-223ENST00000463004 STRCP1A6NGW2 1772 aa12.54□□□□□ -0.4
RBM39-223ENST00000463004 GOLGA8CPA6NN73 597 aa12.54□□□□□ -0.4
RBM39-223ENST00000463004 A8MXQ7 604 aa12.54□□□□□ -0.4
RBM39-223ENST00000463004 SPATA31C2B4DYI2 1134 aa12.54□□□□□ -0.4
RBM39-223ENST00000463004 ZBTB48P10074 688 aaPredicted RBP12.54□□□□□ -0.4
RBM39-223ENST00000463004 CYP2C8P10632 490 aa12.54□□□□□ -0.4
RBM39-223ENST00000463004 PAX3P23760 479 aa12.54□□□□□ -0.4
RBM39-223ENST00000463004 PCSK1P29120 753 aa12.54□□□□□ -0.4
RBM39-223ENST00000463004 PSMC1P62191 440 aaKnown RBP12.54□□□□□ -0.4
RBM39-223ENST00000463004 DHX34Q14147 1143 aaKnown RBP12.54□□□□□ -0.4
RBM39-223ENST00000463004 PTPN21Q16825 1174 aa12.54□□□□□ -0.4
RBM39-223ENST00000463004 MUM1L1Q5H9M0 696 aa12.54□□□□□ -0.4
RBM39-223ENST00000463004 C11orf70Q9BRQ4 267 aa12.54□□□□□ -0.4
RBM39-223ENST00000463004 AGAP1Q9UPQ3 857 aa12.54□□□□□ -0.4
RBM39-223ENST00000463004 NUP98P52948 1817 aa12.53□□□□□ -0.4
RBM39-223ENST00000463004 CARNS1A5YM72 827 aa12.53□□□□□ -0.4
RBM39-223ENST00000463004 M0QYV0 167 aa12.53□□□□□ -0.4
RBM39-223ENST00000463004 ITGA4P13612 1032 aa12.53□□□□□ -0.4
RBM39-223ENST00000463004 AKR1A1P14550 325 aa12.53□□□□□ -0.4
RBM39-223ENST00000463004 CYP2C19P33261 490 aa12.53□□□□□ -0.4
RBM39-223ENST00000463004 ACOT2P49753 483 aa12.53□□□□□ -0.4
RBM39-223ENST00000463004 RBBP8NLQ8NC74 664 aaPredicted RBP12.53□□□□□ -0.4
RBM39-223ENST00000463004 SPATA20Q8TB22 786 aa12.53□□□□□ -0.4
RBM39-223ENST00000463004 PRPF31Q8WWY3 499 aaKnown RBP12.53□□□□□ -0.4
RBM39-223ENST00000463004 PPP1R16BQ96T49 567 aa12.53□□□□□ -0.4
RBM39-223ENST00000463004 MTIF3Q9H2K0 278 aaKnown RBP12.53□□□□□ -0.4
RBM39-223ENST00000463004 EPB41L5Q9HCM4 733 aa12.53□□□□□ -0.4
RBM39-223ENST00000463004 C10orf71Q711Q0 1435 aa12.53□□□□□ -0.4
RBM39-223ENST00000463004 KRT15P19012 456 aa12.53□□□□□ -0.4
RBM39-223ENST00000463004 GARSP41250 739 aaKnown RBP12.53□□□□□ -0.4
RBM39-223ENST00000463004 ARHGAP25P42331 645 aa12.53□□□□□ -0.4
RBM39-223ENST00000463004 PIGHQ14442 188 aaPredicted RBP12.53□□□□□ -0.4
RBM39-223ENST00000463004 C1orf186Q6ZWK4 172 aa12.53□□□□□ -0.4
RBM39-223ENST00000463004 SPATS2Q86XZ4 545 aaKnown RBP12.53□□□□□ -0.4
RBM39-223ENST00000463004 C4orf32Q8N8J7 132 aa12.53□□□□□ -0.4
RBM39-223ENST00000463004 KIAA0895Q8NCT3 520 aa12.53□□□□□ -0.4
RBM39-223ENST00000463004 REPS2Q8NFH8 660 aa12.53□□□□□ -0.4
RBM39-223ENST00000463004 C18orf8Q96DM3 657 aa12.53□□□□□ -0.4
RBM39-223ENST00000463004 CFAP57Q96MR6 1250 aa12.53□□□□□ -0.4
RBM39-223ENST00000463004 RRAGCQ9HB90 399 aa12.53□□□□□ -0.4
RBM39-223ENST00000463004 POLD4Q9HCU8 107 aa12.53□□□□□ -0.4
RBM39-223ENST00000463004 ANAPC5Q9UJX4 755 aa12.53□□□□□ -0.4
RBM39-223ENST00000463004 FHOD1Q9Y613 1164 aa12.53□□□□□ -0.4
RBM39-223ENST00000463004 H3BRB1 525 aa12.53□□□□□ -0.4
RBM39-223ENST00000463004 SGK1O00141 431 aa12.53□□□□□ -0.4
RBM39-223ENST00000463004 HOXA2O43364 376 aa12.53□□□□□ -0.4
RBM39-223ENST00000463004 BMT2Q1RMZ1 405 aa12.53□□□□□ -0.4
RBM39-223ENST00000463004 WDR72Q3MJ13 1102 aa12.53□□□□□ -0.4
RBM39-223ENST00000463004 TRIM65Q6PJ69 517 aa12.53□□□□□ -0.4
RBM39-223ENST00000463004 LBX2Q6XYB7 198 aa12.53□□□□□ -0.4
RBM39-223ENST00000463004 MAP4K3Q8IVH8 894 aa12.53□□□□□ -0.4
RBM39-223ENST00000463004 NME8Q8N427 588 aa12.53□□□□□ -0.4
RBM39-223ENST00000463004 APPL2Q8NEU8 664 aa12.53□□□□□ -0.4
RBM39-223ENST00000463004 INPP4AQ96PE3 977 aaPredicted RBP12.53□□□□□ -0.4
RBM39-223ENST00000463004 GCNAQ96QF7 691 aa12.53□□□□□ -0.4
RBM39-223ENST00000463004 TSPAN18Q96SJ8 248 aa12.53□□□□□ -0.4
RBM39-223ENST00000463004 FAM129AQ9BZQ8 928 aa12.53□□□□□ -0.4
RBM39-223ENST00000463004 DPH5Q9H2P9 285 aa12.53□□□□□ -0.4
RBM39-223ENST00000463004 TUT1Q9H6E5 874 aaKnown RBP12.53□□□□□ -0.4
RBM39-223ENST00000463004 SNX12Q9UMY4 172 aa12.53□□□□□ -0.4
RBM39-223ENST00000463004 SMIM23A6NLE4 172 aa12.52□□□□□ -0.4
RBM39-223ENST00000463004 NFKBIEO00221 500 aa12.52□□□□□ -0.4
RBM39-223ENST00000463004 CABYRO75952 493 aa12.52□□□□□ -0.4
RBM39-223ENST00000463004 FGGP02679 453 aa12.52□□□□□ -0.4
RBM39-223ENST00000463004 MAPRE1Q15691 268 aaKnown RBP12.52□□□□□ -0.4
RBM39-223ENST00000463004 HHATQ5VTY9 493 aa12.52□□□□□ -0.4
RBM39-223ENST00000463004 CCDC121Q6ZUS5 278 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms