RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 MYADMQ96S97 322 aa17.75■□□□□ 0.43
GPC1-206ENST00000455111 PIEZO1Q92508 2521 aa17.75■□□□□ 0.43
GPC1-206ENST00000455111 CASTOR2A6NHX0 329 aa17.74■□□□□ 0.43
GPC1-206ENST00000455111 MEFVO15553 781 aaPredicted RBP17.74■□□□□ 0.43
GPC1-206ENST00000455111 PI15O43692 258 aa17.74■□□□□ 0.43
GPC1-206ENST00000455111 RECQL4O94761 1208 aa17.74■□□□□ 0.43
GPC1-206ENST00000455111 FXR2P51116 673 aaKnown RBP eCLIP17.74■□□□□ 0.43
GPC1-206ENST00000455111 CCDC149Q6ZUS6 474 aa17.74■□□□□ 0.43
GPC1-206ENST00000455111 TAS1R3Q7RTX0 852 aa17.74■□□□□ 0.43
GPC1-206ENST00000455111 KCNK18Q7Z418 384 aa17.74■□□□□ 0.43
GPC1-206ENST00000455111 TMEM87AQ8NBN3 555 aa17.74■□□□□ 0.43
GPC1-206ENST00000455111 ST13P5Q8NFI4 369 aaPredicted RBP17.74■□□□□ 0.43
GPC1-206ENST00000455111 MMTAG2Q9BU76 263 aaKnown RBP17.74■□□□□ 0.43
GPC1-206ENST00000455111 COLEC11Q9BWP8 271 aa17.74■□□□□ 0.43
GPC1-206ENST00000455111 TRIM6Q9C030 488 aaPredicted RBP17.74■□□□□ 0.43
GPC1-206ENST00000455111 KCNK12Q9HB15 430 aa17.74■□□□□ 0.43
GPC1-206ENST00000455111 WDR6Q9NNW5 1121 aaKnown RBP17.74■□□□□ 0.43
GPC1-206ENST00000455111 STK39Q9UEW8 545 aa17.74■□□□□ 0.43
GPC1-206ENST00000455111 PCDHB6Q9Y5E3 794 aa17.74■□□□□ 0.43
GPC1-206ENST00000455111 H0Y858 1186 aa17.73■□□□□ 0.43
GPC1-206ENST00000455111 ACKR2O00590 384 aa17.73■□□□□ 0.43
GPC1-206ENST00000455111 GLUD1P00367 558 aa17.73■□□□□ 0.43
GPC1-206ENST00000455111 PRKCBP05771 671 aa17.73■□□□□ 0.43
GPC1-206ENST00000455111 ADH1AP07327 375 aa17.73■□□□□ 0.43
GPC1-206ENST00000455111 U2AF2P26368 475 aaKnown RBP eCLIP17.73■□□□□ 0.43
GPC1-206ENST00000455111 TUSC3Q13454 348 aa17.73■□□□□ 0.43
GPC1-206ENST00000455111 HSP90AA2PQ14568 343 aaPredicted RBP17.73■□□□□ 0.43
GPC1-206ENST00000455111 PLCD3Q8N3E9 789 aa17.73■□□□□ 0.43
GPC1-206ENST00000455111 CEP120Q8N960 986 aa17.73■□□□□ 0.43
GPC1-206ENST00000455111 IGSF22Q8N9C0 903 aa17.73■□□□□ 0.43
GPC1-206ENST00000455111 LNX1Q8TBB1 728 aaPredicted RBP17.73■□□□□ 0.43
GPC1-206ENST00000455111 RIN2Q8WYP3 895 aaPredicted RBP17.73■□□□□ 0.43
GPC1-206ENST00000455111 CCDC43Q96MW1 224 aaKnown RBP17.73■□□□□ 0.43
GPC1-206ENST00000455111 CLSTN3Q9BQT9 956 aa17.73■□□□□ 0.43
GPC1-206ENST00000455111 RHOBTB2Q9BYZ6 727 aa17.73■□□□□ 0.43
GPC1-206ENST00000455111 NT5C3AQ9H0P0 336 aa17.73■□□□□ 0.43
GPC1-206ENST00000455111 BHMT2Q9H2M3 363 aa17.73■□□□□ 0.43
GPC1-206ENST00000455111 FNIP2Q9P278 1114 aa17.73■□□□□ 0.43
GPC1-206ENST00000455111 MYH15Q9Y2K3 1946 aa17.72■□□□□ 0.43
GPC1-206ENST00000455111 E9PMD0 336 aa17.72■□□□□ 0.43
GPC1-206ENST00000455111 CD2BP2O95400 341 aaKnown RBP17.72■□□□□ 0.43
GPC1-206ENST00000455111 CDC25AP30304 524 aa17.72■□□□□ 0.43
GPC1-206ENST00000455111 NAMPTP43490 491 aa17.72■□□□□ 0.43
GPC1-206ENST00000455111 MAPK7Q13164 816 aa17.72■□□□□ 0.43
GPC1-206ENST00000455111 ORC2Q13416 577 aaPredicted RBP17.72■□□□□ 0.43
GPC1-206ENST00000455111 PRPF4BQ13523 1007 aaKnown RBP17.72■□□□□ 0.43
GPC1-206ENST00000455111 RSPO2Q6UXX9 243 aaPredicted RBP17.72■□□□□ 0.43
GPC1-206ENST00000455111 C3orf58Q8NDZ4 430 aa17.72■□□□□ 0.43
GPC1-206ENST00000455111 DUSP12Q9UNI6 340 aa17.72■□□□□ 0.43
GPC1-206ENST00000455111 CLUHO75153 1309 aa17.72■□□□□ 0.43
GPC1-206ENST00000455111 ARHGEF35A5YM69 484 aa17.71■□□□□ 0.43
GPC1-206ENST00000455111 ABLIM1O14639 778 aa17.71■□□□□ 0.43
GPC1-206ENST00000455111 N4BP3O15049 544 aa17.71■□□□□ 0.43
GPC1-206ENST00000455111 GALR2O43603 387 aaPredicted RBP17.71■□□□□ 0.43
GPC1-206ENST00000455111 CCT6AP40227 531 aaKnown RBP17.71■□□□□ 0.43
GPC1-206ENST00000455111 SOX4Q06945 474 aaPredicted RBP17.71■□□□□ 0.43
GPC1-206ENST00000455111 NCBP1Q09161 790 aaKnown RBP17.71■□□□□ 0.43
GPC1-206ENST00000455111 SAFBQ15424 915 aaKnown RBP eCLIP17.71■□□□□ 0.43
GPC1-206ENST00000455111 USP41Q3LFD5 358 aa17.71■□□□□ 0.43
GPC1-206ENST00000455111 POTEHQ6S545 545 aa17.71■□□□□ 0.43
GPC1-206ENST00000455111 OTOP3Q7RTS5 596 aa17.71■□□□□ 0.43
GPC1-206ENST00000455111 ZBTB8OSQ8IWT0 167 aa17.71■□□□□ 0.43
GPC1-206ENST00000455111 TMEM130Q8N3G9 435 aa17.71■□□□□ 0.43
GPC1-206ENST00000455111 DDX19AQ9NUU7 478 aaKnown RBP17.71■□□□□ 0.43
GPC1-206ENST00000455111 KIAA1024Q9UPX6 916 aa17.71■□□□□ 0.43
GPC1-206ENST00000455111 SSX2IPQ9Y2D8 614 aa17.71■□□□□ 0.43
GPC1-206ENST00000455111 VPS13AQ96RL7 3174 aa17.71■□□□□ 0.42
GPC1-206ENST00000455111 MYH11P35749 1972 aa17.7■□□□□ 0.42
GPC1-206ENST00000455111 KRBA1A5PL33 1030 aa17.7■□□□□ 0.42
GPC1-206ENST00000455111 LIG1P18858 919 aa17.7■□□□□ 0.42
GPC1-206ENST00000455111 MUTP22033 750 aa17.7■□□□□ 0.42
GPC1-206ENST00000455111 NTHL1P78549 312 aa17.7■□□□□ 0.42
GPC1-206ENST00000455111 PTGDRQ13258 359 aa17.7■□□□□ 0.42
GPC1-206ENST00000455111 TDGQ13569 410 aa17.7■□□□□ 0.42
GPC1-206ENST00000455111 GLRA4Q5JXX5 417 aa17.7■□□□□ 0.42
GPC1-206ENST00000455111 GPR65Q8IYL9 337 aa17.7■□□□□ 0.42
GPC1-206ENST00000455111 SMG7Q92540 1137 aaKnown RBP17.7■□□□□ 0.42
GPC1-206ENST00000455111 PPP1R10Q96QC0 940 aaKnown RBP17.7■□□□□ 0.42
GPC1-206ENST00000455111 RUSC1Q9BVN2 902 aa17.7■□□□□ 0.42
GPC1-206ENST00000455111 C2orf40Q9H1Z8 148 aa17.7■□□□□ 0.42
GPC1-206ENST00000455111 GOLGA2P5Q9HBQ8 144 aa17.7■□□□□ 0.42
GPC1-206ENST00000455111 PTPRHQ9HD43 1115 aa17.7■□□□□ 0.42
GPC1-206ENST00000455111 EPS15L1Q9UBC2 864 aa17.7■□□□□ 0.42
GPC1-206ENST00000455111 LRWD1Q9UFC0 647 aa17.7■□□□□ 0.42
GPC1-206ENST00000455111 FBXW11Q9UKB1 542 aa17.7■□□□□ 0.42
GPC1-206ENST00000455111 GDAQ9Y2T3 454 aa17.7■□□□□ 0.42
GPC1-206ENST00000455111 TADA2AO75478 443 aa17.69■□□□□ 0.42
GPC1-206ENST00000455111 TRAPPC10P48553 1259 aa17.69■□□□□ 0.42
GPC1-206ENST00000455111 RBM25P49756 843 aaKnown RBP17.69■□□□□ 0.42
GPC1-206ENST00000455111 HMGN5P82970 282 aaKnown RBP17.69■□□□□ 0.42
GPC1-206ENST00000455111 MAPK6Q16659 721 aa17.69■□□□□ 0.42
GPC1-206ENST00000455111 FAM171A1Q5VUB5 890 aa17.69■□□□□ 0.42
GPC1-206ENST00000455111 ASTLQ6HA08 431 aaPredicted RBP17.69■□□□□ 0.42
GPC1-206ENST00000455111 HACE1Q8IYU2 909 aa17.69■□□□□ 0.42
GPC1-206ENST00000455111 ERMNQ8TAM6 284 aa17.69■□□□□ 0.42
GPC1-206ENST00000455111 DEPTORQ8TB45 409 aa17.69■□□□□ 0.42
GPC1-206ENST00000455111 LRRC15Q8TF66 581 aa17.69■□□□□ 0.42
GPC1-206ENST00000455111 HDAC7Q8WUI4 952 aa17.69■□□□□ 0.42
GPC1-206ENST00000455111 PIK3R5Q8WYR1 880 aa17.69■□□□□ 0.42
GPC1-206ENST00000455111 ACSF2Q96CM8 615 aaPredicted RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms