RNA–Protein interactions for RNA: ENST00000457463.1

CNOT3-205, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 3

Gene CNOT3, Length 1,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-205ENST00000457463 LIG4P49917 911 aa13.37□□□□□ -0.27
CNOT3-205ENST00000457463 BCAR1P56945 870 aa13.37□□□□□ -0.27
CNOT3-205ENST00000457463 MCL1Q07820 350 aa13.37□□□□□ -0.27
CNOT3-205ENST00000457463 GLRA4Q5JXX5 417 aa13.37□□□□□ -0.27
CNOT3-205ENST00000457463 MICALL1Q8N3F8 863 aa13.37□□□□□ -0.27
CNOT3-205ENST00000457463 ZSWIM2Q8NEG5 633 aa13.37□□□□□ -0.27
CNOT3-205ENST00000457463 SPPL3Q8TCT6 385 aa13.37□□□□□ -0.27
CNOT3-205ENST00000457463 PPM1EQ8WY54 764 aa13.37□□□□□ -0.27
CNOT3-205ENST00000457463 RABGGTAQ92696 567 aa13.37□□□□□ -0.27
CNOT3-205ENST00000457463 ERCC4Q92889 916 aaPredicted RBP13.37□□□□□ -0.27
CNOT3-205ENST00000457463 GAS2L1Q99501 681 aaPredicted RBP13.37□□□□□ -0.27
CNOT3-205ENST00000457463 MRPL9Q9BYD2 267 aaKnown RBP13.37□□□□□ -0.27
CNOT3-205ENST00000457463 SLC39A2Q9NP94 309 aa13.37□□□□□ -0.27
CNOT3-205ENST00000457463 SEL1LQ9UBV2 794 aa13.37□□□□□ -0.27
CNOT3-205ENST00000457463 PCDHGC5Q9Y5F6 944 aa13.37□□□□□ -0.27
CNOT3-205ENST00000457463 TRANK1O15050 2925 aa13.36□□□□□ -0.27
CNOT3-205ENST00000457463 REV3LO60673 3130 aa13.36□□□□□ -0.27
CNOT3-205ENST00000457463 NLRC5Q86WI3 1866 aa13.36□□□□□ -0.27
CNOT3-205ENST00000457463 GOLGA6L4A6NEF3 574 aa13.36□□□□□ -0.27
CNOT3-205ENST00000457463 CLDN3O15551 220 aa13.36□□□□□ -0.27
CNOT3-205ENST00000457463 GTPBP6O43824 516 aaPredicted RBP13.36□□□□□ -0.27
CNOT3-205ENST00000457463 FAM189A1O60320 539 aa13.36□□□□□ -0.27
CNOT3-205ENST00000457463 NR1I2O75469 434 aa13.36□□□□□ -0.27
CNOT3-205ENST00000457463 RB1P06400 928 aa13.36□□□□□ -0.27
CNOT3-205ENST00000457463 LAG3P18627 525 aa13.36□□□□□ -0.27
CNOT3-205ENST00000457463 IGFBP6P24592 240 aaPredicted RBP13.36□□□□□ -0.27
CNOT3-205ENST00000457463 ADSSP30520 456 aa13.36□□□□□ -0.27
CNOT3-205ENST00000457463 IRS1P35568 1242 aa13.36□□□□□ -0.27
CNOT3-205ENST00000457463 MATR3P43243 847 aaKnown RBP eCLIP13.36□□□□□ -0.27
CNOT3-205ENST00000457463 RNASELQ05823 741 aaKnown RBP13.36□□□□□ -0.27
CNOT3-205ENST00000457463 STK4Q13043 487 aa13.36□□□□□ -0.27
CNOT3-205ENST00000457463 NOLC1Q14978 699 aaKnown RBP eCLIP13.36□□□□□ -0.27
CNOT3-205ENST00000457463 NAB2Q15742 525 aa13.36□□□□□ -0.27
CNOT3-205ENST00000457463 CCDC85BQ15834 202 aaPredicted RBP13.36□□□□□ -0.27
CNOT3-205ENST00000457463 KMT5BQ4FZB7 885 aa13.36□□□□□ -0.27
CNOT3-205ENST00000457463 FAM26FQ5R3K3 315 aa13.36□□□□□ -0.27
CNOT3-205ENST00000457463 L1TD1Q5T7N2 865 aaKnown RBP13.36□□□□□ -0.27
CNOT3-205ENST00000457463 COLGALT2Q8IYK4 626 aa13.36□□□□□ -0.27
CNOT3-205ENST00000457463 SLC39A11Q8N1S5 342 aa13.36□□□□□ -0.27
CNOT3-205ENST00000457463 TMEM87AQ8NBN3 555 aa13.36□□□□□ -0.27
CNOT3-205ENST00000457463 URGCPQ8TCY9 931 aa13.36□□□□□ -0.27
CNOT3-205ENST00000457463 POF1BQ8WVV4 589 aa13.36□□□□□ -0.27
CNOT3-205ENST00000457463 ZMAT2Q96NC0 199 aaKnown RBP13.36□□□□□ -0.27
CNOT3-205ENST00000457463 PAAF1Q9BRP4 392 aa13.36□□□□□ -0.27
CNOT3-205ENST00000457463 PLVAPQ9BX97 442 aa13.36□□□□□ -0.27
CNOT3-205ENST00000457463 UBN1Q9NPG3 1134 aa13.36□□□□□ -0.27
CNOT3-205ENST00000457463 USP25Q9UHP3 1055 aa13.36□□□□□ -0.27
CNOT3-205ENST00000457463 STXBP5LQ9Y2K9 1186 aa13.36□□□□□ -0.27
CNOT3-205ENST00000457463 RWDD3Q9Y3V2 267 aa13.36□□□□□ -0.27
CNOT3-205ENST00000457463 MYO9BQ13459 2157 aa13.36□□□□□ -0.27
CNOT3-205ENST00000457463 ZMYM2Q9UBW7 1377 aa13.35□□□□□ -0.27
CNOT3-205ENST00000457463 PVALEFA0A1B0GWK0 134 aa13.35□□□□□ -0.27
CNOT3-205ENST00000457463 PRPF40AO75400 957 aaKnown RBP13.35□□□□□ -0.27
CNOT3-205ENST00000457463 FGF18O76093 207 aa13.35□□□□□ -0.27
CNOT3-205ENST00000457463 FAM160A1Q05DH4 1040 aa13.35□□□□□ -0.27
CNOT3-205ENST00000457463 SPAG1Q07617 926 aa13.35□□□□□ -0.27
CNOT3-205ENST00000457463 DSC1Q08554 894 aa13.35□□□□□ -0.27
CNOT3-205ENST00000457463 DPYDQ12882 1025 aa13.35□□□□□ -0.27
CNOT3-205ENST00000457463 SLC10A6Q3KNW5 377 aa13.35□□□□□ -0.27
CNOT3-205ENST00000457463 ALKAL1Q6UXT8 129 aa13.35□□□□□ -0.27
CNOT3-205ENST00000457463 EPM2AIP1Q7L775 607 aaPredicted RBP13.35□□□□□ -0.27
CNOT3-205ENST00000457463 HACE1Q8IYU2 909 aa13.35□□□□□ -0.27
CNOT3-205ENST00000457463 KIAA0895Q8NCT3 520 aa13.35□□□□□ -0.27
CNOT3-205ENST00000457463 SCFD1Q8WVM8 642 aa13.35□□□□□ -0.27
CNOT3-205ENST00000457463 P2RX5Q93086 422 aa13.35□□□□□ -0.27
CNOT3-205ENST00000457463 ZNF558Q96NG5 402 aa13.35□□□□□ -0.27
CNOT3-205ENST00000457463 ACCSQ96QU6 501 aa13.35□□□□□ -0.27
CNOT3-205ENST00000457463 C11orf84Q9BUA3 381 aaPredicted RBP13.35□□□□□ -0.27
CNOT3-205ENST00000457463 VN1R3Q9BXE9 311 aa13.35□□□□□ -0.27
CNOT3-205ENST00000457463 MARCH5Q9NX47 278 aa13.35□□□□□ -0.27
CNOT3-205ENST00000457463 PRG3Q9Y2Y8 225 aaPredicted RBP13.35□□□□□ -0.27
CNOT3-205ENST00000457463 PCDHB13Q9Y5F0 798 aa13.35□□□□□ -0.27
CNOT3-205ENST00000457463 PCDHB12Q9Y5F1 795 aa13.35□□□□□ -0.27
CNOT3-205ENST00000457463 A0A0B4J269 797 aa13.34□□□□□ -0.27
CNOT3-205ENST00000457463 CASTOR2A6NHX0 329 aa13.34□□□□□ -0.27
CNOT3-205ENST00000457463 NRP1O14786 923 aa13.34□□□□□ -0.27
CNOT3-205ENST00000457463 RPN1P04843 607 aaKnown RBP13.34□□□□□ -0.27
CNOT3-205ENST00000457463 CXCL8P10145 99 aa13.34□□□□□ -0.27
CNOT3-205ENST00000457463 POU3F3P20264 500 aaPredicted RBP13.34□□□□□ -0.27
CNOT3-205ENST00000457463 ACOT2P49753 483 aa13.34□□□□□ -0.27
CNOT3-205ENST00000457463 ERVFC1P60507 584 aa13.34□□□□□ -0.27
CNOT3-205ENST00000457463 PNOCQ13519 176 aa13.34□□□□□ -0.27
CNOT3-205ENST00000457463 XKR4Q5GH76 650 aa13.34□□□□□ -0.27
CNOT3-205ENST00000457463 NELFCDQ8IXH7 590 aa13.34□□□□□ -0.27
CNOT3-205ENST00000457463 SLC17A8Q8NDX2 589 aa13.34□□□□□ -0.27
CNOT3-205ENST00000457463 HVCN1Q96D96 273 aa13.34□□□□□ -0.27
CNOT3-205ENST00000457463 SNX27Q96L92 541 aa13.34□□□□□ -0.27
CNOT3-205ENST00000457463 ACAP3Q96P50 834 aa13.34□□□□□ -0.27
CNOT3-205ENST00000457463 RPS6KC1Q96S38 1066 aa13.34□□□□□ -0.27
CNOT3-205ENST00000457463 CBWD1Q9BRT8 395 aa13.34□□□□□ -0.27
CNOT3-205ENST00000457463 MSTO1Q9BUK6 570 aa13.34□□□□□ -0.27
CNOT3-205ENST00000457463 CCDC94Q9BW85 323 aaPredicted RBP13.34□□□□□ -0.27
CNOT3-205ENST00000457463 GOLGA2P5Q9HBQ8 144 aa13.34□□□□□ -0.27
CNOT3-205ENST00000457463 PRDM6Q9NQX0 595 aa13.34□□□□□ -0.27
CNOT3-205ENST00000457463 AAASQ9NRG9 546 aa13.34□□□□□ -0.27
CNOT3-205ENST00000457463 KANSL3Q9P2N6 904 aa13.34□□□□□ -0.27
CNOT3-205ENST00000457463 STYXL1Q9Y6J8 313 aa13.34□□□□□ -0.27
CNOT3-205ENST00000457463 RALGAPA2Q2PPJ7 1873 aa13.33□□□□□ -0.27
CNOT3-205ENST00000457463 PRUNE2Q8WUY3 3088 aa13.33□□□□□ -0.27
CNOT3-205ENST00000457463 SMIM28A0A1B0GU29 152 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms