RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 MIOSQ9NXC5 875 aa19.18■□□□□ 0.66
TOP3A-202ENST00000461127 HES2Q9Y543 173 aa19.18■□□□□ 0.66
TOP3A-202ENST00000461127 COL4A3Q01955 1670 aa19.17■□□□□ 0.66
TOP3A-202ENST00000461127 CCL16O15467 120 aa19.17■□□□□ 0.66
TOP3A-202ENST00000461127 EDIL3O43854 480 aa19.17■□□□□ 0.66
TOP3A-202ENST00000461127 LRP3O75074 770 aa19.17■□□□□ 0.66
TOP3A-202ENST00000461127 QARSP47897 775 aaKnown RBP19.17■□□□□ 0.66
TOP3A-202ENST00000461127 NPEPPSP55786 919 aa19.17■□□□□ 0.66
TOP3A-202ENST00000461127 ADCY1Q08828 1119 aa19.17■□□□□ 0.66
TOP3A-202ENST00000461127 PRSS55Q6UWB4 352 aaPredicted RBP19.17■□□□□ 0.66
TOP3A-202ENST00000461127 CELF5Q8N6W0 485 aaKnown RBP19.17■□□□□ 0.66
TOP3A-202ENST00000461127 CSRNP2Q9H175 543 aa19.17■□□□□ 0.66
TOP3A-202ENST00000461127 DHX33Q9H6R0 707 aaKnown RBP19.17■□□□□ 0.66
TOP3A-202ENST00000461127 TSPAN1O60635 241 aa19.16■□□□□ 0.66
TOP3A-202ENST00000461127 HMGB1P09429 215 aaKnown RBP19.16■□□□□ 0.66
TOP3A-202ENST00000461127 GRIK3Q13003 919 aa19.16■□□□□ 0.66
TOP3A-202ENST00000461127 MTAPQ13126 283 aa19.16■□□□□ 0.66
TOP3A-202ENST00000461127 KRT32Q14532 448 aa19.16■□□□□ 0.66
TOP3A-202ENST00000461127 FERMT3Q86UX7 667 aa19.16■□□□□ 0.66
TOP3A-202ENST00000461127 ITFG1Q8TB96 612 aa19.16■□□□□ 0.66
TOP3A-202ENST00000461127 TTPALQ9BTX7 342 aa19.16■□□□□ 0.66
TOP3A-202ENST00000461127 KCNH3Q9ULD8 1083 aa19.16■□□□□ 0.66
TOP3A-202ENST00000461127 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.16■□□□□ 0.66
TOP3A-202ENST00000461127 CYP3A7-CYP3A51PA0A087WV96 503 aa19.15■□□□□ 0.66
TOP3A-202ENST00000461127 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.15■□□□□ 0.66
TOP3A-202ENST00000461127 RETP07949 1114 aa19.15■□□□□ 0.66
TOP3A-202ENST00000461127 POU2F2P09086 479 aa19.15■□□□□ 0.66
TOP3A-202ENST00000461127 CYP3A7P24462 503 aa19.15■□□□□ 0.66
TOP3A-202ENST00000461127 NLRP5P59047 1200 aa19.15■□□□□ 0.66
TOP3A-202ENST00000461127 DMWDQ09019 674 aa19.15■□□□□ 0.66
TOP3A-202ENST00000461127 HSP90AA2PQ14568 343 aaPredicted RBP19.15■□□□□ 0.66
TOP3A-202ENST00000461127 PSMD5Q16401 504 aa19.15■□□□□ 0.66
TOP3A-202ENST00000461127 PABPC1LQ4VXU2 614 aaKnown RBP19.15■□□□□ 0.66
TOP3A-202ENST00000461127 RTP2Q5QGT7 225 aa19.15■□□□□ 0.66
TOP3A-202ENST00000461127 PDXDC1Q6P996 788 aa19.15■□□□□ 0.66
TOP3A-202ENST00000461127 NPAS3Q8IXF0 933 aa19.15■□□□□ 0.66
TOP3A-202ENST00000461127 CPB2Q96IY4 423 aa19.15■□□□□ 0.66
TOP3A-202ENST00000461127 IER2Q9BTL4 223 aa19.15■□□□□ 0.66
TOP3A-202ENST00000461127 SLKQ9H2G2 1235 aaPredicted RBP19.15■□□□□ 0.66
TOP3A-202ENST00000461127 BMP2KQ9NSY1 1161 aaPredicted RBP19.15■□□□□ 0.66
TOP3A-202ENST00000461127 VPS54Q9P1Q0 977 aa19.15■□□□□ 0.66
TOP3A-202ENST00000461127 INO80B-WBP1J3KQ70 363 aa19.14■□□□□ 0.65
TOP3A-202ENST00000461127 ECI2O75521 394 aa19.14■□□□□ 0.65
TOP3A-202ENST00000461127 TDP2O95551 362 aa19.14■□□□□ 0.65
TOP3A-202ENST00000461127 TFDP1Q14186 410 aa19.14■□□□□ 0.65
TOP3A-202ENST00000461127 MXD4Q14582 209 aaPredicted RBP19.14■□□□□ 0.65
TOP3A-202ENST00000461127 EMC2Q15006 297 aa19.14■□□□□ 0.65
TOP3A-202ENST00000461127 LPAL2Q16609 132 aa19.14■□□□□ 0.65
TOP3A-202ENST00000461127 UVSSAQ2YD98 709 aa19.14■□□□□ 0.65
TOP3A-202ENST00000461127 PRR23BQ6ZRT6 265 aa19.14■□□□□ 0.65
TOP3A-202ENST00000461127 OTUD6AQ7L8S5 288 aa19.14■□□□□ 0.65
TOP3A-202ENST00000461127 CEP57Q86XR8 500 aa19.14■□□□□ 0.65
TOP3A-202ENST00000461127 SLC7A14Q8TBB6 771 aa19.14■□□□□ 0.65
TOP3A-202ENST00000461127 ETNPPLQ8TBG4 499 aa19.14■□□□□ 0.65
TOP3A-202ENST00000461127 PIK3R5Q8WYR1 880 aa19.14■□□□□ 0.65
TOP3A-202ENST00000461127 DDX1Q92499 740 aaKnown RBP19.14■□□□□ 0.65
TOP3A-202ENST00000461127 CLSTN3Q9BQT9 956 aa19.14■□□□□ 0.65
TOP3A-202ENST00000461127 RNF26Q9BY78 433 aaPredicted RBP19.14■□□□□ 0.65
TOP3A-202ENST00000461127 NXF3Q9H4D5 531 aaKnown RBP19.14■□□□□ 0.65
TOP3A-202ENST00000461127 SH3GLB2Q9NR46 395 aa19.14■□□□□ 0.65
TOP3A-202ENST00000461127 HEBP1Q9NRV9 189 aa19.14■□□□□ 0.65
TOP3A-202ENST00000461127 MRPS23Q9Y3D9 190 aaKnown RBP19.14■□□□□ 0.65
TOP3A-202ENST00000461127 ZMYM2Q9UBW7 1377 aa19.14■□□□□ 0.65
TOP3A-202ENST00000461127 MAN2B1O00754 1011 aa19.13■□□□□ 0.65
TOP3A-202ENST00000461127 FOXD2O60548 495 aaPredicted RBP19.13■□□□□ 0.65
TOP3A-202ENST00000461127 P4HBP07237 508 aaKnown RBP19.13■□□□□ 0.65
TOP3A-202ENST00000461127 KCNA4P22459 653 aa19.13■□□□□ 0.65
TOP3A-202ENST00000461127 AKAP5P24588 427 aa19.13■□□□□ 0.65
TOP3A-202ENST00000461127 PTENP60484 403 aa19.13■□□□□ 0.65
TOP3A-202ENST00000461127 AXDND1Q5T1B0 1012 aaPredicted RBP19.13■□□□□ 0.65
TOP3A-202ENST00000461127 FAM171A1Q5VUB5 890 aa19.13■□□□□ 0.65
TOP3A-202ENST00000461127 MOXD1Q6UVY6 613 aa19.13■□□□□ 0.65
TOP3A-202ENST00000461127 RTL10Q7L3V2 364 aa19.13■□□□□ 0.65
TOP3A-202ENST00000461127 ZNF579Q8NAF0 562 aaKnown RBP19.13■□□□□ 0.65
TOP3A-202ENST00000461127 RABGGTAQ92696 567 aa19.13■□□□□ 0.65
TOP3A-202ENST00000461127 DNASE1L2Q92874 299 aa19.13■□□□□ 0.65
TOP3A-202ENST00000461127 SLC26A6Q9BXS9 759 aa19.13■□□□□ 0.65
TOP3A-202ENST00000461127 GDE1Q9NZC3 331 aa19.13■□□□□ 0.65
TOP3A-202ENST00000461127 CNOT1A5YKK6 2376 aaKnown RBP19.12■□□□□ 0.65
TOP3A-202ENST00000461127 F5P12259 2224 aa19.12■□□□□ 0.65
TOP3A-202ENST00000461127 YWHABP31946 246 aaKnown RBP19.12■□□□□ 0.65
TOP3A-202ENST00000461127 ELAVL2Q12926 359 aaKnown RBP19.12■□□□□ 0.65
TOP3A-202ENST00000461127 PPP2R5CQ13362 524 aa19.12■□□□□ 0.65
TOP3A-202ENST00000461127 ADCK5Q3MIX3 580 aa19.12■□□□□ 0.65
TOP3A-202ENST00000461127 TSGA10IPQ3SY00 556 aa19.12■□□□□ 0.65
TOP3A-202ENST00000461127 MAMSTRQ6ZN01 415 aa19.12■□□□□ 0.65
TOP3A-202ENST00000461127 GSTCDQ8NEC7 633 aa19.12■□□□□ 0.65
TOP3A-202ENST00000461127 LNX1Q8TBB1 728 aaPredicted RBP19.12■□□□□ 0.65
TOP3A-202ENST00000461127 ING5Q8WYH8 240 aa19.12■□□□□ 0.65
TOP3A-202ENST00000461127 MTRQ99707 1265 aa19.12■□□□□ 0.65
TOP3A-202ENST00000461127 CHRDQ9H2X0 955 aa19.12■□□□□ 0.65
TOP3A-202ENST00000461127 SEMA4GQ9NTN9 838 aa19.12■□□□□ 0.65
TOP3A-202ENST00000461127 PARP2Q9UGN5 583 aa19.12■□□□□ 0.65
TOP3A-202ENST00000461127 DDX25Q9UHL0 483 aaKnown RBP19.12■□□□□ 0.65
TOP3A-202ENST00000461127 ANGPTL2Q9UKU9 493 aa19.12■□□□□ 0.65
TOP3A-202ENST00000461127 NDRG2Q9UN36 371 aaKnown RBP19.12■□□□□ 0.65
TOP3A-202ENST00000461127 EML1O00423 815 aa19.11■□□□□ 0.65
TOP3A-202ENST00000461127 CCR3P51677 355 aa19.11■□□□□ 0.65
TOP3A-202ENST00000461127 TUSC3Q13454 348 aa19.11■□□□□ 0.65
TOP3A-202ENST00000461127 FZD5Q13467 585 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms