RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 XIRP2A4UGR9 3374 aa15.53■□□□□ 0.08
HDAC4-205ENST00000454542 UNC80Q8N2C7 3258 aa15.53■□□□□ 0.08
HDAC4-205ENST00000454542 A0A1B0GVL5 298 aa15.52■□□□□ 0.08
HDAC4-205ENST00000454542 MEFVO15553 781 aaPredicted RBP15.52■□□□□ 0.08
HDAC4-205ENST00000454542 SLFN14P0C7P3 912 aa15.52■□□□□ 0.08
HDAC4-205ENST00000454542 IRS1P35568 1242 aa15.52■□□□□ 0.08
HDAC4-205ENST00000454542 ANP32AP39687 249 aaKnown RBP15.52■□□□□ 0.08
HDAC4-205ENST00000454542 CASP5P51878 434 aa15.52■□□□□ 0.08
HDAC4-205ENST00000454542 AMPD3Q01432 767 aa15.52■□□□□ 0.08
HDAC4-205ENST00000454542 RNASELQ05823 741 aaKnown RBP15.52■□□□□ 0.08
HDAC4-205ENST00000454542 ALCAMQ13740 583 aa15.52■□□□□ 0.08
HDAC4-205ENST00000454542 RNF168Q8IYW5 571 aaPredicted RBP15.52■□□□□ 0.08
HDAC4-205ENST00000454542 IGSF21Q96ID5 467 aa15.52■□□□□ 0.08
HDAC4-205ENST00000454542 SNX27Q96L92 541 aa15.52■□□□□ 0.08
HDAC4-205ENST00000454542 CXCL16Q9H2A7 254 aa15.52■□□□□ 0.08
HDAC4-205ENST00000454542 GOLPH3LQ9H4A5 285 aa15.52■□□□□ 0.08
HDAC4-205ENST00000454542 ZHX3Q9H4I2 956 aa15.52■□□□□ 0.08
HDAC4-205ENST00000454542 TLR9Q9NR96 1032 aa15.52■□□□□ 0.08
HDAC4-205ENST00000454542 PANK4Q9NVE7 773 aa15.52■□□□□ 0.08
HDAC4-205ENST00000454542 PARP2Q9UGN5 583 aa15.52■□□□□ 0.08
HDAC4-205ENST00000454542 USP25Q9UHP3 1055 aa15.52■□□□□ 0.08
HDAC4-205ENST00000454542 STYXL1Q9Y6J8 313 aa15.52■□□□□ 0.08
HDAC4-205ENST00000454542 TRIP11Q15643 1979 aa15.52■□□□□ 0.07
HDAC4-205ENST00000454542 ANK1P16157 1881 aa15.51■□□□□ 0.07
HDAC4-205ENST00000454542 HNRNPDLO14979 420 aaKnown RBP15.51■□□□□ 0.07
HDAC4-205ENST00000454542 ZC2HC1CQ53FD0 456 aaPredicted RBP15.51■□□□□ 0.07
HDAC4-205ENST00000454542 L1TD1Q5T7N2 865 aaKnown RBP15.51■□□□□ 0.07
HDAC4-205ENST00000454542 ALKAL1Q6UXT8 129 aa15.51■□□□□ 0.07
HDAC4-205ENST00000454542 UNC13DQ70J99 1090 aa15.51■□□□□ 0.07
HDAC4-205ENST00000454542 CCDC65Q8IXS2 484 aa15.51■□□□□ 0.07
HDAC4-205ENST00000454542 MICALL1Q8N3F8 863 aa15.51■□□□□ 0.07
HDAC4-205ENST00000454542 PPP1R10Q96QC0 940 aaKnown RBP15.51■□□□□ 0.07
HDAC4-205ENST00000454542 RPS6KC1Q96S38 1066 aa15.51■□□□□ 0.07
HDAC4-205ENST00000454542 VN1R3Q9BXE9 311 aa15.51■□□□□ 0.07
HDAC4-205ENST00000454542 KLK14Q9P0G3 267 aa15.51■□□□□ 0.07
HDAC4-205ENST00000454542 CNTN3Q9P232 1028 aa15.51■□□□□ 0.07
HDAC4-205ENST00000454542 ANKFY1Q9P2R3 1169 aa15.51■□□□□ 0.07
HDAC4-205ENST00000454542 SERTAD1Q9UHV2 236 aa15.51■□□□□ 0.07
HDAC4-205ENST00000454542 NT5C1B-RDH14C9J2C7 533 aa15.5■□□□□ 0.07
HDAC4-205ENST00000454542 CLDN3O15551 220 aa15.5■□□□□ 0.07
HDAC4-205ENST00000454542 MYBP10242 640 aa15.5■□□□□ 0.07
HDAC4-205ENST00000454542 IDEP14735 1019 aa15.5■□□□□ 0.07
HDAC4-205ENST00000454542 ALDH7A1P49419 539 aaKnown RBP15.5■□□□□ 0.07
HDAC4-205ENST00000454542 LIG4P49917 911 aa15.5■□□□□ 0.07
HDAC4-205ENST00000454542 NDUFA8P51970 172 aa15.5■□□□□ 0.07
HDAC4-205ENST00000454542 ERVFC1P60507 584 aa15.5■□□□□ 0.07
HDAC4-205ENST00000454542 ASIC1P78348 528 aa15.5■□□□□ 0.07
HDAC4-205ENST00000454542 TUSC3Q13454 348 aa15.5■□□□□ 0.07
HDAC4-205ENST00000454542 HERC4Q5GLZ8 1057 aaPredicted RBP15.5■□□□□ 0.07
HDAC4-205ENST00000454542 TCEAL5Q5H9L2 206 aa15.5■□□□□ 0.07
HDAC4-205ENST00000454542 PDE12Q6L8Q7 609 aaKnown RBP15.5■□□□□ 0.07
HDAC4-205ENST00000454542 ZBTB33Q86T24 672 aa15.5■□□□□ 0.07
HDAC4-205ENST00000454542 FSIP1Q8NA03 581 aa15.5■□□□□ 0.07
HDAC4-205ENST00000454542 TMEM169Q96HH4 297 aa15.5■□□□□ 0.07
HDAC4-205ENST00000454542 CCDC94Q9BW85 323 aaPredicted RBP15.5■□□□□ 0.07
HDAC4-205ENST00000454542 GBP3Q9H0R5 595 aa15.5■□□□□ 0.07
HDAC4-205ENST00000454542 ZBP1Q9H171 429 aa15.5■□□□□ 0.07
HDAC4-205ENST00000454542 MRPL44Q9H9J2 332 aaKnown RBP15.5■□□□□ 0.07
HDAC4-205ENST00000454542 GDAQ9Y2T3 454 aa15.5■□□□□ 0.07
HDAC4-205ENST00000454542 UBE4BO95155 1302 aa15.49■□□□□ 0.07
HDAC4-205ENST00000454542 A0A0B4J269 797 aa15.49■□□□□ 0.07
HDAC4-205ENST00000454542 NRP1O14786 923 aa15.49■□□□□ 0.07
HDAC4-205ENST00000454542 EIF3DO15371 548 aaKnown RBP eCLIP15.49■□□□□ 0.07
HDAC4-205ENST00000454542 KLRC4O43908 158 aa15.49■□□□□ 0.07
HDAC4-205ENST00000454542 GCNT3O95395 438 aa15.49■□□□□ 0.07
HDAC4-205ENST00000454542 MYL1P05976 194 aa15.49■□□□□ 0.07
HDAC4-205ENST00000454542 ADRB2P07550 413 aa15.49■□□□□ 0.07
HDAC4-205ENST00000454542 KCNE1P15382 129 aa15.49■□□□□ 0.07
HDAC4-205ENST00000454542 SYKP43405 635 aa15.49■□□□□ 0.07
HDAC4-205ENST00000454542 CUL4BQ13620 913 aa15.49■□□□□ 0.07
HDAC4-205ENST00000454542 CCDC85BQ15834 202 aaPredicted RBP15.49■□□□□ 0.07
HDAC4-205ENST00000454542 EPM2AIP1Q7L775 607 aaPredicted RBP15.49■□□□□ 0.07
HDAC4-205ENST00000454542 ADGRD2Q7Z7M1 963 aa15.49■□□□□ 0.07
HDAC4-205ENST00000454542 DDX53Q86TM3 631 aaKnown RBP15.49■□□□□ 0.07
HDAC4-205ENST00000454542 CEP57L1Q8IYX8 460 aa15.49■□□□□ 0.07
HDAC4-205ENST00000454542 BICD1Q96G01 975 aa15.49■□□□□ 0.07
HDAC4-205ENST00000454542 FAM193BQ96PV7 902 aaPredicted RBP15.49■□□□□ 0.07
HDAC4-205ENST00000454542 PRDM6Q9NQX0 595 aa15.49■□□□□ 0.07
HDAC4-205ENST00000454542 TOPORSQ9NS56 1045 aaPredicted RBP15.49■□□□□ 0.07
HDAC4-205ENST00000454542 THEGQ9P2T0 379 aa15.49■□□□□ 0.07
HDAC4-205ENST00000454542 STK39Q9UEW8 545 aa15.49■□□□□ 0.07
HDAC4-205ENST00000454542 PCDHGC5Q9Y5F6 944 aa15.49■□□□□ 0.07
HDAC4-205ENST00000454542 MYO7AQ13402 2215 aa15.49■□□□□ 0.07
HDAC4-205ENST00000454542 BRWD1Q9NSI6 2320 aa15.48■□□□□ 0.07
HDAC4-205ENST00000454542 PVALEFA0A1B0GWK0 134 aa15.48■□□□□ 0.07
HDAC4-205ENST00000454542 TISP43B9A030 160 aa15.48■□□□□ 0.07
HDAC4-205ENST00000454542 ANKRD63C9JTQ0 380 aa15.48■□□□□ 0.07
HDAC4-205ENST00000454542 OGTO15294 1046 aa15.48■□□□□ 0.07
HDAC4-205ENST00000454542 THP07101 528 aa15.48■□□□□ 0.07
HDAC4-205ENST00000454542 HARSP12081 509 aaKnown RBP15.48■□□□□ 0.07
HDAC4-205ENST00000454542 CASP1P29466 404 aa15.48■□□□□ 0.07
HDAC4-205ENST00000454542 KRT17Q04695 432 aa15.48■□□□□ 0.07
HDAC4-205ENST00000454542 KCNA1Q09470 495 aa15.48■□□□□ 0.07
HDAC4-205ENST00000454542 HYAL1Q12794 435 aa15.48■□□□□ 0.07
HDAC4-205ENST00000454542 KYAT1Q16773 422 aa15.48■□□□□ 0.07
HDAC4-205ENST00000454542 CTC1Q2NKJ3 1217 aa15.48■□□□□ 0.07
HDAC4-205ENST00000454542 FAM26FQ5R3K3 315 aa15.48■□□□□ 0.07
HDAC4-205ENST00000454542 GRAMD1CQ8IYS0 662 aa15.48■□□□□ 0.07
HDAC4-205ENST00000454542 GLIS3Q8NEA6 775 aa15.48■□□□□ 0.07
HDAC4-205ENST00000454542 PPM1EQ8WY54 764 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms