RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 ZNF229Q9UJW7 825 aa20.78■□□□□ 0.92
SNX27-204ENST00000458013 CTSHP09668 335 aa20.78■□□□□ 0.92
SNX27-204ENST00000458013 LRRC74AQ0VAA2 488 aa20.78■□□□□ 0.92
SNX27-204ENST00000458013 QRICH1Q2TAL8 776 aa20.78■□□□□ 0.92
SNX27-204ENST00000458013 C4orf33Q8N1A6 199 aa20.78■□□□□ 0.92
SNX27-204ENST00000458013 CYGBQ8WWM9 190 aa20.78■□□□□ 0.92
SNX27-204ENST00000458013 ASMTLO95671 621 aa20.78■□□□□ 0.92
SNX27-204ENST00000458013 PDGFRBP09619 1106 aa20.78■□□□□ 0.92
SNX27-204ENST00000458013 ATP6V1G3Q96LB4 118 aa20.78■□□□□ 0.92
SNX27-204ENST00000458013 SKIV2LQ15477 1246 aaKnown RBP20.77■□□□□ 0.92
SNX27-204ENST00000458013 CCDC33Q8N5R6 958 aa20.77■□□□□ 0.92
SNX27-204ENST00000458013 BTN2A2Q8WVV5 523 aa20.77■□□□□ 0.92
SNX27-204ENST00000458013 RPAP3Q9H6T3 665 aaPredicted RBP20.77■□□□□ 0.92
SNX27-204ENST00000458013 MAD2L2Q9UI95 211 aa20.77■□□□□ 0.92
SNX27-204ENST00000458013 ERVK-7P63135 1459 aa20.77■□□□□ 0.92
SNX27-204ENST00000458013 RCSD1Q6JBY9 416 aa20.77■□□□□ 0.92
SNX27-204ENST00000458013 SEPT12Q8IYM1 358 aa20.77■□□□□ 0.92
SNX27-204ENST00000458013 ADCY3O60266 1144 aa20.77■□□□□ 0.92
SNX27-204ENST00000458013 GRM4Q14833 912 aa20.77■□□□□ 0.92
SNX27-204ENST00000458013 FBXW10Q5XX13 1052 aa20.77■□□□□ 0.92
SNX27-204ENST00000458013 SPDYE5A6NIY4 337 aa20.77■□□□□ 0.92
SNX27-204ENST00000458013 TMCC1O94876 653 aa20.77■□□□□ 0.92
SNX27-204ENST00000458013 UPP2O95045 317 aa20.77■□□□□ 0.92
SNX27-204ENST00000458013 SPDYE7PQ495Y7 208 aa20.77■□□□□ 0.92
SNX27-204ENST00000458013 BTBD8Q5XKL5 378 aa20.77■□□□□ 0.92
SNX27-204ENST00000458013 GALNT4Q8N4A0 578 aa20.77■□□□□ 0.92
SNX27-204ENST00000458013 ZBTB22O15209 634 aa20.77■□□□□ 0.91
SNX27-204ENST00000458013 FOXP4Q8IVH2 680 aaPredicted RBP20.77■□□□□ 0.91
SNX27-204ENST00000458013 AGPAT1Q99943 283 aa20.77■□□□□ 0.91
SNX27-204ENST00000458013 MRPL4Q9BYD3 311 aaKnown RBP20.77■□□□□ 0.91
SNX27-204ENST00000458013 DCP1AQ9NPI6 582 aaPredicted RBP20.77■□□□□ 0.91
SNX27-204ENST00000458013 C11orf96Q7Z7L8 435 aa20.76■□□□□ 0.91
SNX27-204ENST00000458013 CAPN10Q9HC96 672 aa20.76■□□□□ 0.91
SNX27-204ENST00000458013 CHN1P15882 459 aa20.76■□□□□ 0.91
SNX27-204ENST00000458013 TFDP2Q14188 446 aa20.76■□□□□ 0.91
SNX27-204ENST00000458013 SLC35G2Q8TBE7 412 aa20.76■□□□□ 0.91
SNX27-204ENST00000458013 KLF6Q99612 283 aaPredicted RBP20.76■□□□□ 0.91
SNX27-204ENST00000458013 TOPORSQ9NS56 1045 aaPredicted RBP20.76■□□□□ 0.91
SNX27-204ENST00000458013 AGO2Q9UKV8 859 aaKnown RBP20.76■□□□□ 0.91
SNX27-204ENST00000458013 QARSP47897 775 aaKnown RBP20.76■□□□□ 0.91
SNX27-204ENST00000458013 SHCBP1LQ9BZQ2 653 aa20.76■□□□□ 0.91
SNX27-204ENST00000458013 PCMTD2Q9NV79 361 aa20.76■□□□□ 0.91
SNX27-204ENST00000458013 KRT39Q6A163 491 aa20.76■□□□□ 0.91
SNX27-204ENST00000458013 TTC13Q8NBP0 860 aa20.76■□□□□ 0.91
SNX27-204ENST00000458013 DDX28Q9NUL7 540 aaKnown RBP20.76■□□□□ 0.91
SNX27-204ENST00000458013 ARHGEF37A1IGU5 675 aa20.76■□□□□ 0.91
SNX27-204ENST00000458013 PHF20L1A8MW92 1017 aa20.76■□□□□ 0.91
SNX27-204ENST00000458013 YWHABP31946 246 aaKnown RBP20.76■□□□□ 0.91
SNX27-204ENST00000458013 IFNA8P32881 189 aa20.76■□□□□ 0.91
SNX27-204ENST00000458013 CSE1LP55060 971 aaKnown RBP20.76■□□□□ 0.91
SNX27-204ENST00000458013 PDXDC1Q6P996 788 aa20.76■□□□□ 0.91
SNX27-204ENST00000458013 ADCK2Q7Z695 626 aa20.76■□□□□ 0.91
SNX27-204ENST00000458013 MCEEQ96PE7 176 aa20.76■□□□□ 0.91
SNX27-204ENST00000458013 CHP1Q99653 195 aa20.76■□□□□ 0.91
SNX27-204ENST00000458013 TMEM117Q9H0C3 514 aa20.76■□□□□ 0.91
SNX27-204ENST00000458013 SENP1Q9P0U3 644 aa20.76■□□□□ 0.91
SNX27-204ENST00000458013 UTYO14607 1347 aa20.75■□□□□ 0.91
SNX27-204ENST00000458013 KDM6BO15054 1643 aa20.75■□□□□ 0.91
SNX27-204ENST00000458013 PARVAQ9NVD7 372 aa20.75■□□□□ 0.91
SNX27-204ENST00000458013 ROBO2Q9HCK4 1378 aa20.75■□□□□ 0.91
SNX27-204ENST00000458013 ERVV-1B6SEH8 477 aa20.75■□□□□ 0.91
SNX27-204ENST00000458013 TLR2O60603 784 aa20.75■□□□□ 0.91
SNX27-204ENST00000458013 IGKV5-2P06315 115 aa20.75■□□□□ 0.91
SNX27-204ENST00000458013 ETFBP38117 255 aa20.75■□□□□ 0.91
SNX27-204ENST00000458013 ZNF235Q14590 738 aa20.75■□□□□ 0.91
SNX27-204ENST00000458013 SMTNL2Q2TAL5 461 aa20.75■□□□□ 0.91
SNX27-204ENST00000458013 AARS2Q5JTZ9 985 aaKnown RBP20.75■□□□□ 0.91
SNX27-204ENST00000458013 GCOM2Q9BZD3 368 aaPredicted RBP20.75■□□□□ 0.91
SNX27-204ENST00000458013 PLEKHA5Q9HAU0 1116 aa20.75■□□□□ 0.91
SNX27-204ENST00000458013 ADGRG1Q9Y653 693 aa20.75■□□□□ 0.91
SNX27-204ENST00000458013 ENO3P13929 434 aaPredicted RBP20.75■□□□□ 0.91
SNX27-204ENST00000458013 PGM1P36871 562 aa20.75■□□□□ 0.91
SNX27-204ENST00000458013 SGO1Q5FBB7 561 aa20.75■□□□□ 0.91
SNX27-204ENST00000458013 MB21D2Q8IYB1 491 aaPredicted RBP20.75■□□□□ 0.91
SNX27-204ENST00000458013 WNT8AQ9H1J5 351 aa20.75■□□□□ 0.91
SNX27-204ENST00000458013 PALMDQ9NP74 551 aa20.75■□□□□ 0.91
SNX27-204ENST00000458013 BARHL2Q9NY43 387 aa20.75■□□□□ 0.91
SNX27-204ENST00000458013 PIN4Q9Y237 131 aaKnown RBP20.75■□□□□ 0.91
SNX27-204ENST00000458013 KDM5CP41229 1560 aa20.75■□□□□ 0.91
SNX27-204ENST00000458013 GFAPP14136 432 aa20.75■□□□□ 0.91
SNX27-204ENST00000458013 FAM117BQ6P1L5 589 aa20.75■□□□□ 0.91
SNX27-204ENST00000458013 MMS22LQ6ZRQ5 1243 aa20.75■□□□□ 0.91
SNX27-204ENST00000458013 RNF149Q8NC42 400 aa20.75■□□□□ 0.91
SNX27-204ENST00000458013 XPO7Q9UIA9 1087 aaKnown RBP20.75■□□□□ 0.91
SNX27-204ENST00000458013 MIF4GDA9UHW6 222 aaKnown RBP20.75■□□□□ 0.91
SNX27-204ENST00000458013 H7C1W4 665 aa20.75■□□□□ 0.91
SNX27-204ENST00000458013 ARIH2O95376 493 aa20.75■□□□□ 0.91
SNX27-204ENST00000458013 ASNSP08243 561 aa20.75■□□□□ 0.91
SNX27-204ENST00000458013 VSNL1P62760 191 aa20.75■□□□□ 0.91
SNX27-204ENST00000458013 ATP11CQ8NB49 1132 aa20.75■□□□□ 0.91
SNX27-204ENST00000458013 CD209Q9NNX6 404 aa20.75■□□□□ 0.91
SNX27-204ENST00000458013 RHOT1Q8IXI2 618 aa20.74■□□□□ 0.91
SNX27-204ENST00000458013 RTKN2Q8IZC4 609 aa20.74■□□□□ 0.91
SNX27-204ENST00000458013 C2orf69Q8N8R5 385 aa20.74■□□□□ 0.91
SNX27-204ENST00000458013 IL17RAQ96F46 866 aa20.74■□□□□ 0.91
SNX27-204ENST00000458013 ASPSCR1Q9BZE9 553 aa20.74■□□□□ 0.91
SNX27-204ENST00000458013 CDV3Q9UKY7 258 aaKnown RBP20.74■□□□□ 0.91
SNX27-204ENST00000458013 AKR1B1P15121 316 aa20.74■□□□□ 0.91
SNX27-204ENST00000458013 RNPC3Q96LT9 517 aaKnown RBP20.74■□□□□ 0.91
SNX27-204ENST00000458013 PNMA3Q9UL41 463 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms