RNA–Protein interactions for RNA: ENST00000459584.1

SNORD42A-201, Transcript of small nucleolar RNA, C/D box 42A, humanhuman

BASIC

Gene SNORD42A, Length 64 nt, Biotype snoRNA, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD42A-201ENST00000459584 PCDH12Q9NPG4 1184 aa4.96□□□□□ -1.62
SNORD42A-201ENST00000459584 MKS1Q9NXB0 559 aa4.96□□□□□ -1.62
SNORD42A-201ENST00000459584 EIF2B4Q9UI10 523 aaKnown RBP4.96□□□□□ -1.62
SNORD42A-201ENST00000459584 ING1Q9UK53 422 aaPredicted RBP4.96□□□□□ -1.62
SNORD42A-201ENST00000459584 COL4A3BPQ9Y5P4 624 aa4.96□□□□□ -1.62
SNORD42A-201ENST00000459584 PCDHGA12O60330 932 aa4.95□□□□□ -1.62
SNORD42A-201ENST00000459584 NR4A1P22736 598 aa4.95□□□□□ -1.62
SNORD42A-201ENST00000459584 SREBF1P36956 1147 aa4.95□□□□□ -1.62
SNORD42A-201ENST00000459584 PCBP2Q15366 365 aaKnown RBP eCLIP4.95□□□□□ -1.62
SNORD42A-201ENST00000459584 BMT2Q1RMZ1 405 aa4.95□□□□□ -1.62
SNORD42A-201ENST00000459584 FAM47AQ5JRC9 791 aa4.95□□□□□ -1.62
SNORD42A-201ENST00000459584 FAM180AQ6UWF9 173 aa4.95□□□□□ -1.62
SNORD42A-201ENST00000459584 NRG4Q8WWG1 115 aa4.95□□□□□ -1.62
SNORD42A-201ENST00000459584 JADE3Q92613 823 aa4.95□□□□□ -1.62
SNORD42A-201ENST00000459584 CLIP3Q96DZ5 547 aa4.95□□□□□ -1.62
SNORD42A-201ENST00000459584 PHACTR3Q96KR7 559 aa4.95□□□□□ -1.62
SNORD42A-201ENST00000459584 ZNF277Q9NRM2 450 aaPredicted RBP4.95□□□□□ -1.62
SNORD42A-201ENST00000459584 GPRC5BQ9NZH0 403 aa4.95□□□□□ -1.62
SNORD42A-201ENST00000459584 POGKQ9P215 609 aa4.95□□□□□ -1.62
SNORD42A-201ENST00000459584 INTUQ9ULD6 942 aa4.95□□□□□ -1.62
SNORD42A-201ENST00000459584 SIK3Q9Y2K2 1263 aa4.95□□□□□ -1.62
SNORD42A-201ENST00000459584 PCDHGA9Q9Y5G4 932 aaKnown RBP4.95□□□□□ -1.62
SNORD42A-201ENST00000459584 PCDHGA8Q9Y5G5 932 aa4.95□□□□□ -1.62
SNORD42A-201ENST00000459584 PCDHGA7Q9Y5G6 932 aa4.95□□□□□ -1.62
SNORD42A-201ENST00000459584 PCDHGA6Q9Y5G7 932 aa4.95□□□□□ -1.62
SNORD42A-201ENST00000459584 PCDHGA3Q9Y5H0 932 aa4.95□□□□□ -1.62
SNORD42A-201ENST00000459584 WASHC2CQ9Y4E1 1318 aa4.95□□□□□ -1.62
SNORD42A-201ENST00000459584 POLR2AP24928 1970 aaKnown RBP4.95□□□□□ -1.62
SNORD42A-201ENST00000459584 TRIM75PA6NK02 468 aa4.94□□□□□ -1.62
SNORD42A-201ENST00000459584 CXorf49A8MYA2 514 aaPredicted RBP4.94□□□□□ -1.62
SNORD42A-201ENST00000459584 GABRDO14764 452 aa4.94□□□□□ -1.62
SNORD42A-201ENST00000459584 SLPIP03973 132 aa4.94□□□□□ -1.62
SNORD42A-201ENST00000459584 FPR1P21462 350 aa4.94□□□□□ -1.62
SNORD42A-201ENST00000459584 SLC6A9P48067 706 aa4.94□□□□□ -1.62
SNORD42A-201ENST00000459584 FLT3LGP49771 235 aa4.94□□□□□ -1.62
SNORD42A-201ENST00000459584 RAP2BP61225 183 aa4.94□□□□□ -1.62
SNORD42A-201ENST00000459584 NHLH2Q02577 135 aa4.94□□□□□ -1.62
SNORD42A-201ENST00000459584 METTL24Q5JXM2 366 aa4.94□□□□□ -1.62
SNORD42A-201ENST00000459584 EFCAB12Q6NXP0 572 aa4.94□□□□□ -1.62
SNORD42A-201ENST00000459584 ZNF572Q7Z3I7 529 aaPredicted RBP4.94□□□□□ -1.62
SNORD42A-201ENST00000459584 ZNF276Q8N554 614 aa4.94□□□□□ -1.62
SNORD42A-201ENST00000459584 OR10H5Q8NGA6 315 aa4.94□□□□□ -1.62
SNORD42A-201ENST00000459584 CCHCR1Q8TD31 782 aa4.94□□□□□ -1.62
SNORD42A-201ENST00000459584 ZNF483Q8TF39 744 aaPredicted RBP4.94□□□□□ -1.62
SNORD42A-201ENST00000459584 SLC25A43Q8WUT9 341 aaPredicted RBP4.94□□□□□ -1.62
SNORD42A-201ENST00000459584 TFAP2CQ92754 450 aa4.94□□□□□ -1.62
SNORD42A-201ENST00000459584 FAM193BQ96PV7 902 aaPredicted RBP4.94□□□□□ -1.62
SNORD42A-201ENST00000459584 TEX101Q9BY14 249 aa4.94□□□□□ -1.62
SNORD42A-201ENST00000459584 SENP6Q9GZR1 1112 aaPredicted RBP4.94□□□□□ -1.62
SNORD42A-201ENST00000459584 NRDE2Q9H7Z3 1164 aa4.94□□□□□ -1.62
SNORD42A-201ENST00000459584 SRRDQ9UH36 339 aa4.94□□□□□ -1.62
SNORD42A-201ENST00000459584 TUBD1Q9UJT1 453 aa4.94□□□□□ -1.62
SNORD42A-201ENST00000459584 AJAP1Q9UKB5 411 aaPredicted RBP4.94□□□□□ -1.62
SNORD42A-201ENST00000459584 PNPLA7Q6ZV29 1317 aa4.94□□□□□ -1.62
SNORD42A-201ENST00000459584 ATRNL1Q5VV63 1379 aa4.93□□□□□ -1.62
SNORD42A-201ENST00000459584 AHRRA9YTQ3 701 aa4.93□□□□□ -1.62
SNORD42A-201ENST00000459584 B5MCH6 92 aa4.93□□□□□ -1.62
SNORD42A-201ENST00000459584 XPOTO43592 962 aaKnown RBP4.93□□□□□ -1.62
SNORD42A-201ENST00000459584 NDUFS2O75306 463 aa4.93□□□□□ -1.62
SNORD42A-201ENST00000459584 RAP2AP10114 183 aa4.93□□□□□ -1.62
SNORD42A-201ENST00000459584 ALOX15P16050 662 aaPredicted RBP4.93□□□□□ -1.62
SNORD42A-201ENST00000459584 C5AR1P21730 350 aa4.93□□□□□ -1.62
SNORD42A-201ENST00000459584 RNASE9P60153 205 aaKnown RBP4.93□□□□□ -1.62
SNORD42A-201ENST00000459584 FAM189BP81408 668 aa4.93□□□□□ -1.62
SNORD42A-201ENST00000459584 ABHD18Q0P651 414 aa4.93□□□□□ -1.62
SNORD42A-201ENST00000459584 AFMIDQ63HM1 303 aa4.93□□□□□ -1.62
SNORD42A-201ENST00000459584 USP51Q70EK9 711 aa4.93□□□□□ -1.62
SNORD42A-201ENST00000459584 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.93□□□□□ -1.62
SNORD42A-201ENST00000459584 NEU4Q8WWR8 484 aaPredicted RBP4.93□□□□□ -1.62
SNORD42A-201ENST00000459584 RAB24Q969Q5 203 aa4.93□□□□□ -1.62
SNORD42A-201ENST00000459584 FUBP3Q96I24 572 aaKnown RBP eCLIP4.93□□□□□ -1.62
SNORD42A-201ENST00000459584 GPATCH3Q96I76 525 aa4.93□□□□□ -1.62
SNORD42A-201ENST00000459584 SMAD5Q99717 465 aaKnown RBP4.93□□□□□ -1.62
SNORD42A-201ENST00000459584 MYOCQ99972 504 aa4.93□□□□□ -1.62
SNORD42A-201ENST00000459584 TRPM5Q9NZQ8 1165 aa4.93□□□□□ -1.62
SNORD42A-201ENST00000459584 ACTL7AQ9Y615 435 aa4.93□□□□□ -1.62
SNORD42A-201ENST00000459584 TNKSO95271 1327 aa4.93□□□□□ -1.62
SNORD42A-201ENST00000459584 KLHL33A6NCF5 533 aa4.92□□□□□ -1.62
SNORD42A-201ENST00000459584 FZD9O00144 591 aa4.92□□□□□ -1.62
SNORD42A-201ENST00000459584 ZNF185O15231 689 aa4.92□□□□□ -1.62
SNORD42A-201ENST00000459584 RECQL4O94761 1208 aa4.92□□□□□ -1.62
SNORD42A-201ENST00000459584 RBP3P10745 1247 aa4.92□□□□□ -1.62
SNORD42A-201ENST00000459584 ZFP36P26651 326 aaKnown RBP4.92□□□□□ -1.62
SNORD42A-201ENST00000459584 PCSK1P29120 753 aa4.92□□□□□ -1.62
SNORD42A-201ENST00000459584 MCM7P33993 719 aa4.92□□□□□ -1.62
SNORD42A-201ENST00000459584 ALDH1A3P47895 512 aa4.92□□□□□ -1.62
SNORD42A-201ENST00000459584 CHN2P52757 468 aa4.92□□□□□ -1.62
SNORD42A-201ENST00000459584 CLRN1P58418 232 aa4.92□□□□□ -1.62
SNORD42A-201ENST00000459584 MGAT2Q10469 447 aa4.92□□□□□ -1.62
SNORD42A-201ENST00000459584 SP140Q13342 867 aa4.92□□□□□ -1.62
SNORD42A-201ENST00000459584 FHL2Q14192 279 aa4.92□□□□□ -1.62
SNORD42A-201ENST00000459584 PTPROQ16827 1216 aa4.92□□□□□ -1.62
SNORD42A-201ENST00000459584 ATXN7L2Q5T6C5 722 aaPredicted RBP4.92□□□□□ -1.62
SNORD42A-201ENST00000459584 RHOT1Q8IXI2 618 aa4.92□□□□□ -1.62
SNORD42A-201ENST00000459584 ZGPATQ8N5A5 531 aaKnown RBP4.92□□□□□ -1.62
SNORD42A-201ENST00000459584 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.92□□□□□ -1.62
SNORD42A-201ENST00000459584 LARP4BQ92615 738 aaKnown RBP4.92□□□□□ -1.62
SNORD42A-201ENST00000459584 SORCS2Q96PQ0 1159 aa4.92□□□□□ -1.62
SNORD42A-201ENST00000459584 MRI1Q9BV20 369 aa4.92□□□□□ -1.62
SNORD42A-201ENST00000459584 KRTAP4-5Q9BYR2 181 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms