RNA–Protein interactions for RNA: ENST00000457356.8

MSC-AS1-201, MSC antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene MSC-AS1, Length 4,220 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSC-AS1-201ENST00000457356 NFX1Q12986 1120 aaKnown RBP10.36□□□□□ -0.75
MSC-AS1-201ENST00000457356 QRICH1Q2TAL8 776 aa10.36□□□□□ -0.75
MSC-AS1-201ENST00000457356 TRIM51Q9BSJ1 452 aa10.36□□□□□ -0.75
MSC-AS1-201ENST00000457356 RTFDC1Q9BY42 306 aaPredicted RBP10.36□□□□□ -0.75
MSC-AS1-201ENST00000457356 SLC13A1Q9BZW2 595 aa10.36□□□□□ -0.75
MSC-AS1-201ENST00000457356 NDE1Q9NXR1 346 aa10.36□□□□□ -0.75
MSC-AS1-201ENST00000457356 DMGDHQ9UI17 866 aaKnown RBP10.36□□□□□ -0.75
MSC-AS1-201ENST00000457356 TLK1Q9UKI8 766 aa10.36□□□□□ -0.75
MSC-AS1-201ENST00000457356 MRC1P22897 1456 aa10.36□□□□□ -0.75
MSC-AS1-201ENST00000457356 GCLMP48507 274 aa10.36□□□□□ -0.75
MSC-AS1-201ENST00000457356 MDM2Q00987 491 aaPredicted RBP10.36□□□□□ -0.75
MSC-AS1-201ENST00000457356 KDSRQ06136 332 aa10.36□□□□□ -0.75
MSC-AS1-201ENST00000457356 DMP1Q13316 513 aaPredicted RBP10.36□□□□□ -0.75
MSC-AS1-201ENST00000457356 NCAPHQ15003 741 aa10.36□□□□□ -0.75
MSC-AS1-201ENST00000457356 SPOPLQ6IQ16 392 aa10.36□□□□□ -0.75
MSC-AS1-201ENST00000457356 DNAJC24Q6P3W2 148 aa10.36□□□□□ -0.75
MSC-AS1-201ENST00000457356 PDXDC2PQ6P474 469 aa10.36□□□□□ -0.75
MSC-AS1-201ENST00000457356 TMEM154Q6P9G4 183 aa10.36□□□□□ -0.75
MSC-AS1-201ENST00000457356 SPATA21Q7Z572 469 aa10.36□□□□□ -0.75
MSC-AS1-201ENST00000457356 RASSF3Q86WH2 238 aa10.36□□□□□ -0.75
MSC-AS1-201ENST00000457356 C9orf72Q96LT7 481 aa10.36□□□□□ -0.75
MSC-AS1-201ENST00000457356 DRC3Q9H069 523 aa10.36□□□□□ -0.75
MSC-AS1-201ENST00000457356 FGFR1OP2Q9NVK5 253 aa10.36□□□□□ -0.75
MSC-AS1-201ENST00000457356 APOBEC2Q9Y235 224 aaKnown RBP10.36□□□□□ -0.75
MSC-AS1-201ENST00000457356 FTLP02792 175 aaPredicted RBP10.36□□□□□ -0.75
MSC-AS1-201ENST00000457356 YBX3P16989 372 aaKnown RBP eCLIP10.36□□□□□ -0.75
MSC-AS1-201ENST00000457356 DYNC1I2Q13409 638 aaKnown RBP10.36□□□□□ -0.75
MSC-AS1-201ENST00000457356 SBK1Q52WX2 424 aa10.36□□□□□ -0.75
MSC-AS1-201ENST00000457356 TRPM8Q7Z2W7 1104 aa10.36□□□□□ -0.75
MSC-AS1-201ENST00000457356 CDAN1Q8IWY9 1227 aa10.36□□□□□ -0.75
MSC-AS1-201ENST00000457356 MB21D2Q8IYB1 491 aaPredicted RBP10.36□□□□□ -0.75
MSC-AS1-201ENST00000457356 PPM1NQ8N819 430 aa10.36□□□□□ -0.75
MSC-AS1-201ENST00000457356 FAM193BQ96PV7 902 aaPredicted RBP10.36□□□□□ -0.75
MSC-AS1-201ENST00000457356 RIOK1Q9BRS2 568 aaKnown RBP10.36□□□□□ -0.75
MSC-AS1-201ENST00000457356 PARVGQ9HBI0 331 aa10.36□□□□□ -0.75
MSC-AS1-201ENST00000457356 FBXO28Q9NVF7 368 aa10.36□□□□□ -0.75
MSC-AS1-201ENST00000457356 LRFN2Q9ULH4 789 aa10.36□□□□□ -0.75
MSC-AS1-201ENST00000457356 CXCL11O14625 94 aa10.35□□□□□ -0.75
MSC-AS1-201ENST00000457356 ORC4O43929 436 aa10.35□□□□□ -0.75
MSC-AS1-201ENST00000457356 KRT37O76014 449 aa10.35□□□□□ -0.75
MSC-AS1-201ENST00000457356 SLC25A27O95847 323 aa10.35□□□□□ -0.75
MSC-AS1-201ENST00000457356 FAM107AO95990 144 aa10.35□□□□□ -0.75
MSC-AS1-201ENST00000457356 GYPCP04921 128 aa10.35□□□□□ -0.75
MSC-AS1-201ENST00000457356 KRT3P12035 628 aa10.35□□□□□ -0.75
MSC-AS1-201ENST00000457356 GCFC2P16383 781 aaKnown RBP10.35□□□□□ -0.75
MSC-AS1-201ENST00000457356 NOP14P78316 857 aaKnown RBP10.35□□□□□ -0.75
MSC-AS1-201ENST00000457356 DEUP1Q05D60 604 aa10.35□□□□□ -0.75
MSC-AS1-201ENST00000457356 IFRD2Q12894 506 aaPredicted RBP10.35□□□□□ -0.75
MSC-AS1-201ENST00000457356 MTM1Q13496 603 aa10.35□□□□□ -0.75
MSC-AS1-201ENST00000457356 APOBEC3HQ6NTF7 200 aaKnown RBP10.35□□□□□ -0.75
MSC-AS1-201ENST00000457356 RINT1Q6NUQ1 792 aa10.35□□□□□ -0.75
MSC-AS1-201ENST00000457356 CYB5D1Q6P9G0 228 aa10.35□□□□□ -0.75
MSC-AS1-201ENST00000457356 ZBTB8OSQ8IWT0 167 aa10.35□□□□□ -0.75
MSC-AS1-201ENST00000457356 BTBD6Q96KE9 485 aa10.35□□□□□ -0.75
MSC-AS1-201ENST00000457356 XPO6Q96QU8 1125 aaKnown RBP10.35□□□□□ -0.75
MSC-AS1-201ENST00000457356 SEPT9Q9UHD8 586 aaPredicted RBP10.35□□□□□ -0.75
MSC-AS1-201ENST00000457356 ARL2BPQ9Y2Y0 163 aa10.35□□□□□ -0.75
MSC-AS1-201ENST00000457356 PPME1Q9Y570 386 aa10.35□□□□□ -0.75
MSC-AS1-201ENST00000457356 NUB1Q9Y5A7 615 aa10.35□□□□□ -0.75
MSC-AS1-201ENST00000457356 ZNF609O15014 1411 aa10.35□□□□□ -0.75
MSC-AS1-201ENST00000457356 RNF103-CHMP3A0A140T963 221 aa10.35□□□□□ -0.75
MSC-AS1-201ENST00000457356 IQANK1A0A1B0GTG1 560 aa10.35□□□□□ -0.75
MSC-AS1-201ENST00000457356 MIF4GDA9UHW6 222 aaKnown RBP10.35□□□□□ -0.75
MSC-AS1-201ENST00000457356 STXBP3O00186 592 aa10.35□□□□□ -0.75
MSC-AS1-201ENST00000457356 DYNC1LI2O43237 492 aaPredicted RBP10.35□□□□□ -0.75
MSC-AS1-201ENST00000457356 RASA1P20936 1047 aa10.35□□□□□ -0.75
MSC-AS1-201ENST00000457356 STX1BP61266 288 aa10.35□□□□□ -0.75
MSC-AS1-201ENST00000457356 OCRLQ01968 901 aa10.35□□□□□ -0.75
MSC-AS1-201ENST00000457356 CUL3Q13618 768 aa10.35□□□□□ -0.75
MSC-AS1-201ENST00000457356 CTTNQ14247 550 aaKnown RBP10.35□□□□□ -0.75
MSC-AS1-201ENST00000457356 ATG16L1Q676U5 607 aa10.35□□□□□ -0.75
MSC-AS1-201ENST00000457356 C16orf87Q6PH81 154 aa10.35□□□□□ -0.75
MSC-AS1-201ENST00000457356 USP17L6PQ6QN14 398 aa10.35□□□□□ -0.75
MSC-AS1-201ENST00000457356 C16orf86Q6ZW13 317 aa10.35□□□□□ -0.75
MSC-AS1-201ENST00000457356 CERS5Q8N5B7 392 aa10.35□□□□□ -0.75
MSC-AS1-201ENST00000457356 C7orf31Q8N865 590 aa10.35□□□□□ -0.75
MSC-AS1-201ENST00000457356 SLC7A3Q8WY07 619 aa10.35□□□□□ -0.75
MSC-AS1-201ENST00000457356 DPF3Q92784 378 aa10.35□□□□□ -0.75
MSC-AS1-201ENST00000457356 ERP27Q96DN0 273 aa10.35□□□□□ -0.75
MSC-AS1-201ENST00000457356 SERPINI1Q99574 410 aa10.35□□□□□ -0.75
MSC-AS1-201ENST00000457356 DUSP10Q9Y6W6 482 aa10.35□□□□□ -0.75
MSC-AS1-201ENST00000457356 A6NJR5 290 aa10.35□□□□□ -0.75
MSC-AS1-201ENST00000457356 CCDC85CA6NKD9 419 aa10.35□□□□□ -0.75
MSC-AS1-201ENST00000457356 PDHBP11177 359 aa10.35□□□□□ -0.75
MSC-AS1-201ENST00000457356 PGM1P36871 562 aa10.35□□□□□ -0.75
MSC-AS1-201ENST00000457356 BAATQ14032 418 aaPredicted RBP10.35□□□□□ -0.75
MSC-AS1-201ENST00000457356 VGLL4Q14135 290 aa10.35□□□□□ -0.75
MSC-AS1-201ENST00000457356 CYTH1Q15438 398 aa10.35□□□□□ -0.75
MSC-AS1-201ENST00000457356 NUDCD3Q8IVD9 361 aa10.35□□□□□ -0.75
MSC-AS1-201ENST00000457356 KCTD6Q8NC69 237 aa10.35□□□□□ -0.75
MSC-AS1-201ENST00000457356 HNRNPLLQ8WVV9 542 aaKnown RBP10.35□□□□□ -0.75
MSC-AS1-201ENST00000457356 ANO3Q9BYT9 981 aa10.35□□□□□ -0.75
MSC-AS1-201ENST00000457356 ZWILCHQ9H900 591 aa10.35□□□□□ -0.75
MSC-AS1-201ENST00000457356 NOD2Q9HC29 1040 aa10.35□□□□□ -0.75
MSC-AS1-201ENST00000457356 USP15Q9Y4E8 981 aaPredicted RBP10.35□□□□□ -0.75
MSC-AS1-201ENST00000457356 ABCB11O95342 1321 aa10.35□□□□□ -0.75
MSC-AS1-201ENST00000457356 PALM3A6NDB9 673 aaPredicted RBP10.34□□□□□ -0.75
MSC-AS1-201ENST00000457356 IPO5O00410 1097 aaKnown RBP10.34□□□□□ -0.75
MSC-AS1-201ENST00000457356 SERPINB4P48594 390 aa10.34□□□□□ -0.75
MSC-AS1-201ENST00000457356 GPC5P78333 572 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms