RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 MAPTP10636 758 aaKnown RBP16.39■□□□□ 0.21
ATG4B-213ENST00000460211 SLC11A1P49279 550 aa16.39■□□□□ 0.21
ATG4B-213ENST00000460211 SCNN1GP51170 649 aa16.39■□□□□ 0.21
ATG4B-213ENST00000460211 AFF1P51825 1210 aaKnown RBP16.39■□□□□ 0.21
ATG4B-213ENST00000460211 ZNF131P52739 623 aa16.39■□□□□ 0.21
ATG4B-213ENST00000460211 DNM1Q05193 864 aaKnown RBP16.39■□□□□ 0.21
ATG4B-213ENST00000460211 SMAD2Q15796 467 aaKnown RBP16.39■□□□□ 0.21
ATG4B-213ENST00000460211 CTC1Q2NKJ3 1217 aa16.39■□□□□ 0.21
ATG4B-213ENST00000460211 ZNF568Q3ZCX4 644 aa16.39■□□□□ 0.21
ATG4B-213ENST00000460211 EEF1DP3Q658K8 133 aa16.39■□□□□ 0.21
ATG4B-213ENST00000460211 HAUS6Q7Z4H7 955 aa16.39■□□□□ 0.21
ATG4B-213ENST00000460211 ZNF280BQ86YH2 543 aa16.39■□□□□ 0.21
ATG4B-213ENST00000460211 LRRC15Q8TF66 581 aa16.39■□□□□ 0.21
ATG4B-213ENST00000460211 IGSF21Q96ID5 467 aa16.39■□□□□ 0.21
ATG4B-213ENST00000460211 ZFP42Q96MM3 310 aa16.39■□□□□ 0.21
ATG4B-213ENST00000460211 TCF25Q9BQ70 676 aa16.39■□□□□ 0.21
ATG4B-213ENST00000460211 CCDC94Q9BW85 323 aaPredicted RBP16.39■□□□□ 0.21
ATG4B-213ENST00000460211 TARS2Q9BW92 718 aaKnown RBP16.39■□□□□ 0.21
ATG4B-213ENST00000460211 TLE6Q9H808 572 aa16.39■□□□□ 0.21
ATG4B-213ENST00000460211 SNTG2Q9NY99 539 aa16.39■□□□□ 0.21
ATG4B-213ENST00000460211 FAM13BQ9NYF5 915 aa16.39■□□□□ 0.21
ATG4B-213ENST00000460211 KLK14Q9P0G3 267 aa16.39■□□□□ 0.21
ATG4B-213ENST00000460211 USP20Q9Y2K6 914 aa16.39■□□□□ 0.21
ATG4B-213ENST00000460211 K7ENM7 598 aa16.38■□□□□ 0.21
ATG4B-213ENST00000460211 DDHD2O94830 711 aa16.38■□□□□ 0.21
ATG4B-213ENST00000460211 MCF2P10911 925 aa16.38■□□□□ 0.21
ATG4B-213ENST00000460211 OR1G1P47890 313 aa16.38■□□□□ 0.21
ATG4B-213ENST00000460211 YARSP54577 528 aaKnown RBP16.38■□□□□ 0.21
ATG4B-213ENST00000460211 NCKAP1LP55160 1127 aa16.38■□□□□ 0.21
ATG4B-213ENST00000460211 KRT85P78386 507 aa16.38■□□□□ 0.21
ATG4B-213ENST00000460211 GRIK3Q13003 919 aa16.38■□□□□ 0.21
ATG4B-213ENST00000460211 MPZL3Q6UWV2 235 aa16.38■□□□□ 0.21
ATG4B-213ENST00000460211 ZPBP2Q6X784 338 aa16.38■□□□□ 0.21
ATG4B-213ENST00000460211 DYMQ7RTS9 669 aa16.38■□□□□ 0.21
ATG4B-213ENST00000460211 RNF135Q8IUD6 432 aa16.38■□□□□ 0.21
ATG4B-213ENST00000460211 PDILTQ8N807 584 aa16.38■□□□□ 0.21
ATG4B-213ENST00000460211 IQUBQ8NA54 791 aa16.38■□□□□ 0.21
ATG4B-213ENST00000460211 TMEM87AQ8NBN3 555 aa16.38■□□□□ 0.21
ATG4B-213ENST00000460211 DDX12PQ92771 950 aa16.38■□□□□ 0.21
ATG4B-213ENST00000460211 BICD1Q96G01 975 aa16.38■□□□□ 0.21
ATG4B-213ENST00000460211 CDCA3Q99618 268 aaPredicted RBP16.38■□□□□ 0.21
ATG4B-213ENST00000460211 COLEC11Q9BWP8 271 aa16.38■□□□□ 0.21
ATG4B-213ENST00000460211 CUEDC2Q9H467 287 aa16.38■□□□□ 0.21
ATG4B-213ENST00000460211 TOPORSQ9NS56 1045 aaPredicted RBP16.38■□□□□ 0.21
ATG4B-213ENST00000460211 DNAJB4Q9UDY4 337 aa16.38■□□□□ 0.21
ATG4B-213ENST00000460211 RCOR1Q9UKL0 485 aa16.38■□□□□ 0.21
ATG4B-213ENST00000460211 GDAQ9Y2T3 454 aa16.38■□□□□ 0.21
ATG4B-213ENST00000460211 KIAA1671Q9BY89 1806 aa16.38■□□□□ 0.21
ATG4B-213ENST00000460211 NRP1O14786 923 aa16.37■□□□□ 0.21
ATG4B-213ENST00000460211 FSCN2O14926 492 aa16.37■□□□□ 0.21
ATG4B-213ENST00000460211 TOM1L1O75674 476 aa16.37■□□□□ 0.21
ATG4B-213ENST00000460211 RECQL4O94761 1208 aa16.37■□□□□ 0.21
ATG4B-213ENST00000460211 EDN1P05305 212 aa16.37■□□□□ 0.21
ATG4B-213ENST00000460211 MATR3P43243 847 aaKnown RBP eCLIP16.37■□□□□ 0.21
ATG4B-213ENST00000460211 ERVFC1P60507 584 aa16.37■□□□□ 0.21
ATG4B-213ENST00000460211 AMPD3Q01432 767 aa16.37■□□□□ 0.21
ATG4B-213ENST00000460211 SMC1AQ14683 1233 aaKnown RBP16.37■□□□□ 0.21
ATG4B-213ENST00000460211 PLPP4Q5VZY2 271 aa16.37■□□□□ 0.21
ATG4B-213ENST00000460211 TAS1R3Q7RTX0 852 aa16.37■□□□□ 0.21
ATG4B-213ENST00000460211 ZBTB33Q86T24 672 aa16.37■□□□□ 0.21
ATG4B-213ENST00000460211 DDX53Q86TM3 631 aaKnown RBP16.37■□□□□ 0.21
ATG4B-213ENST00000460211 COLGALT2Q8IYK4 626 aa16.37■□□□□ 0.21
ATG4B-213ENST00000460211 VPS52Q8N1B4 723 aa16.37■□□□□ 0.21
ATG4B-213ENST00000460211 KCNN1Q92952 543 aa16.37■□□□□ 0.21
ATG4B-213ENST00000460211 POP1Q99575 1024 aaKnown RBP16.37■□□□□ 0.21
ATG4B-213ENST00000460211 PYM1Q9BRP8 204 aaKnown RBP16.37■□□□□ 0.21
ATG4B-213ENST00000460211 MIOSQ9NXC5 875 aa16.37■□□□□ 0.21
ATG4B-213ENST00000460211 SEL1LQ9UBV2 794 aa16.37■□□□□ 0.21
ATG4B-213ENST00000460211 CD207Q9UJ71 328 aa16.37■□□□□ 0.21
ATG4B-213ENST00000460211 ZNF318Q5VUA4 2279 aa16.36■□□□□ 0.21
ATG4B-213ENST00000460211 MYMKA6NI61 221 aa16.36■□□□□ 0.21
ATG4B-213ENST00000460211 CLDN3O15551 220 aa16.36■□□□□ 0.21
ATG4B-213ENST00000460211 THP07101 528 aa16.36■□□□□ 0.21
ATG4B-213ENST00000460211 GAP43P17677 238 aa16.36■□□□□ 0.21
ATG4B-213ENST00000460211 CA8P35219 290 aa16.36■□□□□ 0.21
ATG4B-213ENST00000460211 GRM5P41594 1212 aa16.36■□□□□ 0.21
ATG4B-213ENST00000460211 NRIP1P48552 1158 aa16.36■□□□□ 0.21
ATG4B-213ENST00000460211 NDUFV1P49821 464 aa16.36■□□□□ 0.21
ATG4B-213ENST00000460211 DSC1Q08554 894 aa16.36■□□□□ 0.21
ATG4B-213ENST00000460211 SMAD4Q13485 552 aaKnown RBP16.36■□□□□ 0.21
ATG4B-213ENST00000460211 RBM23Q86U06 439 aaKnown RBP16.36■□□□□ 0.21
ATG4B-213ENST00000460211 EFHBQ8N7U6 833 aa16.36■□□□□ 0.21
ATG4B-213ENST00000460211 MFSD14AQ96MC6 490 aa16.36■□□□□ 0.21
ATG4B-213ENST00000460211 ACAP3Q96P50 834 aa16.36■□□□□ 0.21
ATG4B-213ENST00000460211 PHOX2BQ99453 314 aa16.36■□□□□ 0.21
ATG4B-213ENST00000460211 CDT1Q9H211 546 aa16.36■□□□□ 0.21
ATG4B-213ENST00000460211 KCNH6Q9H252 994 aa16.36■□□□□ 0.21
ATG4B-213ENST00000460211 PTPRHQ9HD43 1115 aa16.36■□□□□ 0.21
ATG4B-213ENST00000460211 ANKFY1Q9P2R3 1169 aa16.36■□□□□ 0.21
ATG4B-213ENST00000460211 TBX20Q9UMR3 447 aa16.36■□□□□ 0.21
ATG4B-213ENST00000460211 PCDHA7Q9UN72 937 aa16.36■□□□□ 0.21
ATG4B-213ENST00000460211 PRG3Q9Y2Y8 225 aaPredicted RBP16.36■□□□□ 0.21
ATG4B-213ENST00000460211 CXCL14O95715 111 aa16.35■□□□□ 0.21
ATG4B-213ENST00000460211 SRGAP2BP0DMP2 458 aa16.35■□□□□ 0.21
ATG4B-213ENST00000460211 IDEP14735 1019 aa16.35■□□□□ 0.21
ATG4B-213ENST00000460211 PROZP22891 400 aa16.35■□□□□ 0.21
ATG4B-213ENST00000460211 LIG4P49917 911 aa16.35■□□□□ 0.21
ATG4B-213ENST00000460211 TUSC3Q13454 348 aa16.35■□□□□ 0.21
ATG4B-213ENST00000460211 NOLC1Q14978 699 aaKnown RBP eCLIP16.35■□□□□ 0.21
ATG4B-213ENST00000460211 KYAT1Q16773 422 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms