RNA–Protein interactions for RNA: ENST00000461187.5

SMPD4-216, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 659 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-216ENST00000461187 TGM5O43548 720 aa16.26■□□□□ 0.19
SMPD4-216ENST00000461187 RPA1P27694 616 aa16.26■□□□□ 0.19
SMPD4-216ENST00000461187 SAFBQ15424 915 aaKnown RBP eCLIP16.26■□□□□ 0.19
SMPD4-216ENST00000461187 ZNF174Q15697 407 aa16.26■□□□□ 0.19
SMPD4-216ENST00000461187 CWF19L1Q69YN2 538 aaKnown RBP16.26■□□□□ 0.19
SMPD4-216ENST00000461187 LILRA6Q6PI73 481 aa16.26■□□□□ 0.19
SMPD4-216ENST00000461187 POTEGQ6S5H5 508 aa16.26■□□□□ 0.19
SMPD4-216ENST00000461187 ZBTB8OSQ8IWT0 167 aa16.26■□□□□ 0.19
SMPD4-216ENST00000461187 RIN2Q8WYP3 895 aaPredicted RBP16.26■□□□□ 0.19
SMPD4-216ENST00000461187 SMG7Q92540 1137 aaKnown RBP16.26■□□□□ 0.19
SMPD4-216ENST00000461187 PAAF1Q9BRP4 392 aa16.26■□□□□ 0.19
SMPD4-216ENST00000461187 MFSD1Q9H3U5 465 aa16.26■□□□□ 0.19
SMPD4-216ENST00000461187 PLEKHA4Q9H4M7 779 aa16.26■□□□□ 0.19
SMPD4-216ENST00000461187 PDZD7Q9H5P4 517 aa16.26■□□□□ 0.19
SMPD4-216ENST00000461187 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.26■□□□□ 0.19
SMPD4-216ENST00000461187 IGSF9Q9P2J2 1179 aa16.26■□□□□ 0.19
SMPD4-216ENST00000461187 GFRA3O60609 400 aa16.25■□□□□ 0.19
SMPD4-216ENST00000461187 TADA2AO75478 443 aa16.25■□□□□ 0.19
SMPD4-216ENST00000461187 OR52Z1P0C646 297 aa16.25■□□□□ 0.19
SMPD4-216ENST00000461187 NPR3P17342 541 aa16.25■□□□□ 0.19
SMPD4-216ENST00000461187 RPL17P18621 184 aaKnown RBP16.25■□□□□ 0.19
SMPD4-216ENST00000461187 CYP11B2P19099 503 aa16.25■□□□□ 0.19
SMPD4-216ENST00000461187 ORC2Q13416 577 aaPredicted RBP16.25■□□□□ 0.19
SMPD4-216ENST00000461187 TUSC3Q13454 348 aa16.25■□□□□ 0.19
SMPD4-216ENST00000461187 HSP90AA2PQ14568 343 aaPredicted RBP16.25■□□□□ 0.19
SMPD4-216ENST00000461187 PADI6Q6TGC4 694 aa16.25■□□□□ 0.19
SMPD4-216ENST00000461187 GLYCTKQ8IVS8 523 aa16.25■□□□□ 0.19
SMPD4-216ENST00000461187 CCDC83Q8IWF9 413 aa16.25■□□□□ 0.19
SMPD4-216ENST00000461187 STAMQ92783 540 aa16.25■□□□□ 0.19
SMPD4-216ENST00000461187 C8orf76Q96K31 380 aa16.25■□□□□ 0.19
SMPD4-216ENST00000461187 MYADMQ96S97 322 aa16.25■□□□□ 0.19
SMPD4-216ENST00000461187 CCDC113Q9H0I3 377 aa16.25■□□□□ 0.19
SMPD4-216ENST00000461187 NT5C3AQ9H0P0 336 aa16.25■□□□□ 0.19
SMPD4-216ENST00000461187 C2orf40Q9H1Z8 148 aa16.25■□□□□ 0.19
SMPD4-216ENST00000461187 CXCL16Q9H2A7 254 aa16.25■□□□□ 0.19
SMPD4-216ENST00000461187 FOXP1Q9H334 677 aaPredicted RBP16.25■□□□□ 0.19
SMPD4-216ENST00000461187 LIMCH1Q9UPQ0 1083 aa16.25■□□□□ 0.19
SMPD4-216ENST00000461187 ANK1P16157 1881 aa16.25■□□□□ 0.19
SMPD4-216ENST00000461187 ARHGEF35A5YM69 484 aa16.24■□□□□ 0.19
SMPD4-216ENST00000461187 PROB1E7EW31 1015 aa16.24■□□□□ 0.19
SMPD4-216ENST00000461187 PTGESO14684 152 aa16.24■□□□□ 0.19
SMPD4-216ENST00000461187 N4BP3O15049 544 aa16.24■□□□□ 0.19
SMPD4-216ENST00000461187 NARSO43776 548 aaKnown RBP16.24■□□□□ 0.19
SMPD4-216ENST00000461187 ST18O60284 1047 aa16.24■□□□□ 0.19
SMPD4-216ENST00000461187 EIF5BO60841 1220 aaKnown RBP16.24■□□□□ 0.19
SMPD4-216ENST00000461187 EDN1P05305 212 aa16.24■□□□□ 0.19
SMPD4-216ENST00000461187 PRKCBP05771 671 aa16.24■□□□□ 0.19
SMPD4-216ENST00000461187 GBP2P32456 591 aaPredicted RBP16.24■□□□□ 0.19
SMPD4-216ENST00000461187 PRPF4BQ13523 1007 aaKnown RBP16.24■□□□□ 0.19
SMPD4-216ENST00000461187 MAPK6Q16659 721 aa16.24■□□□□ 0.19
SMPD4-216ENST00000461187 RTP2Q5QGT7 225 aa16.24■□□□□ 0.19
SMPD4-216ENST00000461187 PRSS55Q6UWB4 352 aaPredicted RBP16.24■□□□□ 0.19
SMPD4-216ENST00000461187 FLCNQ8NFG4 579 aa16.24■□□□□ 0.19
SMPD4-216ENST00000461187 ERMNQ8TAM6 284 aa16.24■□□□□ 0.19
SMPD4-216ENST00000461187 RSAD2Q8WXG1 361 aa16.24■□□□□ 0.19
SMPD4-216ENST00000461187 ZDHHC7Q9NXF8 308 aa16.24■□□□□ 0.19
SMPD4-216ENST00000461187 SNTG2Q9NY99 539 aa16.24■□□□□ 0.19
SMPD4-216ENST00000461187 EPS15L1Q9UBC2 864 aa16.24■□□□□ 0.19
SMPD4-216ENST00000461187 USP20Q9Y2K6 914 aa16.24■□□□□ 0.19
SMPD4-216ENST00000461187 SF3B1O75533 1304 aaKnown RBP eCLIP16.23■□□□□ 0.19
SMPD4-216ENST00000461187 CASTOR2A6NHX0 329 aa16.23■□□□□ 0.19
SMPD4-216ENST00000461187 ACKR2O00590 384 aa16.23■□□□□ 0.19
SMPD4-216ENST00000461187 PI15O43692 258 aa16.23■□□□□ 0.19
SMPD4-216ENST00000461187 RECQL4O94761 1208 aa16.23■□□□□ 0.19
SMPD4-216ENST00000461187 THP07101 528 aa16.23■□□□□ 0.19
SMPD4-216ENST00000461187 MUTP22033 750 aa16.23■□□□□ 0.19
SMPD4-216ENST00000461187 NAMPTP43490 491 aa16.23■□□□□ 0.19
SMPD4-216ENST00000461187 CREMQ03060 361 aa16.23■□□□□ 0.19
SMPD4-216ENST00000461187 NAB2Q15742 525 aa16.23■□□□□ 0.19
SMPD4-216ENST00000461187 ECM1Q16610 540 aa16.23■□□□□ 0.19
SMPD4-216ENST00000461187 EEF1DP3Q658K8 133 aa16.23■□□□□ 0.19
SMPD4-216ENST00000461187 NOSTRINQ8IVI9 506 aa16.23■□□□□ 0.19
SMPD4-216ENST00000461187 HASPINQ8TF76 798 aa16.23■□□□□ 0.19
SMPD4-216ENST00000461187 LLPHQ9BRT6 129 aaKnown RBP16.23■□□□□ 0.19
SMPD4-216ENST00000461187 PRKD2Q9BZL6 878 aa16.23■□□□□ 0.19
SMPD4-216ENST00000461187 FBXL21Q9UKT6 434 aa16.23■□□□□ 0.19
SMPD4-216ENST00000461187 WDR87Q6ZQQ6 2873 aa16.22■□□□□ 0.19
SMPD4-216ENST00000461187 ZMYND10O75800 440 aa16.22■□□□□ 0.19
SMPD4-216ENST00000461187 KIF4AO95239 1232 aa16.22■□□□□ 0.19
SMPD4-216ENST00000461187 AOC1P19801 751 aa16.22■□□□□ 0.19
SMPD4-216ENST00000461187 TMEM132AQ24JP5 1023 aa16.22■□□□□ 0.19
SMPD4-216ENST00000461187 TTC38Q5R3I4 469 aa16.22■□□□□ 0.19
SMPD4-216ENST00000461187 ERICH6BQ5W0A0 696 aa16.22■□□□□ 0.19
SMPD4-216ENST00000461187 SIX5Q8N196 739 aa16.22■□□□□ 0.19
SMPD4-216ENST00000461187 SLC44A3Q8N4M1 653 aa16.22■□□□□ 0.19
SMPD4-216ENST00000461187 C4orf32Q8N8J7 132 aa16.22■□□□□ 0.19
SMPD4-216ENST00000461187 FBXO18Q8NFZ0 1043 aa16.22■□□□□ 0.19
SMPD4-216ENST00000461187 DEPTORQ8TB45 409 aa16.22■□□□□ 0.19
SMPD4-216ENST00000461187 CLSTN3Q9BQT9 956 aa16.22■□□□□ 0.19
SMPD4-216ENST00000461187 ADPGKQ9BRR6 497 aa16.22■□□□□ 0.19
SMPD4-216ENST00000461187 TTPALQ9BTX7 342 aa16.22■□□□□ 0.19
SMPD4-216ENST00000461187 PIDD1Q9HB75 910 aa16.22■□□□□ 0.19
SMPD4-216ENST00000461187 POLD4Q9HCU8 107 aa16.22■□□□□ 0.19
SMPD4-216ENST00000461187 FBXW11Q9UKB1 542 aa16.22■□□□□ 0.19
SMPD4-216ENST00000461187 LIG1P18858 919 aa16.21■□□□□ 0.19
SMPD4-216ENST00000461187 NBL1P41271 181 aa16.21■□□□□ 0.19
SMPD4-216ENST00000461187 FXR2P51116 673 aaKnown RBP eCLIP16.21■□□□□ 0.19
SMPD4-216ENST00000461187 PPP2R5AQ15172 486 aa16.21■□□□□ 0.19
SMPD4-216ENST00000461187 FAM171A1Q5VUB5 890 aa16.21■□□□□ 0.19
SMPD4-216ENST00000461187 HAUS3Q68CZ6 603 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms