RNA–Protein interactions for RNA: ENST00000455551.6

SEMA4D-213, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 3,594 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-213ENST00000455551 CYFIP1Q7L576 1253 aa13.13□□□□□ -0.31
SEMA4D-213ENST00000455551 EFCAB13Q8IY85 973 aa13.13□□□□□ -0.31
SEMA4D-213ENST00000455551 CCDC105Q8IYK2 499 aa13.13□□□□□ -0.31
SEMA4D-213ENST00000455551 ARFGAP2Q8N6H7 521 aa13.13□□□□□ -0.31
SEMA4D-213ENST00000455551 VTI1AQ96AJ9 217 aa13.13□□□□□ -0.31
SEMA4D-213ENST00000455551 FAM187AA6NFU0 413 aa13.13□□□□□ -0.31
SEMA4D-213ENST00000455551 MAPK13O15264 365 aa13.13□□□□□ -0.31
SEMA4D-213ENST00000455551 GZMAP12544 262 aa13.13□□□□□ -0.31
SEMA4D-213ENST00000455551 CCND2P30279 289 aa13.13□□□□□ -0.31
SEMA4D-213ENST00000455551 SSTR3P32745 418 aaPredicted RBP13.13□□□□□ -0.31
SEMA4D-213ENST00000455551 PTGIRP43119 386 aa13.13□□□□□ -0.31
SEMA4D-213ENST00000455551 HMGCS2P54868 508 aa13.13□□□□□ -0.31
SEMA4D-213ENST00000455551 CDR2Q01850 454 aa13.13□□□□□ -0.31
SEMA4D-213ENST00000455551 SF3B2Q13435 895 aaKnown RBP13.13□□□□□ -0.31
SEMA4D-213ENST00000455551 BIRC3Q13489 604 aa13.13□□□□□ -0.31
SEMA4D-213ENST00000455551 TNFAIP1Q13829 316 aa13.13□□□□□ -0.31
SEMA4D-213ENST00000455551 DHX34Q14147 1143 aaKnown RBP13.13□□□□□ -0.31
SEMA4D-213ENST00000455551 TADA2BQ86TJ2 420 aa13.13□□□□□ -0.31
SEMA4D-213ENST00000455551 PACS2Q86VP3 889 aa13.13□□□□□ -0.31
SEMA4D-213ENST00000455551 C1orf131Q8NDD1 294 aaKnown RBP13.13□□□□□ -0.31
SEMA4D-213ENST00000455551 TIPINQ9BVW5 301 aa13.13□□□□□ -0.31
SEMA4D-213ENST00000455551 PPP1R1BQ9UD71 204 aaPredicted RBP13.13□□□□□ -0.31
SEMA4D-213ENST00000455551 CAND2O75155 1236 aa13.12□□□□□ -0.31
SEMA4D-213ENST00000455551 PPP2R2AP63151 447 aa13.12□□□□□ -0.31
SEMA4D-213ENST00000455551 MTERF2Q49AM1 385 aa13.12□□□□□ -0.31
SEMA4D-213ENST00000455551 VSIG10LQ86VR7 867 aa13.12□□□□□ -0.31
SEMA4D-213ENST00000455551 CCDC60Q8IWA6 550 aaPredicted RBP13.12□□□□□ -0.31
SEMA4D-213ENST00000455551 RPS6KC1Q96S38 1066 aa13.12□□□□□ -0.31
SEMA4D-213ENST00000455551 GJA3Q9Y6H8 435 aa13.12□□□□□ -0.31
SEMA4D-213ENST00000455551 RGS20O76081 388 aa13.12□□□□□ -0.31
SEMA4D-213ENST00000455551 CHRNA3P32297 505 aa13.12□□□□□ -0.31
SEMA4D-213ENST00000455551 GPC3P51654 580 aa13.12□□□□□ -0.31
SEMA4D-213ENST00000455551 PMS2P54278 862 aa13.12□□□□□ -0.31
SEMA4D-213ENST00000455551 PPP2R5EQ16537 467 aa13.12□□□□□ -0.31
SEMA4D-213ENST00000455551 DAB2IPQ5VWQ8 1189 aa13.12□□□□□ -0.31
SEMA4D-213ENST00000455551 OTUD6AQ7L8S5 288 aa13.12□□□□□ -0.31
SEMA4D-213ENST00000455551 MDM1Q8TC05 714 aa13.12□□□□□ -0.31
SEMA4D-213ENST00000455551 PPM1EQ8WY54 764 aa13.12□□□□□ -0.31
SEMA4D-213ENST00000455551 WNT8AQ9H1J5 351 aa13.12□□□□□ -0.31
SEMA4D-213ENST00000455551 XPNPEP1Q9NQW7 623 aa13.12□□□□□ -0.31
SEMA4D-213ENST00000455551 GRHL1Q9NZI5 618 aa13.12□□□□□ -0.31
SEMA4D-213ENST00000455551 SLC12A6Q9UHW9 1150 aa13.12□□□□□ -0.31
SEMA4D-213ENST00000455551 HACL1Q9UJ83 578 aa13.12□□□□□ -0.31
SEMA4D-213ENST00000455551 GTF3C4Q9UKN8 822 aa13.12□□□□□ -0.31
SEMA4D-213ENST00000455551 CLDN3O15551 220 aa13.12□□□□□ -0.31
SEMA4D-213ENST00000455551 FGFR4P22455 802 aa13.12□□□□□ -0.31
SEMA4D-213ENST00000455551 PRKCEQ02156 737 aa13.12□□□□□ -0.31
SEMA4D-213ENST00000455551 SNX1Q13596 522 aa13.12□□□□□ -0.31
SEMA4D-213ENST00000455551 EMC10Q5UCC4 262 aa13.12□□□□□ -0.31
SEMA4D-213ENST00000455551 AEBP2Q6ZN18 517 aaPredicted RBP13.12□□□□□ -0.31
SEMA4D-213ENST00000455551 CCDC25Q86WR0 208 aa13.12□□□□□ -0.31
SEMA4D-213ENST00000455551 SLC13A5Q86YT5 568 aaPredicted RBP13.12□□□□□ -0.31
SEMA4D-213ENST00000455551 MICALL2Q8IY33 904 aa13.12□□□□□ -0.31
SEMA4D-213ENST00000455551 CD101Q93033 1021 aa13.12□□□□□ -0.31
SEMA4D-213ENST00000455551 TXLNGYQ9BZA5 131 aa13.12□□□□□ -0.31
SEMA4D-213ENST00000455551 POLR3FQ9H1D9 316 aaPredicted RBP13.12□□□□□ -0.31
SEMA4D-213ENST00000455551 EPB41L4BQ9H329 900 aa13.12□□□□□ -0.31
SEMA4D-213ENST00000455551 PNMA2Q9UL42 364 aa13.12□□□□□ -0.31
SEMA4D-213ENST00000455551 KIAA1217Q5T5P2 1943 aa13.12□□□□□ -0.31
SEMA4D-213ENST00000455551 ZNFX1Q9P2E3 1918 aaKnown RBP13.12□□□□□ -0.31
SEMA4D-213ENST00000455551 A0A087WUV0 522 aaPredicted RBP13.11□□□□□ -0.31
SEMA4D-213ENST00000455551 CYP1A2P05177 515 aa13.11□□□□□ -0.31
SEMA4D-213ENST00000455551 RARAP10276 462 aa13.11□□□□□ -0.31
SEMA4D-213ENST00000455551 SNRPFP62306 86 aaKnown RBP13.11□□□□□ -0.31
SEMA4D-213ENST00000455551 TTC31Q49AM3 519 aaPredicted RBP13.11□□□□□ -0.31
SEMA4D-213ENST00000455551 SPOPLQ6IQ16 392 aa13.11□□□□□ -0.31
SEMA4D-213ENST00000455551 DEFB132Q7Z7B7 95 aa13.11□□□□□ -0.31
SEMA4D-213ENST00000455551 GPD1LQ8N335 351 aa13.11□□□□□ -0.31
SEMA4D-213ENST00000455551 TMEM174Q8WUU8 243 aa13.11□□□□□ -0.31
SEMA4D-213ENST00000455551 C1orf54Q8WWF1 131 aa13.11□□□□□ -0.31
SEMA4D-213ENST00000455551 CPA5Q8WXQ8 436 aa13.11□□□□□ -0.31
SEMA4D-213ENST00000455551 KIFAP3Q92845 792 aa13.11□□□□□ -0.31
SEMA4D-213ENST00000455551 ATP6V0A1Q93050 837 aa13.11□□□□□ -0.31
SEMA4D-213ENST00000455551 RNF25Q96BH1 459 aaPredicted RBP13.11□□□□□ -0.31
SEMA4D-213ENST00000455551 TAOK3Q9H2K8 898 aa13.11□□□□□ -0.31
SEMA4D-213ENST00000455551 ANAPC7Q9UJX3 599 aa13.11□□□□□ -0.31
SEMA4D-213ENST00000455551 KCNA2P16389 499 aa13.11□□□□□ -0.31
SEMA4D-213ENST00000455551 CTNNA2P26232 953 aa13.11□□□□□ -0.31
SEMA4D-213ENST00000455551 WNT7BP56706 349 aa13.11□□□□□ -0.31
SEMA4D-213ENST00000455551 DENND2CQ68D51 928 aa13.11□□□□□ -0.31
SEMA4D-213ENST00000455551 B4GALNT4Q76KP1 1039 aa13.11□□□□□ -0.31
SEMA4D-213ENST00000455551 TAS1R3Q7RTX0 852 aa13.11□□□□□ -0.31
SEMA4D-213ENST00000455551 DHX37Q8IY37 1157 aaKnown RBP13.11□□□□□ -0.31
SEMA4D-213ENST00000455551 SLC17A8Q8NDX2 589 aa13.11□□□□□ -0.31
SEMA4D-213ENST00000455551 DDX1Q92499 740 aaKnown RBP13.11□□□□□ -0.31
SEMA4D-213ENST00000455551 MFSD14AQ96MC6 490 aa13.11□□□□□ -0.31
SEMA4D-213ENST00000455551 WRNIP1Q96S55 665 aa13.11□□□□□ -0.31
SEMA4D-213ENST00000455551 SEMA4AQ9H3S1 761 aa13.11□□□□□ -0.31
SEMA4D-213ENST00000455551 MAP3K20Q9NYL2 800 aaKnown RBP13.11□□□□□ -0.31
SEMA4D-213ENST00000455551 KIAA0754O94854 1291 aa13.11□□□□□ -0.31
SEMA4D-213ENST00000455551 SLCO1A2P46721 670 aa13.11□□□□□ -0.31
SEMA4D-213ENST00000455551 ACOT2P49753 483 aa13.11□□□□□ -0.31
SEMA4D-213ENST00000455551 BACE1P56817 501 aa13.11□□□□□ -0.31
SEMA4D-213ENST00000455551 SF3A3Q12874 501 aaKnown RBP eCLIP13.11□□□□□ -0.31
SEMA4D-213ENST00000455551 SLC29A2Q14542 456 aa13.11□□□□□ -0.31
SEMA4D-213ENST00000455551 RNF187Q5TA31 235 aaPredicted RBP13.11□□□□□ -0.31
SEMA4D-213ENST00000455551 AGBL2Q5U5Z8 902 aa13.11□□□□□ -0.31
SEMA4D-213ENST00000455551 JPH1Q9HDC5 661 aaPredicted RBP13.11□□□□□ -0.31
SEMA4D-213ENST00000455551 COQ4Q9Y3A0 265 aa13.11□□□□□ -0.31
SEMA4D-213ENST00000455551 PMM2O15305 246 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms