RNA–Protein interactions for RNA: ENST00000460509.1

VBP1-202, Transcript of VHL binding protein 1, humanhuman

TSL 2

Gene VBP1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-202ENST00000460509 HDAC5Q9UQL6 1122 aa6.11□□□□□ -1.43
VBP1-202ENST00000460509 RUVBL1Q9Y265 456 aaKnown RBP6.11□□□□□ -1.43
VBP1-202ENST00000460509 MSX2P35548 267 aaPredicted RBP6.1□□□□□ -1.43
VBP1-202ENST00000460509 GFOD2Q3B7J2 385 aa6.1□□□□□ -1.43
VBP1-202ENST00000460509 FKBP15Q5T1M5 1219 aa6.1□□□□□ -1.43
VBP1-202ENST00000460509 TCTN3Q6NUS6 607 aa6.1□□□□□ -1.43
VBP1-202ENST00000460509 GADL1Q6ZQY3 521 aa6.1□□□□□ -1.43
VBP1-202ENST00000460509 XYLT1Q86Y38 959 aa6.1□□□□□ -1.43
VBP1-202ENST00000460509 FUKQ8N0W3 1084 aa6.1□□□□□ -1.43
VBP1-202ENST00000460509 D2HGDHQ8N465 521 aa6.1□□□□□ -1.43
VBP1-202ENST00000460509 TTC8Q8TAM2 541 aa6.1□□□□□ -1.43
VBP1-202ENST00000460509 CYFIP2Q96F07 1278 aa6.1□□□□□ -1.43
VBP1-202ENST00000460509 ZNF512Q96ME7 567 aaPredicted RBP6.1□□□□□ -1.43
VBP1-202ENST00000460509 BDH2Q9BUT1 245 aa6.1□□□□□ -1.43
VBP1-202ENST00000460509 PLA2G3Q9NZ20 509 aa6.1□□□□□ -1.43
VBP1-202ENST00000460509 PCDHB1Q9Y5F3 818 aa6.1□□□□□ -1.43
VBP1-202ENST00000460509 CFAP20Q9Y6A4 193 aaKnown RBP6.1□□□□□ -1.43
VBP1-202ENST00000460509 A0A0G2JLL6 359 aaPredicted RBP6.09□□□□□ -1.43
VBP1-202ENST00000460509 PMS2P1A4D2B8 440 aa6.09□□□□□ -1.43
VBP1-202ENST00000460509 VSTM5A8MXK1 200 aa6.09□□□□□ -1.43
VBP1-202ENST00000460509 GPR42O15529 346 aa6.09□□□□□ -1.43
VBP1-202ENST00000460509 HOXA3O43365 443 aaPredicted RBP6.09□□□□□ -1.43
VBP1-202ENST00000460509 CTNND1O60716 968 aaKnown RBP6.09□□□□□ -1.43
VBP1-202ENST00000460509 GPR32O75388 356 aa6.09□□□□□ -1.43
VBP1-202ENST00000460509 IL2RBP14784 551 aa6.09□□□□□ -1.43
VBP1-202ENST00000460509 DDCP20711 480 aa6.09□□□□□ -1.43
VBP1-202ENST00000460509 CDC42EP1Q00587 391 aa6.09□□□□□ -1.43
VBP1-202ENST00000460509 MRPL49Q13405 166 aaKnown RBP6.09□□□□□ -1.43
VBP1-202ENST00000460509 ATAT1Q5SQI0 421 aa6.09□□□□□ -1.43
VBP1-202ENST00000460509 TTC7BQ86TV6 843 aa6.09□□□□□ -1.43
VBP1-202ENST00000460509 SLC35G2Q8TBE7 412 aa6.09□□□□□ -1.43
VBP1-202ENST00000460509 CEP95Q96GE4 821 aa6.09□□□□□ -1.43
VBP1-202ENST00000460509 CPPED1Q9BRF8 314 aaPredicted RBP6.09□□□□□ -1.43
VBP1-202ENST00000460509 SLC12A5Q9H2X9 1139 aa6.09□□□□□ -1.43
VBP1-202ENST00000460509 MOCS1Q9NZB8 636 aa6.09□□□□□ -1.43
VBP1-202ENST00000460509 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.09□□□□□ -1.43
VBP1-202ENST00000460509 ACTL7AQ9Y615 435 aa6.09□□□□□ -1.43
VBP1-202ENST00000460509 LRRC14BA6NHZ5 514 aa6.08□□□□□ -1.44
VBP1-202ENST00000460509 FOXS1O43638 330 aa6.08□□□□□ -1.44
VBP1-202ENST00000460509 RAD17O75943 681 aa6.08□□□□□ -1.44
VBP1-202ENST00000460509 FTLP02792 175 aaPredicted RBP6.08□□□□□ -1.44
VBP1-202ENST00000460509 AMY1AP04745 511 aa6.08□□□□□ -1.44
VBP1-202ENST00000460509 GNAT2P19087 354 aa6.08□□□□□ -1.44
VBP1-202ENST00000460509 FPR1P21462 350 aa6.08□□□□□ -1.44
VBP1-202ENST00000460509 RAP2BP61225 183 aa6.08□□□□□ -1.44
VBP1-202ENST00000460509 HHEXQ03014 270 aa6.08□□□□□ -1.44
VBP1-202ENST00000460509 PTH1RQ03431 593 aa6.08□□□□□ -1.44
VBP1-202ENST00000460509 FOXL1Q12952 345 aa6.08□□□□□ -1.44
VBP1-202ENST00000460509 TARDBPQ13148 414 aaKnown RBP eCLIP6.08□□□□□ -1.44
VBP1-202ENST00000460509 NFIXQ14938 502 aa6.08□□□□□ -1.44
VBP1-202ENST00000460509 ELAVL1Q15717 326 aaKnown RBP6.08□□□□□ -1.44
VBP1-202ENST00000460509 MFSD14BQ5SR56 506 aa6.08□□□□□ -1.44
VBP1-202ENST00000460509 AFMIDQ63HM1 303 aa6.08□□□□□ -1.44
VBP1-202ENST00000460509 KRTAP5-3Q6L8H2 238 aa6.08□□□□□ -1.44
VBP1-202ENST00000460509 SGMS1Q86VZ5 419 aa6.08□□□□□ -1.44
VBP1-202ENST00000460509 ELOA2Q8IYF1 753 aaPredicted RBP6.08□□□□□ -1.44
VBP1-202ENST00000460509 PRR18Q8N4B5 295 aa6.08□□□□□ -1.44
VBP1-202ENST00000460509 ZGPATQ8N5A5 531 aaKnown RBP6.08□□□□□ -1.44
VBP1-202ENST00000460509 MB21D1Q8N884 522 aa6.08□□□□□ -1.44
VBP1-202ENST00000460509 DIS3LQ8TF46 1054 aaKnown RBP6.08□□□□□ -1.44
VBP1-202ENST00000460509 ACO2Q99798 780 aaKnown RBP6.08□□□□□ -1.44
VBP1-202ENST00000460509 VRK1Q99986 396 aaPredicted RBP6.08□□□□□ -1.44
VBP1-202ENST00000460509 ENKD1Q9H0I2 346 aa6.08□□□□□ -1.44
VBP1-202ENST00000460509 SPON1Q9HCB6 807 aa6.08□□□□□ -1.44
VBP1-202ENST00000460509 KMT5AQ9NQR1 393 aa6.08□□□□□ -1.44
VBP1-202ENST00000460509 SH3BP1Q9Y3L3 701 aa6.08□□□□□ -1.44
VBP1-202ENST00000460509 MFAP3LO75121 409 aa6.07□□□□□ -1.44
VBP1-202ENST00000460509 PCSK1P29120 753 aa6.07□□□□□ -1.44
VBP1-202ENST00000460509 ALDH1A3P47895 512 aa6.07□□□□□ -1.44
VBP1-202ENST00000460509 DSC2Q02487 901 aa6.07□□□□□ -1.44
VBP1-202ENST00000460509 CREMQ03060 361 aa6.07□□□□□ -1.44
VBP1-202ENST00000460509 PLP2Q04941 152 aa6.07□□□□□ -1.44
VBP1-202ENST00000460509 DUSP8Q13202 625 aa6.07□□□□□ -1.44
VBP1-202ENST00000460509 KHDC1Q4VXA5 237 aaKnown RBP6.07□□□□□ -1.44
VBP1-202ENST00000460509 FAM47AQ5JRC9 791 aa6.07□□□□□ -1.44
VBP1-202ENST00000460509 THEMIS2Q5TEJ8 643 aa6.07□□□□□ -1.44
VBP1-202ENST00000460509 ANKS6Q68DC2 871 aa6.07□□□□□ -1.44
VBP1-202ENST00000460509 MFSD5Q6N075 450 aa6.07□□□□□ -1.44
VBP1-202ENST00000460509 PPP4R4Q6NUP7 873 aa6.07□□□□□ -1.44
VBP1-202ENST00000460509 NOL8Q76FK4 1167 aaKnown RBP6.07□□□□□ -1.44
VBP1-202ENST00000460509 ZNF572Q7Z3I7 529 aaPredicted RBP6.07□□□□□ -1.44
VBP1-202ENST00000460509 SH2D3CQ8N5H7 860 aa6.07□□□□□ -1.44
VBP1-202ENST00000460509 PPP1R35Q8TAP8 253 aa6.07□□□□□ -1.44
VBP1-202ENST00000460509 RGMAQ96B86 450 aa6.07□□□□□ -1.44
VBP1-202ENST00000460509 C1GALT1C1Q96EU7 318 aa6.07□□□□□ -1.44
VBP1-202ENST00000460509 LOXL4Q96JB6 756 aa6.07□□□□□ -1.44
VBP1-202ENST00000460509 TAAR9Q96RI9 348 aa6.07□□□□□ -1.44
VBP1-202ENST00000460509 MSL2Q9HCI7 577 aa6.07□□□□□ -1.44
VBP1-202ENST00000460509 PCDHA3Q9Y5H8 950 aa6.07□□□□□ -1.44
VBP1-202ENST00000460509 CAPN14A8MX76 684 aa6.06□□□□□ -1.44
VBP1-202ENST00000460509 WNT10BO00744 389 aa6.06□□□□□ -1.44
VBP1-202ENST00000460509 SGTAO43765 313 aa6.06□□□□□ -1.44
VBP1-202ENST00000460509 ALDH2P05091 517 aa6.06□□□□□ -1.44
VBP1-202ENST00000460509 HK1P19367 917 aa6.06□□□□□ -1.44
VBP1-202ENST00000460509 SMARCA1P28370 1054 aa6.06□□□□□ -1.44
VBP1-202ENST00000460509 GUCY1A2P33402 732 aa6.06□□□□□ -1.44
VBP1-202ENST00000460509 FLT3LGP49771 235 aa6.06□□□□□ -1.44
VBP1-202ENST00000460509 CTSWP56202 376 aa6.06□□□□□ -1.44
VBP1-202ENST00000460509 ZNF280AP59817 542 aaPredicted RBP6.06□□□□□ -1.44
VBP1-202ENST00000460509 SP140Q13342 867 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 318.4 ms