RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 ZDHHC24Q6UX98 284 aa3.56□□□□□ -1.84
HMGN1P18-201ENST00000457642 TRIM72Q6ZMU5 477 aa3.56□□□□□ -1.84
HMGN1P18-201ENST00000457642 DHX30Q7L2E3 1194 aaKnown RBP eCLIP3.56□□□□□ -1.84
HMGN1P18-201ENST00000457642 OTUD6AQ7L8S5 288 aa3.56□□□□□ -1.84
HMGN1P18-201ENST00000457642 GSTA5Q7RTV2 222 aa3.56□□□□□ -1.84
HMGN1P18-201ENST00000457642 SPATA21Q7Z572 469 aa3.56□□□□□ -1.84
HMGN1P18-201ENST00000457642 PIGWQ7Z7B1 504 aa3.56□□□□□ -1.84
HMGN1P18-201ENST00000457642 PNMA8AQ86V59 439 aaPredicted RBP3.56□□□□□ -1.84
HMGN1P18-201ENST00000457642 KIAA0825Q8IV33 1275 aa3.56□□□□□ -1.84
HMGN1P18-201ENST00000457642 FAM71AQ8IYT1 594 aa3.56□□□□□ -1.84
HMGN1P18-201ENST00000457642 NLGN1Q8N2Q7 840 aa3.56□□□□□ -1.84
HMGN1P18-201ENST00000457642 CERS5Q8N5B7 392 aa3.56□□□□□ -1.84
HMGN1P18-201ENST00000457642 PRELID2Q8N945 189 aa3.56□□□□□ -1.84
HMGN1P18-201ENST00000457642 CCDC89Q8N998 374 aa3.56□□□□□ -1.84
HMGN1P18-201ENST00000457642 ANKRD42Q8N9B4 389 aa3.56□□□□□ -1.84
HMGN1P18-201ENST00000457642 RDH13Q8NBN7 331 aa3.56□□□□□ -1.84
HMGN1P18-201ENST00000457642 BANK1Q8NDB2 785 aa3.56□□□□□ -1.84
HMGN1P18-201ENST00000457642 FBXL13Q8NEE6 735 aa3.56□□□□□ -1.84
HMGN1P18-201ENST00000457642 FLAD1Q8NFF5 587 aa3.56□□□□□ -1.84
HMGN1P18-201ENST00000457642 RDM1Q8NG50 284 aa3.56□□□□□ -1.84
HMGN1P18-201ENST00000457642 ATL2Q8NHH9 583 aa3.56□□□□□ -1.84
HMGN1P18-201ENST00000457642 MDM1Q8TC05 714 aa3.56□□□□□ -1.84
HMGN1P18-201ENST00000457642 TMC2Q8TDI7 906 aa3.56□□□□□ -1.84
HMGN1P18-201ENST00000457642 EPS8L3Q8TE67 593 aaKnown RBP3.56□□□□□ -1.84
HMGN1P18-201ENST00000457642 SLC20A1Q8WUM9 679 aa3.56□□□□□ -1.84
HMGN1P18-201ENST00000457642 ALG3Q92685 438 aa3.56□□□□□ -1.84
HMGN1P18-201ENST00000457642 N4BP2L2Q92802 583 aaPredicted RBP3.56□□□□□ -1.84
HMGN1P18-201ENST00000457642 GLG1Q92896 1179 aa3.56□□□□□ -1.84
HMGN1P18-201ENST00000457642 SLCO2A1Q92959 643 aa3.56□□□□□ -1.84
HMGN1P18-201ENST00000457642 ARHGEF2Q92974 986 aaKnown RBP3.56□□□□□ -1.84
HMGN1P18-201ENST00000457642 ZNF622Q969S3 477 aaKnown RBP eCLIP3.56□□□□□ -1.849e-7■■□□□ 13.5
HMGN1P18-201ENST00000457642 BICD1Q96G01 975 aa3.56□□□□□ -1.84
HMGN1P18-201ENST00000457642 RBM41Q96IZ5 413 aaKnown RBP3.56□□□□□ -1.84
HMGN1P18-201ENST00000457642 MAGEB18Q96M61 343 aa3.56□□□□□ -1.84
HMGN1P18-201ENST00000457642 CFAP57Q96MR6 1250 aa3.56□□□□□ -1.84
HMGN1P18-201ENST00000457642 TGS1Q96RS0 853 aaKnown RBP3.56□□□□□ -1.84
HMGN1P18-201ENST00000457642 CSRNP1Q96S65 589 aa3.56□□□□□ -1.84
HMGN1P18-201ENST00000457642 MXRA8Q9BRK3 442 aa3.56□□□□□ -1.84
HMGN1P18-201ENST00000457642 SYT11Q9BT88 431 aa3.56□□□□□ -1.84
HMGN1P18-201ENST00000457642 WDR18Q9BV38 432 aa3.56□□□□□ -1.84
HMGN1P18-201ENST00000457642 OSBPL7Q9BZF2 842 aa3.56□□□□□ -1.84
HMGN1P18-201ENST00000457642 RANBP17Q9H2T7 1088 aaKnown RBP3.56□□□□□ -1.84
HMGN1P18-201ENST00000457642 CDC42EP4Q9H3Q1 356 aaKnown RBP3.56□□□□□ -1.84
HMGN1P18-201ENST00000457642 ST6GALNAC4Q9H4F1 302 aa3.56□□□□□ -1.84
HMGN1P18-201ENST00000457642 PCIF1Q9H4Z3 704 aa3.56□□□□□ -1.84
HMGN1P18-201ENST00000457642 LRRC19Q9H756 370 aa3.56□□□□□ -1.84
HMGN1P18-201ENST00000457642 DNAJC18Q9H819 358 aa3.56□□□□□ -1.84
HMGN1P18-201ENST00000457642 ECT2Q9H8V3 914 aa3.56□□□□□ -1.84
HMGN1P18-201ENST00000457642 C17orf75Q9HAS0 396 aa3.56□□□□□ -1.84
HMGN1P18-201ENST00000457642 NOD2Q9HC29 1040 aa3.56□□□□□ -1.84
HMGN1P18-201ENST00000457642 KIAA1586Q9HCI6 787 aa3.56□□□□□ -1.84
HMGN1P18-201ENST00000457642 TMEM8AQ9HCN3 771 aa3.56□□□□□ -1.84
HMGN1P18-201ENST00000457642 CD248Q9HCU0 757 aa3.56□□□□□ -1.84
HMGN1P18-201ENST00000457642 POLD4Q9HCU8 107 aa3.56□□□□□ -1.84
HMGN1P18-201ENST00000457642 MRPL47Q9HD33 250 aaKnown RBP3.56□□□□□ -1.84
HMGN1P18-201ENST00000457642 ERVK-5Q9HDB9 667 aa3.56□□□□□ -1.84
HMGN1P18-201ENST00000457642 UBN1Q9NPG3 1134 aa3.56□□□□□ -1.84
HMGN1P18-201ENST00000457642 AVENQ9NQS1 362 aaPredicted RBP3.56□□□□□ -1.84
HMGN1P18-201ENST00000457642 BATF3Q9NR55 127 aa3.56□□□□□ -1.84
HMGN1P18-201ENST00000457642 MAP3K20Q9NYL2 800 aaKnown RBP3.56□□□□□ -1.84
HMGN1P18-201ENST00000457642 GRHL1Q9NZI5 618 aa3.56□□□□□ -1.84
HMGN1P18-201ENST00000457642 SENP1Q9P0U3 644 aa3.56□□□□□ -1.84
HMGN1P18-201ENST00000457642 CNOT8Q9UFF9 292 aaKnown RBP3.56□□□□□ -1.84
HMGN1P18-201ENST00000457642 BAIAP2L1Q9UHR4 511 aa3.56□□□□□ -1.84
HMGN1P18-201ENST00000457642 MCM8Q9UJA3 840 aa3.56□□□□□ -1.84
HMGN1P18-201ENST00000457642 CCPG1Q9ULG6 757 aa3.56□□□□□ -1.84
HMGN1P18-201ENST00000457642 TPX2Q9ULW0 747 aaKnown RBP3.56□□□□□ -1.84
HMGN1P18-201ENST00000457642 COG5Q9UP83 839 aa3.56□□□□□ -1.84
HMGN1P18-201ENST00000457642 SLC12A4Q9UP95 1085 aa3.56□□□□□ -1.84
HMGN1P18-201ENST00000457642 SMG5Q9UPR3 1016 aaKnown RBP3.56□□□□□ -1.84
HMGN1P18-201ENST00000457642 USP20Q9Y2K6 914 aa3.56□□□□□ -1.84
HMGN1P18-201ENST00000457642 PTPN22Q9Y2R2 807 aa3.56□□□□□ -1.84
HMGN1P18-201ENST00000457642 CEP83Q9Y592 693 aa3.56□□□□□ -1.84
HMGN1P18-201ENST00000457642 ACTL7BQ9Y614 415 aa3.56□□□□□ -1.84
HMGN1P18-201ENST00000457642 ZNF536O15090 1300 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 EXOC1LA0A1B0GW35 172 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 TMEM120BA0PK00 339 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 FAM196BA6NMK8 535 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 TCP11X1B4DZS4 312 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 E7ENQ6 273 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 H0YIN7 160 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 DDX39AO00148 427 aaKnown RBP3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 SLC16A4O15374 487 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 CLDN3O15551 220 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 CYP26A1O43174 497 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 ATMINO43313 823 aaPredicted RBP3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 PPIP5K2O43314 1243 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 SNX3O60493 162 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 TCEA3O75764 348 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 DCTN3O75935 186 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 WFS1O76024 890 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 LYPLA2O95372 231 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 SGPL1O95470 568 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 ACSL3O95573 720 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 TTC4O95801 387 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 LMNAP02545 664 aaKnown RBP3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 ICAM1P05362 532 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 CALB1P05937 261 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 CLTAP09496 248 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 FDX1P10109 184 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms