RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 DGLUCYQ7Z3D6 616 aa17.4■□□□□ 0.38
CHCHD3-204ENST00000457942 RSAD2Q8WXG1 361 aa17.4■□□□□ 0.38
CHCHD3-204ENST00000457942 ACSF2Q96CM8 615 aaPredicted RBP17.4■□□□□ 0.38
CHCHD3-204ENST00000457942 PRIMPOLQ96LW4 560 aa17.4■□□□□ 0.38
CHCHD3-204ENST00000457942 KLHL5Q96PQ7 755 aa17.4■□□□□ 0.38
CHCHD3-204ENST00000457942 KIF2CQ99661 725 aa17.4■□□□□ 0.38
CHCHD3-204ENST00000457942 SFXN1Q9H9B4 322 aa17.4■□□□□ 0.38
CHCHD3-204ENST00000457942 MARCH5Q9NX47 278 aa17.4■□□□□ 0.38
CHCHD3-204ENST00000457942 LRWD1Q9UFC0 647 aa17.4■□□□□ 0.38
CHCHD3-204ENST00000457942 CA14Q9ULX7 337 aa17.4■□□□□ 0.38
CHCHD3-204ENST00000457942 DUSP12Q9UNI6 340 aa17.4■□□□□ 0.38
CHCHD3-204ENST00000457942 SSX2IPQ9Y2D8 614 aa17.4■□□□□ 0.38
CHCHD3-204ENST00000457942 C2orf16Q68DN1 1984 aa17.39■□□□□ 0.37
CHCHD3-204ENST00000457942 N4BP3O15049 544 aa17.39■□□□□ 0.37
CHCHD3-204ENST00000457942 PRKCBP05771 671 aa17.39■□□□□ 0.37
CHCHD3-204ENST00000457942 CNPP09543 421 aaKnown RBP17.39■□□□□ 0.37
CHCHD3-204ENST00000457942 GLUD2P49448 558 aa17.39■□□□□ 0.37
CHCHD3-204ENST00000457942 GRIK3Q13003 919 aa17.39■□□□□ 0.37
CHCHD3-204ENST00000457942 PRPF4BQ13523 1007 aaKnown RBP17.39■□□□□ 0.37
CHCHD3-204ENST00000457942 PPP2R5AQ15172 486 aa17.39■□□□□ 0.37
CHCHD3-204ENST00000457942 RABEP1Q15276 862 aa17.39■□□□□ 0.37
CHCHD3-204ENST00000457942 MAPK6Q16659 721 aa17.39■□□□□ 0.37
CHCHD3-204ENST00000457942 CDCA2Q69YH5 1023 aaPredicted RBP17.39■□□□□ 0.37
CHCHD3-204ENST00000457942 MCTP1Q6DN14 999 aa17.39■□□□□ 0.37
CHCHD3-204ENST00000457942 PPP4R3CPQ6ZMV5 832 aa17.39■□□□□ 0.37
CHCHD3-204ENST00000457942 SNX29Q8TEQ0 813 aa17.39■□□□□ 0.37
CHCHD3-204ENST00000457942 SLC22A17Q8WUG5 538 aa17.39■□□□□ 0.37
CHCHD3-204ENST00000457942 IFT74Q96LB3 600 aa17.39■□□□□ 0.37
CHCHD3-204ENST00000457942 ADPGKQ9BRR6 497 aa17.39■□□□□ 0.37
CHCHD3-204ENST00000457942 COLEC11Q9BWP8 271 aa17.39■□□□□ 0.37
CHCHD3-204ENST00000457942 UPF2Q9HAU5 1272 aaKnown RBP17.39■□□□□ 0.37
CHCHD3-204ENST00000457942 KCNK12Q9HB15 430 aa17.39■□□□□ 0.37
CHCHD3-204ENST00000457942 MIOSQ9NXC5 875 aa17.39■□□□□ 0.37
CHCHD3-204ENST00000457942 USTQ9Y2C2 406 aa17.39■□□□□ 0.37
CHCHD3-204ENST00000457942 A0A1B0GUA9 196 aa17.38■□□□□ 0.37
CHCHD3-204ENST00000457942 INPPL1O15357 1258 aa17.38■□□□□ 0.37
CHCHD3-204ENST00000457942 ADH1AP07327 375 aa17.38■□□□□ 0.37
CHCHD3-204ENST00000457942 CYP11B2P19099 503 aa17.38■□□□□ 0.37
CHCHD3-204ENST00000457942 NAMPTP43490 491 aa17.38■□□□□ 0.37
CHCHD3-204ENST00000457942 FXR2P51116 673 aaKnown RBP eCLIP17.38■□□□□ 0.37
CHCHD3-204ENST00000457942 CLCN4P51793 760 aa17.38■□□□□ 0.37
CHCHD3-204ENST00000457942 DSC1Q08554 894 aa17.38■□□□□ 0.37
CHCHD3-204ENST00000457942 ELMSAN1Q6PJG2 1045 aa17.38■□□□□ 0.37
CHCHD3-204ENST00000457942 OTOP3Q7RTS5 596 aa17.38■□□□□ 0.37
CHCHD3-204ENST00000457942 ST13P5Q8NFI4 369 aaPredicted RBP17.38■□□□□ 0.37
CHCHD3-204ENST00000457942 BSNDQ8WZ55 320 aa17.38■□□□□ 0.37
CHCHD3-204ENST00000457942 BHMT2Q9H2M3 363 aa17.38■□□□□ 0.37
CHCHD3-204ENST00000457942 DDX19AQ9NUU7 478 aaKnown RBP17.38■□□□□ 0.37
CHCHD3-204ENST00000457942 KIAA1024Q9UPX6 916 aa17.38■□□□□ 0.37
CHCHD3-204ENST00000457942 GTF3C3Q9Y5Q9 886 aa17.38■□□□□ 0.37
CHCHD3-204ENST00000457942 F8W810 466 aa17.37■□□□□ 0.37
CHCHD3-204ENST00000457942 LMNAP02545 664 aaKnown RBP17.37■□□□□ 0.37
CHCHD3-204ENST00000457942 MUTP22033 750 aa17.37■□□□□ 0.37
CHCHD3-204ENST00000457942 PTGDRQ13258 359 aa17.37■□□□□ 0.37
CHCHD3-204ENST00000457942 TAS1R1Q7RTX1 841 aa17.37■□□□□ 0.37
CHCHD3-204ENST00000457942 GPR149Q86SP6 731 aa17.37■□□□□ 0.37
CHCHD3-204ENST00000457942 RTP3Q9BQQ7 232 aa17.37■□□□□ 0.37
CHCHD3-204ENST00000457942 KIFC3Q9BVG8 833 aa17.37■□□□□ 0.37
CHCHD3-204ENST00000457942 PDZD7Q9H5P4 517 aa17.37■□□□□ 0.37
CHCHD3-204ENST00000457942 MAN1C1Q9NR34 630 aa17.37■□□□□ 0.37
CHCHD3-204ENST00000457942 PCDHB6Q9Y5E3 794 aa17.37■□□□□ 0.37
CHCHD3-204ENST00000457942 STK24Q9Y6E0 443 aa17.37■□□□□ 0.37
CHCHD3-204ENST00000457942 ZMYM2Q9UBW7 1377 aa17.37■□□□□ 0.37
CHCHD3-204ENST00000457942 NCOR2Q9Y618 2525 aa17.37■□□□□ 0.37
CHCHD3-204ENST00000457942 KRBA1A5PL33 1030 aa17.36■□□□□ 0.37
CHCHD3-204ENST00000457942 N4BP1O75113 896 aaKnown RBP17.36■□□□□ 0.37
CHCHD3-204ENST00000457942 TADA2AO75478 443 aa17.36■□□□□ 0.37
CHCHD3-204ENST00000457942 GLUD1P00367 558 aa17.36■□□□□ 0.37
CHCHD3-204ENST00000457942 U2AF2P26368 475 aaKnown RBP eCLIP17.36■□□□□ 0.377e-7■■■□□ 15.8
CHCHD3-204ENST00000457942 GBP2P32456 591 aaPredicted RBP17.36■□□□□ 0.37
CHCHD3-204ENST00000457942 ZRSR1Q15695 479 aaKnown RBP17.36■□□□□ 0.37
CHCHD3-204ENST00000457942 ECM1Q16610 540 aa17.36■□□□□ 0.37
CHCHD3-204ENST00000457942 FAM187BQ17R55 369 aa17.36■□□□□ 0.37
CHCHD3-204ENST00000457942 KRT79Q5XKE5 535 aa17.36■□□□□ 0.37
CHCHD3-204ENST00000457942 FUT10Q6P4F1 479 aa17.36■□□□□ 0.37
CHCHD3-204ENST00000457942 RABGGTAQ92696 567 aa17.36■□□□□ 0.37
CHCHD3-204ENST00000457942 KIFAP3Q92845 792 aa17.36■□□□□ 0.37
CHCHD3-204ENST00000457942 FZD8Q9H461 694 aa17.36■□□□□ 0.37
CHCHD3-204ENST00000457942 POLD4Q9HCU8 107 aa17.36■□□□□ 0.37
CHCHD3-204ENST00000457942 SNTG2Q9NY99 539 aa17.36■□□□□ 0.37
CHCHD3-204ENST00000457942 ADAM28Q9UKQ2 775 aa17.36■□□□□ 0.37
CHCHD3-204ENST00000457942 USP20Q9Y2K6 914 aa17.36■□□□□ 0.37
CHCHD3-204ENST00000457942 EP300Q09472 2414 aaPredicted RBP17.36■□□□□ 0.37
CHCHD3-204ENST00000457942 CASTOR2A6NHX0 329 aa17.35■□□□□ 0.37
CHCHD3-204ENST00000457942 TTLL13PA6NNM8 815 aa17.35■□□□□ 0.37
CHCHD3-204ENST00000457942 H3BQV1 296 aa17.35■□□□□ 0.37
CHCHD3-204ENST00000457942 ACKR2O00590 384 aa17.35■□□□□ 0.37
CHCHD3-204ENST00000457942 TEX28O15482 410 aa17.35■□□□□ 0.37
CHCHD3-204ENST00000457942 RECQL4O94761 1208 aa17.35■□□□□ 0.37
CHCHD3-204ENST00000457942 DCNP07585 359 aaKnown RBP17.35■□□□□ 0.37
CHCHD3-204ENST00000457942 USP41Q3LFD5 358 aa17.35■□□□□ 0.37
CHCHD3-204ENST00000457942 DTHD1Q6ZMT9 781 aa17.35■□□□□ 0.37
CHCHD3-204ENST00000457942 GLYCTKQ8IVS8 523 aa17.35■□□□□ 0.37
CHCHD3-204ENST00000457942 DCLK2Q8N568 766 aa17.35■□□□□ 0.37
CHCHD3-204ENST00000457942 C4orf32Q8N8J7 132 aa17.35■□□□□ 0.37
CHCHD3-204ENST00000457942 B3GALT6Q96L58 329 aa17.35■□□□□ 0.37
CHCHD3-204ENST00000457942 TBC1D17Q9HA65 648 aa17.35■□□□□ 0.37
CHCHD3-204ENST00000457942 DPP7Q9UHL4 492 aa17.35■□□□□ 0.37
CHCHD3-204ENST00000457942 GDAQ9Y2T3 454 aa17.35■□□□□ 0.37
CHCHD3-204ENST00000457942 CCDC169A6NNP5 214 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms