RNA–Protein interactions for RNA: ENST00000461394.5

MSH2-204, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-204ENST00000461394 SAPCD2Q86UD0 394 aa7.35□□□□□ -1.23
MSH2-204ENST00000461394 ARHGEF19Q8IW93 802 aa7.35□□□□□ -1.23
MSH2-204ENST00000461394 PPM1KQ8N3J5 372 aa7.35□□□□□ -1.23
MSH2-204ENST00000461394 MSL3Q8N5Y2 521 aaKnown RBP7.35□□□□□ -1.23
MSH2-204ENST00000461394 PDCD7Q8N8D1 485 aaKnown RBP7.35□□□□□ -1.23
MSH2-204ENST00000461394 FBXL13Q8NEE6 735 aa7.35□□□□□ -1.23
MSH2-204ENST00000461394 PLEKHO2Q8TD55 490 aa7.35□□□□□ -1.23
MSH2-204ENST00000461394 NLRP7Q8WX94 980 aa7.35□□□□□ -1.23
MSH2-204ENST00000461394 TSC1Q92574 1164 aa7.35□□□□□ -1.23
MSH2-204ENST00000461394 GLMNQ92990 594 aa7.35□□□□□ -1.23
MSH2-204ENST00000461394 PBXIP1Q96AQ6 731 aa7.35□□□□□ -1.23
MSH2-204ENST00000461394 ZBTB10Q96DT7 871 aa7.35□□□□□ -1.23
MSH2-204ENST00000461394 ZBTB45Q96K62 511 aaPredicted RBP7.35□□□□□ -1.23
MSH2-204ENST00000461394 MFSD14AQ96MC6 490 aa7.35□□□□□ -1.23
MSH2-204ENST00000461394 POP1Q99575 1024 aaKnown RBP7.35□□□□□ -1.23
MSH2-204ENST00000461394 TMEM117Q9H0C3 514 aa7.35□□□□□ -1.23
MSH2-204ENST00000461394 RNPEPQ9H4A4 650 aa7.35□□□□□ -1.23
MSH2-204ENST00000461394 CDHR5Q9HBB8 845 aa7.35□□□□□ -1.23
MSH2-204ENST00000461394 TOPORSQ9NS56 1045 aaPredicted RBP7.35□□□□□ -1.23
MSH2-204ENST00000461394 C1orf112Q9NSG2 853 aa7.35□□□□□ -1.23
MSH2-204ENST00000461394 ADAMTS1Q9UHI8 967 aa7.35□□□□□ -1.23
MSH2-204ENST00000461394 FBXL5Q9UKA1 691 aa7.35□□□□□ -1.23
MSH2-204ENST00000461394 TLL2Q9Y6L7 1015 aa7.35□□□□□ -1.23
MSH2-204ENST00000461394 COL1A2P08123 1366 aa7.34□□□□□ -1.23
MSH2-204ENST00000461394 A0A087X0T9 212 aa7.34□□□□□ -1.23
MSH2-204ENST00000461394 TMCO5BA8MYB1 307 aa7.34□□□□□ -1.23
MSH2-204ENST00000461394 H3BRB1 525 aa7.34□□□□□ -1.23
MSH2-204ENST00000461394 ZNF263O14978 683 aa7.34□□□□□ -1.23
MSH2-204ENST00000461394 BUB1O43683 1085 aa7.34□□□□□ -1.23
MSH2-204ENST00000461394 ZEB2O60315 1214 aa7.34□□□□□ -1.23
MSH2-204ENST00000461394 PPFIA4O75335 1185 aa7.34□□□□□ -1.23
MSH2-204ENST00000461394 C22orf31O95567 290 aa7.34□□□□□ -1.23
MSH2-204ENST00000461394 PIGRP01833 764 aa7.34□□□□□ -1.23
MSH2-204ENST00000461394 GJB1P08034 283 aa7.34□□□□□ -1.23
MSH2-204ENST00000461394 FAM228BP0C875 321 aa7.34□□□□□ -1.23
MSH2-204ENST00000461394 KRT5P13647 590 aa7.34□□□□□ -1.23
MSH2-204ENST00000461394 GTF2H1P32780 548 aa7.34□□□□□ -1.23
MSH2-204ENST00000461394 GTF2F1P35269 517 aaKnown RBP eCLIP7.34□□□□□ -1.23
MSH2-204ENST00000461394 ABL2P42684 1182 aa7.34□□□□□ -1.23
MSH2-204ENST00000461394 JAM2P57087 298 aa7.34□□□□□ -1.23
MSH2-204ENST00000461394 NLRP11P59045 1033 aaKnown RBP7.34□□□□□ -1.23
MSH2-204ENST00000461394 PTK2Q05397 1052 aa7.34□□□□□ -1.23
MSH2-204ENST00000461394 CRHR2Q13324 411 aa7.34□□□□□ -1.23
MSH2-204ENST00000461394 TUBB2AQ13885 445 aa7.34□□□□□ -1.23
MSH2-204ENST00000461394 PSMD6Q15008 389 aa7.34□□□□□ -1.23
MSH2-204ENST00000461394 GRIK4Q16099 956 aa7.34□□□□□ -1.23
MSH2-204ENST00000461394 IFI16Q16666 785 aaKnown RBP7.34□□□□□ -1.23
MSH2-204ENST00000461394 KIAA0753Q2KHM9 967 aa7.34□□□□□ -1.23
MSH2-204ENST00000461394 ZNF568Q3ZCX4 644 aa7.34□□□□□ -1.23
MSH2-204ENST00000461394 SEZ6Q53EL9 994 aa7.34□□□□□ -1.23
MSH2-204ENST00000461394 MORN1Q5T089 497 aa7.34□□□□□ -1.23
MSH2-204ENST00000461394 TEX35Q5T0J7 233 aa7.34□□□□□ -1.23
MSH2-204ENST00000461394 C10orf76Q5T2E6 689 aa7.34□□□□□ -1.23
MSH2-204ENST00000461394 ATF7IP2Q5U623 682 aa7.34□□□□□ -1.23
MSH2-204ENST00000461394 ZPBP2Q6X784 338 aa7.34□□□□□ -1.23
MSH2-204ENST00000461394 ZNF571Q7Z3V5 609 aaPredicted RBP7.34□□□□□ -1.23
MSH2-204ENST00000461394 METTL3Q86U44 580 aaKnown RBP7.34□□□□□ -1.23
MSH2-204ENST00000461394 TLK2Q86UE8 772 aa7.34□□□□□ -1.23
MSH2-204ENST00000461394 CEP112Q8N8E3 955 aa7.34□□□□□ -1.23
MSH2-204ENST00000461394 SMC1BQ8NDV3 1235 aa7.34□□□□□ -1.23
MSH2-204ENST00000461394 TRIM58Q8NG06 486 aa7.34□□□□□ -1.23
MSH2-204ENST00000461394 PARD3BQ8TEW8 1205 aa7.34□□□□□ -1.23
MSH2-204ENST00000461394 TMEM174Q8WUU8 243 aa7.34□□□□□ -1.23
MSH2-204ENST00000461394 SOCS4Q8WXH5 440 aa7.34□□□□□ -1.23
MSH2-204ENST00000461394 UBXN4Q92575 508 aa7.34□□□□□ -1.23
MSH2-204ENST00000461394 EMID1Q96A84 441 aaPredicted RBP7.34□□□□□ -1.23
MSH2-204ENST00000461394 NOX5Q96PH1 765 aa7.34□□□□□ -1.23
MSH2-204ENST00000461394 CEP89Q96ST8 783 aa7.34□□□□□ -1.23
MSH2-204ENST00000461394 APBA2Q99767 749 aa7.34□□□□□ -1.23
MSH2-204ENST00000461394 TUBB2BQ9BVA1 445 aa7.34□□□□□ -1.23
MSH2-204ENST00000461394 LACRTQ9GZZ8 138 aa7.34□□□□□ -1.23
MSH2-204ENST00000461394 TUT1Q9H6E5 874 aaKnown RBP7.34□□□□□ -1.23
MSH2-204ENST00000461394 PDE11AQ9HCR9 933 aa7.34□□□□□ -1.23
MSH2-204ENST00000461394 MRFAP1Q9Y605 127 aa7.34□□□□□ -1.23
MSH2-204ENST00000461394 ADGRA2Q96PE1 1338 aa7.33□□□□□ -1.24
MSH2-204ENST00000461394 A0A0B4J269 797 aa7.33□□□□□ -1.24
MSH2-204ENST00000461394 IGKV6-21A0A0C4DH24 114 aa7.33□□□□□ -1.24
MSH2-204ENST00000461394 FAM170AA1A519 330 aa7.33□□□□□ -1.24
MSH2-204ENST00000461394 RCCD1A6NED2 376 aa7.33□□□□□ -1.24
MSH2-204ENST00000461394 RRN3P2A6NIE6 340 aa7.33□□□□□ -1.24
MSH2-204ENST00000461394 TMEM88BA6NKF7 163 aa7.33□□□□□ -1.24
MSH2-204ENST00000461394 ZBTB42B2RXF5 422 aa7.33□□□□□ -1.24
MSH2-204ENST00000461394 FOXN3O00409 490 aaPredicted RBP7.33□□□□□ -1.24
MSH2-204ENST00000461394 ENC1O14682 589 aa7.33□□□□□ -1.24
MSH2-204ENST00000461394 OGTO15294 1046 aa7.33□□□□□ -1.24
MSH2-204ENST00000461394 TOM1L1O75674 476 aa7.33□□□□□ -1.24
MSH2-204ENST00000461394 ERLIN2O94905 339 aa7.33□□□□□ -1.24
MSH2-204ENST00000461394 LCA5LO95447 670 aa7.33□□□□□ -1.24
MSH2-204ENST00000461394 HLA-DRAP01903 254 aa7.33□□□□□ -1.24
MSH2-204ENST00000461394 TNNC2P02585 160 aa7.33□□□□□ -1.24
MSH2-204ENST00000461394 VTNP04004 478 aa7.33□□□□□ -1.24
MSH2-204ENST00000461394 H2AFZP0C0S5 128 aa7.33□□□□□ -1.24
MSH2-204ENST00000461394 TMEM191BP0C7N4 346 aa7.33□□□□□ -1.24
MSH2-204ENST00000461394 ANXA13P27216 316 aa7.33□□□□□ -1.24
MSH2-204ENST00000461394 CYP2C19P33261 490 aa7.33□□□□□ -1.24
MSH2-204ENST00000461394 PRKCIP41743 596 aa7.33□□□□□ -1.24
MSH2-204ENST00000461394 CPT1AP50416 773 aa7.33□□□□□ -1.24
MSH2-204ENST00000461394 GPC3P51654 580 aa7.33□□□□□ -1.24
MSH2-204ENST00000461394 FCGRTP55899 365 aa7.33□□□□□ -1.24
MSH2-204ENST00000461394 OSTNP61366 133 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms