RNA–Protein interactions for RNA: ENST00000461118.5

COL9A2-205, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 1,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-205ENST00000461118 LIMD1Q9UGP4 676 aa20.28■□□□□ 0.84
COL9A2-205ENST00000461118 SRPRBQ9Y5M8 271 aaKnown RBP20.28■□□□□ 0.84
COL9A2-205ENST00000461118 HIP1RO75146 1068 aa20.27■□□□□ 0.84
COL9A2-205ENST00000461118 CTSAP10619 480 aa20.27■□□□□ 0.84
COL9A2-205ENST00000461118 ITGA4P13612 1032 aa20.27■□□□□ 0.84
COL9A2-205ENST00000461118 MAPK7Q13164 816 aa20.27■□□□□ 0.84
COL9A2-205ENST00000461118 DDX53Q86TM3 631 aaKnown RBP20.27■□□□□ 0.84
COL9A2-205ENST00000461118 TMEM169Q96HH4 297 aa20.27■□□□□ 0.84
COL9A2-205ENST00000461118 IGSF21Q96ID5 467 aa20.27■□□□□ 0.84
COL9A2-205ENST00000461118 PLIN2Q99541 437 aa20.27■□□□□ 0.84
COL9A2-205ENST00000461118 NTPCRQ9BSD7 190 aaKnown RBP20.27■□□□□ 0.84
COL9A2-205ENST00000461118 CCSER1Q9C0I3 900 aa20.27■□□□□ 0.84
COL9A2-205ENST00000461118 NRDE2Q9H7Z3 1164 aa20.27■□□□□ 0.84
COL9A2-205ENST00000461118 KCNG1Q9UIX4 513 aa20.27■□□□□ 0.84
COL9A2-205ENST00000461118 USTQ9Y2C2 406 aa20.27■□□□□ 0.84
COL9A2-205ENST00000461118 WDR87Q6ZQQ6 2873 aa20.27■□□□□ 0.83
COL9A2-205ENST00000461118 MTCL1Q9Y4B5 1905 aaKnown RBP20.26■□□□□ 0.83
COL9A2-205ENST00000461118 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.26■□□□□ 0.83
COL9A2-205ENST00000461118 PRR23AA6NEV1 266 aa20.26■□□□□ 0.83
COL9A2-205ENST00000461118 HSP90AA1P07900 732 aaKnown RBP20.26■□□□□ 0.83
COL9A2-205ENST00000461118 GALTP07902 379 aa20.26■□□□□ 0.83
COL9A2-205ENST00000461118 PLA2G4BP0C869 781 aa20.26■□□□□ 0.83
COL9A2-205ENST00000461118 PRPF4BQ13523 1007 aaKnown RBP20.26■□□□□ 0.83
COL9A2-205ENST00000461118 SLC39A14Q15043 492 aa20.26■□□□□ 0.83
COL9A2-205ENST00000461118 CWF19L1Q69YN2 538 aaKnown RBP20.26■□□□□ 0.83
COL9A2-205ENST00000461118 ASTLQ6HA08 431 aaPredicted RBP20.26■□□□□ 0.83
COL9A2-205ENST00000461118 TDRD5Q8NAT2 981 aaKnown RBP20.26■□□□□ 0.83
COL9A2-205ENST00000461118 URGCPQ8TCY9 931 aa20.26■□□□□ 0.83
COL9A2-205ENST00000461118 USP28Q96RU2 1077 aa20.26■□□□□ 0.83
COL9A2-205ENST00000461118 RNF39Q9H2S5 420 aa20.26■□□□□ 0.83
COL9A2-205ENST00000461118 DZANK1Q9NVP4 752 aa20.26■□□□□ 0.83
COL9A2-205ENST00000461118 DNAJB4Q9UDY4 337 aa20.26■□□□□ 0.83
COL9A2-205ENST00000461118 FBXO2Q9UK22 296 aaPredicted RBP20.26■□□□□ 0.83
COL9A2-205ENST00000461118 INPP5FQ9Y2H2 1132 aa20.26■□□□□ 0.83
COL9A2-205ENST00000461118 DOCK8Q8NF50 2099 aa20.26■□□□□ 0.83
COL9A2-205ENST00000461118 TTLL13PA6NNM8 815 aa20.25■□□□□ 0.83
COL9A2-205ENST00000461118 ZC3H11AO75152 810 aaKnown RBP eCLIP20.25■□□□□ 0.83
COL9A2-205ENST00000461118 PRKCBP05771 671 aa20.25■□□□□ 0.83
COL9A2-205ENST00000461118 MARCKSP29966 332 aaPredicted RBP20.25■□□□□ 0.83
COL9A2-205ENST00000461118 NPTX2P47972 431 aa20.25■□□□□ 0.83
COL9A2-205ENST00000461118 AFF1P51825 1210 aaKnown RBP20.25■□□□□ 0.83
COL9A2-205ENST00000461118 PEX3P56589 373 aa20.25■□□□□ 0.83
COL9A2-205ENST00000461118 ATAT1Q5SQI0 421 aa20.25■□□□□ 0.83
COL9A2-205ENST00000461118 HACE1Q8IYU2 909 aa20.25■□□□□ 0.83
COL9A2-205ENST00000461118 TRIM6Q9C030 488 aaPredicted RBP20.25■□□□□ 0.83
COL9A2-205ENST00000461118 GIT1Q9Y2X7 761 aa20.25■□□□□ 0.83
COL9A2-205ENST00000461118 RBM19Q9Y4C8 960 aaKnown RBP20.25■□□□□ 0.83
COL9A2-205ENST00000461118 HES2Q9Y543 173 aa20.25■□□□□ 0.83
COL9A2-205ENST00000461118 ZNF292O60281 2723 aa20.25■□□□□ 0.83
COL9A2-205ENST00000461118 ZMYM2Q9UBW7 1377 aa20.24■□□□□ 0.83
COL9A2-205ENST00000461118 K7ERI5 159 aa20.24■□□□□ 0.83
COL9A2-205ENST00000461118 N4BP3O15049 544 aa20.24■□□□□ 0.83
COL9A2-205ENST00000461118 NPTXRO95502 500 aa20.24■□□□□ 0.83
COL9A2-205ENST00000461118 SSBP05455 408 aaKnown RBP eCLIP20.24■□□□□ 0.83
COL9A2-205ENST00000461118 NPR3P17342 541 aa20.24■□□□□ 0.83
COL9A2-205ENST00000461118 NASPP49321 788 aaPredicted RBP20.24■□□□□ 0.83
COL9A2-205ENST00000461118 RNASELQ05823 741 aaKnown RBP20.24■□□□□ 0.83
COL9A2-205ENST00000461118 DMP1Q13316 513 aaPredicted RBP20.24■□□□□ 0.83
COL9A2-205ENST00000461118 PTPN14Q15678 1187 aa20.24■□□□□ 0.83
COL9A2-205ENST00000461118 ARSHQ5FYA8 562 aa20.24■□□□□ 0.83
COL9A2-205ENST00000461118 CDR2LQ86X02 465 aaPredicted RBP20.24■□□□□ 0.83
COL9A2-205ENST00000461118 ZNF280BQ86YH2 543 aa20.24■□□□□ 0.83
COL9A2-205ENST00000461118 PLCD3Q8N3E9 789 aa20.24■□□□□ 0.83
COL9A2-205ENST00000461118 LRRC15Q8TF66 581 aa20.24■□□□□ 0.83
COL9A2-205ENST00000461118 SPIRE2Q8WWL2 714 aa20.24■□□□□ 0.83
COL9A2-205ENST00000461118 KIFC3Q9BVG8 833 aa20.24■□□□□ 0.83
COL9A2-205ENST00000461118 PDZD7Q9H5P4 517 aa20.24■□□□□ 0.83
COL9A2-205ENST00000461118 TMEM134Q9H6X4 195 aa20.24■□□□□ 0.83
COL9A2-205ENST00000461118 BLOC1S4Q9NUP1 217 aa20.24■□□□□ 0.83
COL9A2-205ENST00000461118 ARHGAP28Q9P2N2 729 aa20.24■□□□□ 0.83
COL9A2-205ENST00000461118 GVINP1Q7Z2Y8 2422 aa20.24■□□□□ 0.83
COL9A2-205ENST00000461118 PHLPP2Q6ZVD8 1323 aa20.24■□□□□ 0.83
COL9A2-205ENST00000461118 TDRD15B5MCY1 1934 aaKnown RBP20.23■□□□□ 0.83
COL9A2-205ENST00000461118 ARL5CA6NH57 179 aa20.23■□□□□ 0.83
COL9A2-205ENST00000461118 CCDC169A6NNP5 214 aa20.23■□□□□ 0.83
COL9A2-205ENST00000461118 LILRB3O75022 631 aa20.23■□□□□ 0.83
COL9A2-205ENST00000461118 DDHD2O94830 711 aa20.23■□□□□ 0.83
COL9A2-205ENST00000461118 EDN1P05305 212 aa20.23■□□□□ 0.83
COL9A2-205ENST00000461118 PLCG1P19174 1290 aa20.23■□□□□ 0.83
COL9A2-205ENST00000461118 CA8P35219 290 aa20.23■□□□□ 0.83
COL9A2-205ENST00000461118 SLC11A1P49279 550 aa20.23■□□□□ 0.83
COL9A2-205ENST00000461118 CLCN5P51795 746 aa20.23■□□□□ 0.83
COL9A2-205ENST00000461118 CEBPZQ03701 1054 aaKnown RBP20.23■□□□□ 0.83
COL9A2-205ENST00000461118 GIT2Q14161 759 aa20.23■□□□□ 0.83
COL9A2-205ENST00000461118 KARSQ15046 597 aaKnown RBP20.23■□□□□ 0.83
COL9A2-205ENST00000461118 TMC5Q6UXY8 1006 aa20.23■□□□□ 0.83
COL9A2-205ENST00000461118 GPR149Q86SP6 731 aa20.23■□□□□ 0.83
COL9A2-205ENST00000461118 EPSTI1Q96J88 318 aa20.23■□□□□ 0.83
COL9A2-205ENST00000461118 TMEM175Q9BSA9 504 aa20.23■□□□□ 0.83
COL9A2-205ENST00000461118 NXF3Q9H4D5 531 aaKnown RBP20.23■□□□□ 0.83
COL9A2-205ENST00000461118 KMT5AQ9NQR1 393 aa20.23■□□□□ 0.83
COL9A2-205ENST00000461118 SFI1A8K8P3 1242 aa20.22■□□□□ 0.83
COL9A2-205ENST00000461118 PI15O43692 258 aa20.22■□□□□ 0.83
COL9A2-205ENST00000461118 ZSCAN22P10073 491 aaPredicted RBP20.22■□□□□ 0.83
COL9A2-205ENST00000461118 PLS3P13797 630 aa20.22■□□□□ 0.83
COL9A2-205ENST00000461118 DDIT3P35638 169 aa20.22■□□□□ 0.83
COL9A2-205ENST00000461118 NT5DC1Q5TFE4 455 aa20.22■□□□□ 0.83
COL9A2-205ENST00000461118 USP49Q70CQ1 688 aa20.22■□□□□ 0.83
COL9A2-205ENST00000461118 RAD54LQ92698 747 aa20.22■□□□□ 0.83
COL9A2-205ENST00000461118 GAD1Q99259 594 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms