RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 DDX12PQ92771 950 aa19.81■□□□□ 0.76
PDLIM2-215ENST00000456545 CDCA3Q99618 268 aaPredicted RBP19.81■□□□□ 0.76
PDLIM2-215ENST00000456545 COL25A1Q9BXS0 654 aaPredicted RBP19.81■□□□□ 0.76
PDLIM2-215ENST00000456545 CDT1Q9H211 546 aa19.81■□□□□ 0.76
PDLIM2-215ENST00000456545 TOPORSQ9NS56 1045 aaPredicted RBP19.81■□□□□ 0.76
PDLIM2-215ENST00000456545 ANKFY1Q9P2R3 1169 aa19.81■□□□□ 0.76
PDLIM2-215ENST00000456545 FAM50BQ9Y247 325 aa19.81■□□□□ 0.76
PDLIM2-215ENST00000456545 ZMYM2Q9UBW7 1377 aa19.81■□□□□ 0.76
PDLIM2-215ENST00000456545 LINC01565O15544 149 aa19.8■□□□□ 0.76
PDLIM2-215ENST00000456545 B4GALT3O60512 393 aa19.8■□□□□ 0.76
PDLIM2-215ENST00000456545 TOM1L1O75674 476 aa19.8■□□□□ 0.76
PDLIM2-215ENST00000456545 BRD1O95696 1058 aa19.8■□□□□ 0.76
PDLIM2-215ENST00000456545 IDEP14735 1019 aa19.8■□□□□ 0.76
PDLIM2-215ENST00000456545 GRM5P41594 1212 aa19.8■□□□□ 0.76
PDLIM2-215ENST00000456545 ZNF131P52739 623 aa19.8■□□□□ 0.76
PDLIM2-215ENST00000456545 ZPBP2Q6X784 338 aa19.8■□□□□ 0.76
PDLIM2-215ENST00000456545 MRPL43Q8N983 215 aaKnown RBP19.8■□□□□ 0.76
PDLIM2-215ENST00000456545 IQUBQ8NA54 791 aa19.8■□□□□ 0.76
PDLIM2-215ENST00000456545 ZBTB45Q96K62 511 aaPredicted RBP19.8■□□□□ 0.76
PDLIM2-215ENST00000456545 ACAP3Q96P50 834 aa19.8■□□□□ 0.76
PDLIM2-215ENST00000456545 TBX20Q9UMR3 447 aa19.8■□□□□ 0.76
PDLIM2-215ENST00000456545 PCDHA7Q9UN72 937 aa19.8■□□□□ 0.76
PDLIM2-215ENST00000456545 PRUNE2Q8WUY3 3088 aa19.79■□□□□ 0.76
PDLIM2-215ENST00000456545 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.79■□□□□ 0.76
PDLIM2-215ENST00000456545 MYMKA6NI61 221 aa19.79■□□□□ 0.76
PDLIM2-215ENST00000456545 HIDE1A8MVS5 230 aa19.79■□□□□ 0.76
PDLIM2-215ENST00000456545 TADA2AO75478 443 aa19.79■□□□□ 0.76
PDLIM2-215ENST00000456545 BMP1P13497 986 aa19.79■□□□□ 0.76
PDLIM2-215ENST00000456545 GAP43P17677 238 aa19.79■□□□□ 0.76
PDLIM2-215ENST00000456545 KRT85P78386 507 aa19.79■□□□□ 0.76
PDLIM2-215ENST00000456545 AMPD3Q01432 767 aa19.79■□□□□ 0.76
PDLIM2-215ENST00000456545 DSC1Q08554 894 aa19.79■□□□□ 0.76
PDLIM2-215ENST00000456545 TUSC3Q13454 348 aa19.79■□□□□ 0.76
PDLIM2-215ENST00000456545 CLUL1Q15846 466 aa19.79■□□□□ 0.76
PDLIM2-215ENST00000456545 DUSP6Q16828 381 aa19.79■□□□□ 0.76
PDLIM2-215ENST00000456545 CTC1Q2NKJ3 1217 aa19.79■□□□□ 0.76
PDLIM2-215ENST00000456545 PTCRAQ6ISU1 281 aaPredicted RBP19.79■□□□□ 0.76
PDLIM2-215ENST00000456545 KIAA1841Q6NSI8 718 aa19.79■□□□□ 0.76
PDLIM2-215ENST00000456545 GSTCDQ8NEC7 633 aa19.79■□□□□ 0.76
PDLIM2-215ENST00000456545 ADAMTS19Q8TE59 1207 aa19.79■□□□□ 0.76
PDLIM2-215ENST00000456545 BCL7CQ8WUZ0 217 aaPredicted RBP19.79■□□□□ 0.76
PDLIM2-215ENST00000456545 DHX58Q96C10 678 aa19.79■□□□□ 0.76
PDLIM2-215ENST00000456545 PTPRHQ9HD43 1115 aa19.79■□□□□ 0.76
PDLIM2-215ENST00000456545 RCOR1Q9UKL0 485 aa19.79■□□□□ 0.76
PDLIM2-215ENST00000456545 ATG2AQ2TAZ0 1938 aa19.78■□□□□ 0.76
PDLIM2-215ENST00000456545 TCF20Q9UGU0 1960 aaKnown RBP19.78■□□□□ 0.76
PDLIM2-215ENST00000456545 A0A087X0B3 334 aa19.78■□□□□ 0.76
PDLIM2-215ENST00000456545 HNRNPDLO14979 420 aaKnown RBP19.78■□□□□ 0.76
PDLIM2-215ENST00000456545 CTSAP10619 480 aa19.78■□□□□ 0.76
PDLIM2-215ENST00000456545 NMT1P30419 496 aaKnown RBP19.78■□□□□ 0.76
PDLIM2-215ENST00000456545 NOLC1Q14978 699 aaKnown RBP eCLIP19.78■□□□□ 0.76
PDLIM2-215ENST00000456545 HERC4Q5GLZ8 1057 aaPredicted RBP19.78■□□□□ 0.76
PDLIM2-215ENST00000456545 LLGL2Q6P1M3 1020 aa19.78■□□□□ 0.76
PDLIM2-215ENST00000456545 SHC4Q6S5L8 630 aa19.78■□□□□ 0.76
PDLIM2-215ENST00000456545 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.78■□□□□ 0.76
PDLIM2-215ENST00000456545 AUTS2Q8WXX7 1259 aa19.78■□□□□ 0.76
PDLIM2-215ENST00000456545 RABGGTAQ92696 567 aa19.78■□□□□ 0.76
PDLIM2-215ENST00000456545 SPATA32Q96LK8 384 aa19.78■□□□□ 0.76
PDLIM2-215ENST00000456545 ZBP1Q9H171 429 aa19.78■□□□□ 0.76
PDLIM2-215ENST00000456545 CUEDC2Q9H467 287 aa19.78■□□□□ 0.76
PDLIM2-215ENST00000456545 MRPL44Q9H9J2 332 aaKnown RBP19.78■□□□□ 0.76
PDLIM2-215ENST00000456545 MRPL17Q9NRX2 175 aaKnown RBP19.78■□□□□ 0.76
PDLIM2-215ENST00000456545 SEL1LQ9UBV2 794 aa19.78■□□□□ 0.76
PDLIM2-215ENST00000456545 SSX2IPQ9Y2D8 614 aa19.78■□□□□ 0.76
PDLIM2-215ENST00000456545 C2orf71A6NGG8 1288 aa19.77■□□□□ 0.76
PDLIM2-215ENST00000456545 CASTOR2A6NHX0 329 aa19.77■□□□□ 0.76
PDLIM2-215ENST00000456545 URODP06132 367 aa19.77■□□□□ 0.76
PDLIM2-215ENST00000456545 PROZP22891 400 aa19.77■□□□□ 0.76
PDLIM2-215ENST00000456545 LTBRP36941 435 aa19.77■□□□□ 0.76
PDLIM2-215ENST00000456545 COL19A1Q14993 1142 aa19.77■□□□□ 0.76
PDLIM2-215ENST00000456545 GLRA4Q5JXX5 417 aa19.77■□□□□ 0.76
PDLIM2-215ENST00000456545 SFR1Q86XK3 245 aa19.77■□□□□ 0.76
PDLIM2-215ENST00000456545 CCDC65Q8IXS2 484 aa19.77■□□□□ 0.76
PDLIM2-215ENST00000456545 CEP120Q8N960 986 aa19.77■□□□□ 0.76
PDLIM2-215ENST00000456545 STAMQ92783 540 aa19.77■□□□□ 0.76
PDLIM2-215ENST00000456545 UHRF1Q96T88 793 aaPredicted RBP19.77■□□□□ 0.76
PDLIM2-215ENST00000456545 EMILIN2Q9BXX0 1053 aa19.77■□□□□ 0.76
PDLIM2-215ENST00000456545 PANK4Q9NVE7 773 aa19.77■□□□□ 0.76
PDLIM2-215ENST00000456545 TBC1D7Q9P0N9 293 aa19.77■□□□□ 0.76
PDLIM2-215ENST00000456545 CD207Q9UJ71 328 aa19.77■□□□□ 0.76
PDLIM2-215ENST00000456545 C2CD2LO14523 706 aa19.76■□□□□ 0.75
PDLIM2-215ENST00000456545 PTGESO14684 152 aa19.76■□□□□ 0.75
PDLIM2-215ENST00000456545 POLR2DO15514 142 aaKnown RBP19.76■□□□□ 0.75
PDLIM2-215ENST00000456545 GTF2BQ00403 316 aa19.76■□□□□ 0.75
PDLIM2-215ENST00000456545 DLX2Q07687 328 aaPredicted RBP19.76■□□□□ 0.75
PDLIM2-215ENST00000456545 HSP90AA2PQ14568 343 aaPredicted RBP19.76■□□□□ 0.75
PDLIM2-215ENST00000456545 ZC2HC1CQ53FD0 456 aaPredicted RBP19.76■□□□□ 0.75
PDLIM2-215ENST00000456545 AXDND1Q5T1B0 1012 aaPredicted RBP19.76■□□□□ 0.75
PDLIM2-215ENST00000456545 PYM1Q9BRP8 204 aaKnown RBP19.76■□□□□ 0.75
PDLIM2-215ENST00000456545 ADAM28Q9UKQ2 775 aa19.76■□□□□ 0.75
PDLIM2-215ENST00000456545 ZDHHC9Q9Y397 364 aa19.76■□□□□ 0.75
PDLIM2-215ENST00000456545 TBX10O75333 385 aa19.75■□□□□ 0.75
PDLIM2-215ENST00000456545 GCNT3O95395 438 aa19.75■□□□□ 0.75
PDLIM2-215ENST00000456545 SOD2P04179 222 aa19.75■□□□□ 0.75
PDLIM2-215ENST00000456545 MCL1Q07820 350 aa19.75■□□□□ 0.75
PDLIM2-215ENST00000456545 KYAT1Q16773 422 aa19.75■□□□□ 0.75
PDLIM2-215ENST00000456545 TPRNQ4KMQ1 711 aa19.75■□□□□ 0.75
PDLIM2-215ENST00000456545 SEZ6Q53EL9 994 aa19.75■□□□□ 0.75
PDLIM2-215ENST00000456545 ZNF720Q7Z2F6 126 aa19.75■□□□□ 0.75
PDLIM2-215ENST00000456545 DNAJC19Q96DA6 116 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms