RNA–Protein interactions for RNA: ENST00000460547.6

YIPF3-205, Transcript of Yip1 domain family member 3, humanhuman

TSL 1 (best)

Gene YIPF3, Length 1,674 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-205ENST00000460547 PDE2AO00408 941 aaPredicted RBP18.28■□□□□ 0.52
YIPF3-205ENST00000460547 PALMO75781 387 aa18.28■□□□□ 0.52
YIPF3-205ENST00000460547 H2AFZP0C0S5 128 aa18.28■□□□□ 0.52
YIPF3-205ENST00000460547 ARL2P36404 184 aa18.28■□□□□ 0.52
YIPF3-205ENST00000460547 H2AFVQ71UI9 128 aa18.28■□□□□ 0.52
YIPF3-205ENST00000460547 LNX1Q8TBB1 728 aaPredicted RBP18.28■□□□□ 0.52
YIPF3-205ENST00000460547 MORC4Q8TE76 937 aa18.28■□□□□ 0.52
YIPF3-205ENST00000460547 TINF2Q9BSI4 451 aa18.28■□□□□ 0.52
YIPF3-205ENST00000460547 KIAA1586Q9HCI6 787 aa18.28■□□□□ 0.52
YIPF3-205ENST00000460547 STYXL1Q9Y6J8 313 aa18.28■□□□□ 0.52
YIPF3-205ENST00000460547 NCANO14594 1321 aa18.28■□□□□ 0.52
YIPF3-205ENST00000460547 GRID2IPA4D2P6 1211 aa18.27■□□□□ 0.52
YIPF3-205ENST00000460547 HNRNPDLO14979 420 aaKnown RBP18.27■□□□□ 0.52
YIPF3-205ENST00000460547 ZNF185O15231 689 aa18.27■□□□□ 0.52
YIPF3-205ENST00000460547 MSCO60682 206 aa18.27■□□□□ 0.52
YIPF3-205ENST00000460547 ERLIN1O75477 346 aa18.27■□□□□ 0.52
YIPF3-205ENST00000460547 NAP1L1P55209 391 aaKnown RBP18.27■□□□□ 0.52
YIPF3-205ENST00000460547 CYP24A1Q07973 514 aa18.27■□□□□ 0.52
YIPF3-205ENST00000460547 MEI1Q5TIA1 1274 aa18.27■□□□□ 0.52
YIPF3-205ENST00000460547 KRT39Q6A163 491 aa18.27■□□□□ 0.52
YIPF3-205ENST00000460547 NFRKBQ6P4R8 1299 aa18.27■□□□□ 0.52
YIPF3-205ENST00000460547 KRT222Q8N1A0 295 aa18.27■□□□□ 0.52
YIPF3-205ENST00000460547 GPD1LQ8N335 351 aa18.27■□□□□ 0.52
YIPF3-205ENST00000460547 ANKLE1Q8NAG6 615 aa18.27■□□□□ 0.52
YIPF3-205ENST00000460547 COG1Q8WTW3 980 aa18.27■□□□□ 0.52
YIPF3-205ENST00000460547 SLC7A3Q8WY07 619 aa18.27■□□□□ 0.52
YIPF3-205ENST00000460547 SEPT1Q8WYJ6 367 aa18.27■□□□□ 0.52
YIPF3-205ENST00000460547 POMGNT1Q8WZA1 660 aa18.27■□□□□ 0.52
YIPF3-205ENST00000460547 FAM167AQ96KS9 214 aa18.27■□□□□ 0.52
YIPF3-205ENST00000460547 ARID3AQ99856 593 aa18.27■□□□□ 0.52
YIPF3-205ENST00000460547 NRBP2Q9NSY0 501 aa18.27■□□□□ 0.52
YIPF3-205ENST00000460547 GOLGA8IPA6NC78 632 aa18.26■□□□□ 0.51
YIPF3-205ENST00000460547 GOLGA8JA6NMD2 632 aa18.26■□□□□ 0.51
YIPF3-205ENST00000460547 CES2O00748 559 aa18.26■□□□□ 0.51
YIPF3-205ENST00000460547 SORBS3O60504 671 aa18.26■□□□□ 0.51
YIPF3-205ENST00000460547 RHOXF2BP0C7M4 288 aa18.26■□□□□ 0.51
YIPF3-205ENST00000460547 MCM3P25205 808 aa18.26■□□□□ 0.51
YIPF3-205ENST00000460547 GPC3P51654 580 aa18.26■□□□□ 0.51
YIPF3-205ENST00000460547 PRAMEF19Q5SWL8 479 aa18.26■□□□□ 0.51
YIPF3-205ENST00000460547 ARHGEF19Q8IW93 802 aa18.26■□□□□ 0.51
YIPF3-205ENST00000460547 MMGT1Q8N4V1 131 aa18.26■□□□□ 0.51
YIPF3-205ENST00000460547 LRRC57Q8N9N7 239 aa18.26■□□□□ 0.51
YIPF3-205ENST00000460547 RUBCNQ92622 972 aa18.26■□□□□ 0.51
YIPF3-205ENST00000460547 SAAL1Q96ER3 474 aa18.26■□□□□ 0.51
YIPF3-205ENST00000460547 RHOXF2Q9BQY4 288 aa18.26■□□□□ 0.51
YIPF3-205ENST00000460547 DDX20Q9UHI6 824 aaKnown RBP18.26■□□□□ 0.51
YIPF3-205ENST00000460547 BRCA2P51587 3418 aa18.26■□□□□ 0.51
YIPF3-205ENST00000460547 MYH9P35579 1960 aaKnown RBP18.26■□□□□ 0.51
YIPF3-205ENST00000460547 SPDYE4A6NLX3 237 aa18.25■□□□□ 0.51
YIPF3-205ENST00000460547 LRRIQ3A6PVS8 624 aaPredicted RBP18.25■□□□□ 0.51
YIPF3-205ENST00000460547 GGPS1O95749 300 aa18.25■□□□□ 0.51
YIPF3-205ENST00000460547 IGHA2P01877 340 aa18.25■□□□□ 0.51
YIPF3-205ENST00000460547 CYBAP13498 195 aa18.25■□□□□ 0.51
YIPF3-205ENST00000460547 GLRA2P23416 452 aa18.25■□□□□ 0.51
YIPF3-205ENST00000460547 MSL3Q8N5Y2 521 aaKnown RBP18.25■□□□□ 0.51
YIPF3-205ENST00000460547 UBE2TQ9NPD8 197 aaPredicted RBP18.25■□□□□ 0.51
YIPF3-205ENST00000460547 OGDHLQ9ULD0 1010 aa18.25■□□□□ 0.51
YIPF3-205ENST00000460547 FOXN3O00409 490 aaPredicted RBP18.25■□□□□ 0.51
YIPF3-205ENST00000460547 NCK2O43639 380 aa18.25■□□□□ 0.51
YIPF3-205ENST00000460547 EXTL3O43909 919 aa18.25■□□□□ 0.51
YIPF3-205ENST00000460547 LGR5O75473 907 aa18.25■□□□□ 0.51
YIPF3-205ENST00000460547 SEC31AO94979 1220 aaKnown RBP18.25■□□□□ 0.51
YIPF3-205ENST00000460547 TMEM253P0C7T8 217 aa18.25■□□□□ 0.51
YIPF3-205ENST00000460547 STAT5BP51692 787 aa18.25■□□□□ 0.51
YIPF3-205ENST00000460547 STRN3Q13033 797 aa18.25■□□□□ 0.51
YIPF3-205ENST00000460547 LONRF2Q1L5Z9 754 aa18.25■□□□□ 0.51
YIPF3-205ENST00000460547 LHX8Q68G74 356 aa18.25■□□□□ 0.51
YIPF3-205ENST00000460547 GLYCTKQ8IVS8 523 aa18.25■□□□□ 0.51
YIPF3-205ENST00000460547 ASAP3Q8TDY4 903 aa18.25■□□□□ 0.51
YIPF3-205ENST00000460547 BICD1Q96G01 975 aa18.25■□□□□ 0.51
YIPF3-205ENST00000460547 HTATIP2Q9BUP3 242 aa18.25■□□□□ 0.51
YIPF3-205ENST00000460547 ZNF236Q9UL36 1845 aa18.25■□□□□ 0.51
YIPF3-205ENST00000460547 GAS2O43903 313 aaKnown RBP18.24■□□□□ 0.51
YIPF3-205ENST00000460547 MAFO75444 373 aaPredicted RBP18.24■□□□□ 0.51
YIPF3-205ENST00000460547 TCF7P36402 384 aaPredicted RBP18.24■□□□□ 0.51
YIPF3-205ENST00000460547 LIG4P49917 911 aa18.24■□□□□ 0.51
YIPF3-205ENST00000460547 VSNL1P62760 191 aa18.24■□□□□ 0.51
YIPF3-205ENST00000460547 CLDN10P78369 228 aa18.24■□□□□ 0.51
YIPF3-205ENST00000460547 ARHGAP44Q17R89 818 aa18.24■□□□□ 0.51
YIPF3-205ENST00000460547 NECAB2Q7Z6G3 386 aa18.24■□□□□ 0.51
YIPF3-205ENST00000460547 SLFN11Q7Z7L1 901 aa18.24■□□□□ 0.51
YIPF3-205ENST00000460547 TRPV1Q8NER1 839 aa18.24■□□□□ 0.51
YIPF3-205ENST00000460547 DEPTORQ8TB45 409 aa18.24■□□□□ 0.51
YIPF3-205ENST00000460547 SHC3Q92529 594 aa18.24■□□□□ 0.51
YIPF3-205ENST00000460547 TMEM143Q96AN5 459 aa18.24■□□□□ 0.51
YIPF3-205ENST00000460547 PAWRQ96IZ0 340 aaKnown RBP18.24■□□□□ 0.51
YIPF3-205ENST00000460547 TMEM134Q9H6X4 195 aa18.24■□□□□ 0.51
YIPF3-205ENST00000460547 ZNF233A6NK53 670 aa18.23■□□□□ 0.51
YIPF3-205ENST00000460547 SEPT4O43236 478 aa18.23■□□□□ 0.51
YIPF3-205ENST00000460547 ZC3H11AO75152 810 aaKnown RBP eCLIP18.23■□□□□ 0.51
YIPF3-205ENST00000460547 PAFAH1B1P43034 410 aa18.23■□□□□ 0.51
YIPF3-205ENST00000460547 GALCP54803 685 aa18.23■□□□□ 0.51
YIPF3-205ENST00000460547 BEND6Q5SZJ8 279 aaPredicted RBP18.23■□□□□ 0.51
YIPF3-205ENST00000460547 CELF3Q5SZQ8 465 aaKnown RBP18.23■□□□□ 0.51
YIPF3-205ENST00000460547 CCDC181Q5TID7 509 aa18.23■□□□□ 0.51
YIPF3-205ENST00000460547 SLFN12LQ6IEE8 588 aa18.23■□□□□ 0.51
YIPF3-205ENST00000460547 ZNF467Q7Z7K2 595 aaPredicted RBP18.23■□□□□ 0.51
YIPF3-205ENST00000460547 FAM71AQ8IYT1 594 aa18.23■□□□□ 0.51
YIPF3-205ENST00000460547 FBXL13Q8NEE6 735 aa18.23■□□□□ 0.51
YIPF3-205ENST00000460547 SPATA4Q8NEY3 305 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms