RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 SCNN1GP51170 649 aa8.9□□□□□ -0.98
NIF3L1-209ENST00000454952 AFF1P51825 1210 aaKnown RBP8.9□□□□□ -0.98
NIF3L1-209ENST00000454952 CYP4A11Q02928 519 aa8.9□□□□□ -0.98
NIF3L1-209ENST00000454952 MBTD1Q05BQ5 628 aa8.9□□□□□ -0.98
NIF3L1-209ENST00000454952 ELAVL2Q12926 359 aaKnown RBP8.9□□□□□ -0.98
NIF3L1-209ENST00000454952 STK3Q13188 491 aa8.9□□□□□ -0.98
NIF3L1-209ENST00000454952 CTTNQ14247 550 aaKnown RBP8.9□□□□□ -0.98
NIF3L1-209ENST00000454952 PHLDB3Q6NSJ2 640 aa8.9□□□□□ -0.98
NIF3L1-209ENST00000454952 FUT10Q6P4F1 479 aa8.9□□□□□ -0.98
NIF3L1-209ENST00000454952 SLC27A1Q6PCB7 646 aa8.9□□□□□ -0.98
NIF3L1-209ENST00000454952 SKAP1Q86WV1 359 aa8.9□□□□□ -0.98
NIF3L1-209ENST00000454952 GPIHBP1Q8IV16 184 aa8.9□□□□□ -0.98
NIF3L1-209ENST00000454952 SPNS2Q8IVW8 549 aa8.9□□□□□ -0.98
NIF3L1-209ENST00000454952 ADSSL1Q8N142 457 aa8.9□□□□□ -0.98
NIF3L1-209ENST00000454952 SLC44A3Q8N4M1 653 aa8.9□□□□□ -0.98
NIF3L1-209ENST00000454952 MCPH1Q8NEM0 835 aa8.9□□□□□ -0.98
NIF3L1-209ENST00000454952 DYDC2Q96IM9 177 aa8.9□□□□□ -0.98
NIF3L1-209ENST00000454952 PRIMPOLQ96LW4 560 aa8.9□□□□□ -0.98
NIF3L1-209ENST00000454952 AIFM3Q96NN9 605 aa8.9□□□□□ -0.98
NIF3L1-209ENST00000454952 EIF2AQ9BY44 585 aaKnown RBP8.9□□□□□ -0.98
NIF3L1-209ENST00000454952 PRKD2Q9BZL6 878 aa8.9□□□□□ -0.98
NIF3L1-209ENST00000454952 NT5C3AQ9H0P0 336 aa8.9□□□□□ -0.98
NIF3L1-209ENST00000454952 SLC2A4RGQ9NR83 387 aa8.9□□□□□ -0.98
NIF3L1-209ENST00000454952 RGL1Q9NZL6 768 aa8.9□□□□□ -0.98
NIF3L1-209ENST00000454952 WRAP73Q9P2S5 460 aaPredicted RBP8.9□□□□□ -0.98
NIF3L1-209ENST00000454952 ADAM28Q9UKQ2 775 aa8.9□□□□□ -0.98
NIF3L1-209ENST00000454952 GVINP1Q7Z2Y8 2422 aa8.9□□□□□ -0.99
NIF3L1-209ENST00000454952 A0A1B0GUA9 196 aa8.89□□□□□ -0.99
NIF3L1-209ENST00000454952 TGM5O43548 720 aa8.89□□□□□ -0.99
NIF3L1-209ENST00000454952 XYLBO75191 536 aa8.89□□□□□ -0.99
NIF3L1-209ENST00000454952 SLITRK3O94933 977 aa8.89□□□□□ -0.99
NIF3L1-209ENST00000454952 LMNAP02545 664 aaKnown RBP8.89□□□□□ -0.99
NIF3L1-209ENST00000454952 CFHP08603 1231 aa8.89□□□□□ -0.99
NIF3L1-209ENST00000454952 HNRNPA1P09651 372 aaKnown RBP eCLIP8.89□□□□□ -0.99
NIF3L1-209ENST00000454952 LAMP2P13473 410 aa8.89□□□□□ -0.99
NIF3L1-209ENST00000454952 ARF4P18085 180 aaPredicted RBP8.89□□□□□ -0.99
NIF3L1-209ENST00000454952 FSHRP23945 695 aa8.89□□□□□ -0.99
NIF3L1-209ENST00000454952 HOXA9P31269 272 aa8.89□□□□□ -0.99
NIF3L1-209ENST00000454952 ARL2P36404 184 aa8.89□□□□□ -0.99
NIF3L1-209ENST00000454952 ID4P47928 161 aa8.89□□□□□ -0.99
NIF3L1-209ENST00000454952 SPIRE1Q08AE8 756 aa8.89□□□□□ -0.99
NIF3L1-209ENST00000454952 SCRN1Q12765 414 aa8.89□□□□□ -0.99
NIF3L1-209ENST00000454952 CAPSQ13938 189 aa8.89□□□□□ -0.99
NIF3L1-209ENST00000454952 HSP90AA2PQ14568 343 aaPredicted RBP8.89□□□□□ -0.99
NIF3L1-209ENST00000454952 CALCRLQ16602 461 aa8.89□□□□□ -0.99
NIF3L1-209ENST00000454952 LIN9Q5TKA1 542 aa8.89□□□□□ -0.99
NIF3L1-209ENST00000454952 MTSS1LQ765P7 747 aa8.89□□□□□ -0.99
NIF3L1-209ENST00000454952 RTL10Q7L3V2 364 aa8.89□□□□□ -0.99
NIF3L1-209ENST00000454952 TAS1R1Q7RTX1 841 aa8.89□□□□□ -0.99
NIF3L1-209ENST00000454952 APBB1IPQ7Z5R6 666 aaPredicted RBP8.89□□□□□ -0.99
NIF3L1-209ENST00000454952 PALB2Q86YC2 1186 aa8.89□□□□□ -0.99
NIF3L1-209ENST00000454952 ZBTB8OSQ8IWT0 167 aa8.89□□□□□ -0.99
NIF3L1-209ENST00000454952 KCNG4Q8TDN1 519 aa8.89□□□□□ -0.99
NIF3L1-209ENST00000454952 PTCD2Q8WV60 388 aaKnown RBP8.89□□□□□ -0.99
NIF3L1-209ENST00000454952 RIN2Q8WYP3 895 aaPredicted RBP8.89□□□□□ -0.99
NIF3L1-209ENST00000454952 CPB2Q96IY4 423 aa8.89□□□□□ -0.99
NIF3L1-209ENST00000454952 ZFP42Q96MM3 310 aa8.89□□□□□ -0.99
NIF3L1-209ENST00000454952 HSD17B14Q9BPX1 270 aa8.89□□□□□ -0.99
NIF3L1-209ENST00000454952 EIF2AK1Q9BQI3 630 aaKnown RBP8.89□□□□□ -0.99
NIF3L1-209ENST00000454952 APOL6Q9BWW8 343 aa8.89□□□□□ -0.99
NIF3L1-209ENST00000454952 C2orf40Q9H1Z8 148 aa8.89□□□□□ -0.99
NIF3L1-209ENST00000454952 NXF3Q9H4D5 531 aaKnown RBP8.89□□□□□ -0.99
NIF3L1-209ENST00000454952 TBC1D17Q9HA65 648 aa8.89□□□□□ -0.99
NIF3L1-209ENST00000454952 ARHGEF3Q9NR81 526 aa8.89□□□□□ -0.99
NIF3L1-209ENST00000454952 PRMT7Q9NVM4 692 aaPredicted RBP8.89□□□□□ -0.99
NIF3L1-209ENST00000454952 ORC3Q9UBD5 711 aaPredicted RBP8.89□□□□□ -0.99
NIF3L1-209ENST00000454952 SIT1Q9Y3P8 196 aa8.89□□□□□ -0.99
NIF3L1-209ENST00000454952 MIA3Q5JRA6 1907 aa8.89□□□□□ -0.99
NIF3L1-209ENST00000454952 FANCMQ8IYD8 2048 aa8.88□□□□□ -0.99
NIF3L1-209ENST00000454952 USP34Q70CQ2 3546 aa8.88□□□□□ -0.99
NIF3L1-209ENST00000454952 ANHXE9PGG2 379 aa8.88□□□□□ -0.99
NIF3L1-209ENST00000454952 N4BP3O15049 544 aa8.88□□□□□ -0.99
NIF3L1-209ENST00000454952 PI15O43692 258 aa8.88□□□□□ -0.99
NIF3L1-209ENST00000454952 NEMFO60524 1076 aa8.88□□□□□ -0.99
NIF3L1-209ENST00000454952 PFKFB2O60825 505 aa8.88□□□□□ -0.99
NIF3L1-209ENST00000454952 EIF5BO60841 1220 aaKnown RBP8.88□□□□□ -0.99
NIF3L1-209ENST00000454952 RFPL2O75678 378 aa8.88□□□□□ -0.99
NIF3L1-209ENST00000454952 NPTXRO95502 500 aa8.88□□□□□ -0.99
NIF3L1-209ENST00000454952 POU2F2P09086 479 aa8.88□□□□□ -0.99
NIF3L1-209ENST00000454952 RARRES1P49788 294 aa8.88□□□□□ -0.99
NIF3L1-209ENST00000454952 PFKPQ01813 784 aa8.88□□□□□ -0.99
NIF3L1-209ENST00000454952 TUSC3Q13454 348 aa8.88□□□□□ -0.99
NIF3L1-209ENST00000454952 TRIM29Q14134 588 aa8.88□□□□□ -0.99
NIF3L1-209ENST00000454952 AMHR2Q16671 573 aa8.88□□□□□ -0.99
NIF3L1-209ENST00000454952 FAM187BQ17R55 369 aa8.88□□□□□ -0.99
NIF3L1-209ENST00000454952 TMEM132AQ24JP5 1023 aa8.88□□□□□ -0.99
NIF3L1-209ENST00000454952 LILRA6Q6PI73 481 aa8.88□□□□□ -0.99
NIF3L1-209ENST00000454952 DCLRE1AQ6PJP8 1040 aa8.88□□□□□ -0.99
NIF3L1-209ENST00000454952 GET4Q7L5D6 327 aaPredicted RBP8.88□□□□□ -0.99
NIF3L1-209ENST00000454952 ZNF707Q96C28 371 aaPredicted RBP8.88□□□□□ -0.99
NIF3L1-209ENST00000454952 MYADMQ96S97 322 aa8.88□□□□□ -0.99
NIF3L1-209ENST00000454952 ADPGKQ9BRR6 497 aa8.88□□□□□ -0.99
NIF3L1-209ENST00000454952 TTPALQ9BTX7 342 aa8.88□□□□□ -0.99
NIF3L1-209ENST00000454952 POLR3FQ9H1D9 316 aaPredicted RBP8.88□□□□□ -0.99
NIF3L1-209ENST00000454952 TTC12Q9H892 705 aaPredicted RBP8.88□□□□□ -0.99
NIF3L1-209ENST00000454952 XPNPEP1Q9NQW7 623 aa8.88□□□□□ -0.99
NIF3L1-209ENST00000454952 PARP2Q9UGN5 583 aa8.88□□□□□ -0.99
NIF3L1-209ENST00000454952 CA14Q9ULX7 337 aa8.88□□□□□ -0.99
NIF3L1-209ENST00000454952 HES2Q9Y543 173 aa8.88□□□□□ -0.99
NIF3L1-209ENST00000454952 MYH15Q9Y2K3 1946 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms