RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 INTS4Q96HW7 963 aaKnown RBP11.02□□□□□ -0.65
HDLBP-228ENST00000459788 ZFP42Q96MM3 310 aa11.02□□□□□ -0.65
HDLBP-228ENST00000459788 UROC1Q96N76 676 aa11.02□□□□□ -0.65
HDLBP-228ENST00000459788 MMTAG2Q9BU76 263 aaKnown RBP11.02□□□□□ -0.65
HDLBP-228ENST00000459788 PLEKHA4Q9H4M7 779 aa11.02□□□□□ -0.65
HDLBP-228ENST00000459788 MIOSQ9NXC5 875 aa11.02□□□□□ -0.65
HDLBP-228ENST00000459788 ARHGAP28Q9P2N2 729 aa11.02□□□□□ -0.65
HDLBP-228ENST00000459788 PARP2Q9UGN5 583 aa11.02□□□□□ -0.65
HDLBP-228ENST00000459788 ADAM28Q9UKQ2 775 aa11.02□□□□□ -0.65
HDLBP-228ENST00000459788 HES2Q9Y543 173 aa11.02□□□□□ -0.65
HDLBP-228ENST00000459788 MORC2Q9Y6X9 1032 aaPredicted RBP11.02□□□□□ -0.65
HDLBP-228ENST00000459788 A0A087WWV3 80 aa11.01□□□□□ -0.65
HDLBP-228ENST00000459788 TMEM189-UBE2V1I3L0A0 370 aa11.01□□□□□ -0.65
HDLBP-228ENST00000459788 CD2BP2O95400 341 aaKnown RBP11.01□□□□□ -0.65
HDLBP-228ENST00000459788 CNPP09543 421 aaKnown RBP11.01□□□□□ -0.65
HDLBP-228ENST00000459788 PDIA4P13667 645 aaKnown RBP11.01□□□□□ -0.65
HDLBP-228ENST00000459788 KLRC2P26717 231 aa11.01□□□□□ -0.65
HDLBP-228ENST00000459788 LONP1P36776 959 aaKnown RBP11.01□□□□□ -0.65
HDLBP-228ENST00000459788 NPTX2P47972 431 aa11.01□□□□□ -0.65
HDLBP-228ENST00000459788 SMTNP53814 917 aa11.01□□□□□ -0.65
HDLBP-228ENST00000459788 RBM10P98175 930 aaKnown RBP11.01□□□□□ -0.65
HDLBP-228ENST00000459788 HSP90AA2PQ14568 343 aaPredicted RBP11.01□□□□□ -0.65
HDLBP-228ENST00000459788 IL17AQ16552 155 aa11.01□□□□□ -0.65
HDLBP-228ENST00000459788 TMEM132AQ24JP5 1023 aa11.01□□□□□ -0.65
HDLBP-228ENST00000459788 ATF7IP2Q5U623 682 aa11.01□□□□□ -0.65
HDLBP-228ENST00000459788 LLGL2Q6P1M3 1020 aa11.01□□□□□ -0.65
HDLBP-228ENST00000459788 RTL10Q7L3V2 364 aa11.01□□□□□ -0.65
HDLBP-228ENST00000459788 GPR149Q86SP6 731 aa11.01□□□□□ -0.65
HDLBP-228ENST00000459788 CABP7Q86V35 215 aa11.01□□□□□ -0.65
HDLBP-228ENST00000459788 ZDHHC14Q8IZN3 488 aa11.01□□□□□ -0.65
HDLBP-228ENST00000459788 CDK5RAP3Q96JB5 506 aa11.01□□□□□ -0.65
HDLBP-228ENST00000459788 MFSD14AQ96MC6 490 aa11.01□□□□□ -0.65
HDLBP-228ENST00000459788 FBXL18Q96ME1 805 aa11.01□□□□□ -0.65
HDLBP-228ENST00000459788 MRPL4Q9BYD3 311 aaKnown RBP11.01□□□□□ -0.65
HDLBP-228ENST00000459788 TOPORSQ9NS56 1045 aaPredicted RBP11.01□□□□□ -0.65
HDLBP-228ENST00000459788 SF3B1O75533 1304 aaKnown RBP eCLIP11.01□□□□□ -0.657e-19■■■■■ 224
HDLBP-228ENST00000459788 E9PMD0 336 aa11□□□□□ -0.65
HDLBP-228ENST00000459788 HIP1RO75146 1068 aa11□□□□□ -0.65
HDLBP-228ENST00000459788 RECQL4O94761 1208 aa11□□□□□ -0.65
HDLBP-228ENST00000459788 GLUD1P00367 558 aa11□□□□□ -0.65
HDLBP-228ENST00000459788 MCF2P10911 925 aa11□□□□□ -0.65
HDLBP-228ENST00000459788 EPCAMP16422 314 aa11□□□□□ -0.65
HDLBP-228ENST00000459788 PROZP22891 400 aa11□□□□□ -0.65
HDLBP-228ENST00000459788 AKAP5P24588 427 aa11□□□□□ -0.65
HDLBP-228ENST00000459788 CA8P35219 290 aa11□□□□□ -0.65
HDLBP-228ENST00000459788 GRM5P41594 1212 aa11□□□□□ -0.65
HDLBP-228ENST00000459788 ZXDAP98168 799 aa11□□□□□ -0.65
HDLBP-228ENST00000459788 SIGLEC14Q08ET2 396 aa11□□□□□ -0.65
HDLBP-228ENST00000459788 MAPK7Q13164 816 aa11□□□□□ -0.65
HDLBP-228ENST00000459788 NAB2Q15742 525 aa11□□□□□ -0.65
HDLBP-228ENST00000459788 KYAT1Q16773 422 aa11□□□□□ -0.65
HDLBP-228ENST00000459788 PTPN21Q16825 1174 aa11□□□□□ -0.65
HDLBP-228ENST00000459788 TMEM119Q4V9L6 283 aa11□□□□□ -0.65
HDLBP-228ENST00000459788 XKR4Q5GH76 650 aa11□□□□□ -0.65
HDLBP-228ENST00000459788 FUT10Q6P4F1 479 aa11□□□□□ -0.65
HDLBP-228ENST00000459788 ZPBP2Q6X784 338 aa11□□□□□ -0.65
HDLBP-228ENST00000459788 UBALD2Q8IYN6 164 aa11□□□□□ -0.65
HDLBP-228ENST00000459788 DAW1Q8N136 415 aa11□□□□□ -0.65
HDLBP-228ENST00000459788 CALML4Q96GE6 196 aa11□□□□□ -0.65
HDLBP-228ENST00000459788 TSPAN18Q96SJ8 248 aa11□□□□□ -0.65
HDLBP-228ENST00000459788 ACO2Q99798 780 aaKnown RBP11□□□□□ -0.65
HDLBP-228ENST00000459788 PRRX2Q99811 253 aa11□□□□□ -0.65
HDLBP-228ENST00000459788 CCDC94Q9BW85 323 aaPredicted RBP11□□□□□ -0.65
HDLBP-228ENST00000459788 APOL6Q9BWW8 343 aa11□□□□□ -0.65
HDLBP-228ENST00000459788 PTPRHQ9HD43 1115 aa11□□□□□ -0.65
HDLBP-228ENST00000459788 KMT5AQ9NQR1 393 aa11□□□□□ -0.65
HDLBP-228ENST00000459788 SLC38A7Q9NVC3 462 aa11□□□□□ -0.65
HDLBP-228ENST00000459788 SNTG2Q9NY99 539 aa11□□□□□ -0.65
HDLBP-228ENST00000459788 LARSQ9P2J5 1176 aaKnown RBP11□□□□□ -0.65
HDLBP-228ENST00000459788 MUTYHQ9UIF7 546 aa11□□□□□ -0.65
HDLBP-228ENST00000459788 ODF2LQ9ULJ1 636 aa11□□□□□ -0.65
HDLBP-228ENST00000459788 PRG3Q9Y2Y8 225 aaPredicted RBP11□□□□□ -0.65
HDLBP-228ENST00000459788 VWA3AA6NCI4 1184 aa10.99□□□□□ -0.65
HDLBP-228ENST00000459788 CCDC169A6NNP5 214 aa10.99□□□□□ -0.65
HDLBP-228ENST00000459788 PTGESO14684 152 aa10.99□□□□□ -0.65
HDLBP-228ENST00000459788 TEX28O15482 410 aa10.99□□□□□ -0.65
HDLBP-228ENST00000459788 TRAPPC3O43617 180 aa10.99□□□□□ -0.65
HDLBP-228ENST00000459788 TADA2AO75478 443 aa10.99□□□□□ -0.65
HDLBP-228ENST00000459788 PLS3P13797 630 aa10.99□□□□□ -0.65
HDLBP-228ENST00000459788 PLA2G5P39877 138 aa10.99□□□□□ -0.65
HDLBP-228ENST00000459788 UBA7P41226 1012 aa10.99□□□□□ -0.65
HDLBP-228ENST00000459788 NUBP1P53384 320 aa10.99□□□□□ -0.65
HDLBP-228ENST00000459788 YARSP54577 528 aaKnown RBP10.99□□□□□ -0.65
HDLBP-228ENST00000459788 SLC12A3P55017 1021 aa10.99□□□□□ -0.65
HDLBP-228ENST00000459788 PEX3P56589 373 aa10.99□□□□□ -0.65
HDLBP-228ENST00000459788 STRN3Q13033 797 aa10.99□□□□□ -0.65
HDLBP-228ENST00000459788 NT5DC1Q5TFE4 455 aa10.99□□□□□ -0.65
HDLBP-228ENST00000459788 DCLRE1AQ6PJP8 1040 aa10.99□□□□□ -0.65
HDLBP-228ENST00000459788 ALKAL1Q6UXT8 129 aa10.99□□□□□ -0.65
HDLBP-228ENST00000459788 TRIM67Q6ZTA4 783 aa10.99□□□□□ -0.65
HDLBP-228ENST00000459788 OTOP3Q7RTS5 596 aa10.99□□□□□ -0.65
HDLBP-228ENST00000459788 AUTS2Q8WXX7 1259 aa10.99□□□□□ -0.65
HDLBP-228ENST00000459788 PIK3R5Q8WYR1 880 aa10.99□□□□□ -0.65
HDLBP-228ENST00000459788 ACSF2Q96CM8 615 aaPredicted RBP10.99□□□□□ -0.65
HDLBP-228ENST00000459788 DDX27Q96GQ7 796 aaKnown RBP10.99□□□□□ -0.65
HDLBP-228ENST00000459788 RPGRIP1Q96KN7 1286 aa10.99□□□□□ -0.65
HDLBP-228ENST00000459788 PNMA5Q96PV4 448 aa10.99□□□□□ -0.65
HDLBP-228ENST00000459788 PPP1R10Q96QC0 940 aaKnown RBP10.99□□□□□ -0.65
HDLBP-228ENST00000459788 RUSC1Q9BVN2 902 aa10.99□□□□□ -0.65
HDLBP-228ENST00000459788 ZDHHC7Q9NXF8 308 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms