RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 ARSEP51690 589 aa12.75□□□□□ -0.37
SEC16A-207ENST00000453963 LCA5Q86VQ0 697 aa12.75□□□□□ -0.37
SEC16A-207ENST00000453963 FAM129AQ9BZQ8 928 aa12.75□□□□□ -0.37
SEC16A-207ENST00000453963 ATP6V0A4Q9HBG4 840 aa12.75□□□□□ -0.37
SEC16A-207ENST00000453963 DONSONQ9NYP3 566 aa12.75□□□□□ -0.37
SEC16A-207ENST00000453963 MAGED2Q9UNF1 606 aaPredicted RBP12.75□□□□□ -0.37
SEC16A-207ENST00000453963 UBE4BO95155 1302 aa12.75□□□□□ -0.37
SEC16A-207ENST00000453963 SLC16A4O15374 487 aa12.75□□□□□ -0.37
SEC16A-207ENST00000453963 SRGAP2CP0DJJ0 459 aa12.75□□□□□ -0.37
SEC16A-207ENST00000453963 ZNF18P17022 549 aa12.75□□□□□ -0.37
SEC16A-207ENST00000453963 MED21Q13503 144 aa12.75□□□□□ -0.37
SEC16A-207ENST00000453963 CYB5D1Q6P9G0 228 aa12.75□□□□□ -0.37
SEC16A-207ENST00000453963 C16orf87Q6PH81 154 aa12.75□□□□□ -0.37
SEC16A-207ENST00000453963 LONP2Q86WA8 852 aa12.75□□□□□ -0.37
SEC16A-207ENST00000453963 ERP27Q96DN0 273 aa12.75□□□□□ -0.37
SEC16A-207ENST00000453963 SMARCAL1Q9NZC9 954 aa12.75□□□□□ -0.37
SEC16A-207ENST00000453963 SUCLA2Q9P2R7 463 aaPredicted RBP12.75□□□□□ -0.37
SEC16A-207ENST00000453963 SLC9A2Q9UBY0 812 aa12.75□□□□□ -0.37
SEC16A-207ENST00000453963 CROCC2H7BZ55 1655 aa12.75□□□□□ -0.37
SEC16A-207ENST00000453963 NVLO15381 856 aaKnown RBP12.75□□□□□ -0.37
SEC16A-207ENST00000453963 PAMP19021 973 aa12.75□□□□□ -0.37
SEC16A-207ENST00000453963 SCP2P22307 547 aa12.75□□□□□ -0.37
SEC16A-207ENST00000453963 KRT76Q01546 638 aa12.75□□□□□ -0.37
SEC16A-207ENST00000453963 ZNF394Q53GI3 561 aa12.75□□□□□ -0.37
SEC16A-207ENST00000453963 PAPD7Q5XG87 772 aaKnown RBP12.75□□□□□ -0.37
SEC16A-207ENST00000453963 MYCBPAPQ8TBZ2 947 aa12.75□□□□□ -0.37
SEC16A-207ENST00000453963 SCG3Q8WXD2 468 aaKnown RBP12.75□□□□□ -0.37
SEC16A-207ENST00000453963 DNAJC9Q8WXX5 260 aa12.75□□□□□ -0.37
SEC16A-207ENST00000453963 HPS3Q969F9 1004 aa12.75□□□□□ -0.37
SEC16A-207ENST00000453963 ZMAT2Q96NC0 199 aaKnown RBP12.75□□□□□ -0.37
SEC16A-207ENST00000453963 DNAJC7Q99615 494 aa12.75□□□□□ -0.37
SEC16A-207ENST00000453963 MOV10L1Q9BXT6 1211 aaKnown RBP12.75□□□□□ -0.37
SEC16A-207ENST00000453963 POLD4Q9HCU8 107 aa12.75□□□□□ -0.37
SEC16A-207ENST00000453963 APEX2Q9UBZ4 518 aa12.75□□□□□ -0.37
SEC16A-207ENST00000453963 FEM1BQ9UK73 627 aa12.75□□□□□ -0.37
SEC16A-207ENST00000453963 SPHKAPQ2M3C7 1700 aa12.75□□□□□ -0.37
SEC16A-207ENST00000453963 RNF103-CHMP3A0A140T963 221 aa12.74□□□□□ -0.37
SEC16A-207ENST00000453963 CLDN3O15551 220 aa12.74□□□□□ -0.37
SEC16A-207ENST00000453963 AP5Z1O43299 807 aa12.74□□□□□ -0.37
SEC16A-207ENST00000453963 TMEM253P0C7T8 217 aa12.74□□□□□ -0.37
SEC16A-207ENST00000453963 MTMR1Q13613 665 aa12.74□□□□□ -0.37
SEC16A-207ENST00000453963 NLRP4Q96MN2 994 aa12.74□□□□□ -0.37
SEC16A-207ENST00000453963 RBM15Q96T37 977 aaKnown RBP eCLIP12.74□□□□□ -0.378e-6■■■■□ 19.3
SEC16A-207ENST00000453963 NOD2Q9HC29 1040 aa12.74□□□□□ -0.37
SEC16A-207ENST00000453963 HPSEQ9Y251 543 aa12.74□□□□□ -0.37
SEC16A-207ENST00000453963 SLC4A7Q9Y6M7 1214 aa12.74□□□□□ -0.37
SEC16A-207ENST00000453963 DENND3A2RUS2 1198 aa12.74□□□□□ -0.37
SEC16A-207ENST00000453963 SPDYE2BA6NHP3 402 aa12.74□□□□□ -0.37
SEC16A-207ENST00000453963 F8W8V4 182 aa12.74□□□□□ -0.37
SEC16A-207ENST00000453963 SPDYE6P0CI01 402 aa12.74□□□□□ -0.37
SEC16A-207ENST00000453963 KLRC1P26715 233 aa12.74□□□□□ -0.37
SEC16A-207ENST00000453963 QARSP47897 775 aaKnown RBP12.74□□□□□ -0.37
SEC16A-207ENST00000453963 ERVK-24P63145 666 aa12.74□□□□□ -0.37
SEC16A-207ENST00000453963 PTPAQ15257 358 aa12.74□□□□□ -0.37
SEC16A-207ENST00000453963 VPS72Q15906 364 aa12.74□□□□□ -0.37
SEC16A-207ENST00000453963 LONRF1Q17RB8 773 aa12.74□□□□□ -0.37
SEC16A-207ENST00000453963 KIF19Q2TAC6 998 aa12.74□□□□□ -0.37
SEC16A-207ENST00000453963 QRICH1Q2TAL8 776 aa12.74□□□□□ -0.37
SEC16A-207ENST00000453963 HP1BP3Q5SSJ5 553 aaPredicted RBP12.74□□□□□ -0.37
SEC16A-207ENST00000453963 RIBC1Q8N443 379 aaPredicted RBP12.74□□□□□ -0.37
SEC16A-207ENST00000453963 FAM213AQ9BRX8 229 aa12.74□□□□□ -0.37
SEC16A-207ENST00000453963 ING2Q9H160 280 aa12.74□□□□□ -0.37
SEC16A-207ENST00000453963 PARVAQ9NVD7 372 aa12.74□□□□□ -0.37
SEC16A-207ENST00000453963 WARS2Q9UGM6 360 aaKnown RBP12.74□□□□□ -0.37
SEC16A-207ENST00000453963 DBR1Q9UK59 544 aaKnown RBP12.74□□□□□ -0.37
SEC16A-207ENST00000453963 HEY1Q9Y5J3 304 aa12.74□□□□□ -0.37
SEC16A-207ENST00000453963 TMEM120BA0PK00 339 aa12.74□□□□□ -0.37
SEC16A-207ENST00000453963 MARK3P27448 753 aa12.74□□□□□ -0.37
SEC16A-207ENST00000453963 RANBP1P43487 201 aa12.74□□□□□ -0.37
SEC16A-207ENST00000453963 STXBP2Q15833 593 aa12.74□□□□□ -0.37
SEC16A-207ENST00000453963 C2orf69Q8N8R5 385 aa12.74□□□□□ -0.37
SEC16A-207ENST00000453963 EIF2AK1Q9BQI3 630 aaKnown RBP12.74□□□□□ -0.37
SEC16A-207ENST00000453963 CYP4F11Q9HBI6 524 aa12.74□□□□□ -0.37
SEC16A-207ENST00000453963 KLHL8Q9P2G9 620 aaPredicted RBP12.74□□□□□ -0.37
SEC16A-207ENST00000453963 SUGT1Q9Y2Z0 365 aa12.74□□□□□ -0.37
SEC16A-207ENST00000453963 CCDC195A0A1B0GUA6 201 aa12.74□□□□□ -0.37
SEC16A-207ENST00000453963 LRRIQ3A6PVS8 624 aaPredicted RBP12.74□□□□□ -0.37
SEC16A-207ENST00000453963 HSD17B3P37058 310 aa12.74□□□□□ -0.37
SEC16A-207ENST00000453963 STAT3P40763 770 aa12.74□□□□□ -0.37
SEC16A-207ENST00000453963 ROR1Q01973 937 aa12.74□□□□□ -0.37
SEC16A-207ENST00000453963 SNRNP48Q6IEG0 339 aaKnown RBP12.74□□□□□ -0.37
SEC16A-207ENST00000453963 APLFQ8IW19 511 aaPredicted RBP12.74□□□□□ -0.37
SEC16A-207ENST00000453963 PRPF38AQ8NAV1 312 aaKnown RBP12.74□□□□□ -0.37
SEC16A-207ENST00000453963 NSUN6Q8TEA1 469 aaKnown RBP12.74□□□□□ -0.37
SEC16A-207ENST00000453963 SLC13A1Q9BZW2 595 aa12.74□□□□□ -0.37
SEC16A-207ENST00000453963 RAVER2Q9HCJ3 691 aaKnown RBP12.74□□□□□ -0.37
SEC16A-207ENST00000453963 UBN1Q9NPG3 1134 aa12.74□□□□□ -0.37
SEC16A-207ENST00000453963 RNF146Q9NTX7 359 aa12.74□□□□□ -0.37
SEC16A-207ENST00000453963 HPS5Q9UPZ3 1129 aa12.74□□□□□ -0.37
SEC16A-207ENST00000453963 MYMKA6NI61 221 aa12.73□□□□□ -0.37
SEC16A-207ENST00000453963 ZBBXA8MT70 800 aa12.73□□□□□ -0.37
SEC16A-207ENST00000453963 PAPOLAP51003 745 aaKnown RBP12.73□□□□□ -0.37
SEC16A-207ENST00000453963 BCAR1P56945 870 aa12.73□□□□□ -0.37
SEC16A-207ENST00000453963 CUL3Q13618 768 aa12.73□□□□□ -0.37
SEC16A-207ENST00000453963 SF3B3Q15393 1217 aaKnown RBP12.73□□□□□ -0.37
SEC16A-207ENST00000453963 ADGRF4Q8IZF3 695 aa12.73□□□□□ -0.37
SEC16A-207ENST00000453963 TSSK1BQ9BXA7 367 aa12.73□□□□□ -0.37
SEC16A-207ENST00000453963 HERC5Q9UII4 1024 aaKnown RBP12.73□□□□□ -0.37
SEC16A-207ENST00000453963 L3MBTL1Q9Y468 752 aa12.73□□□□□ -0.37
SEC16A-207ENST00000453963 ENO4A6NNW6 628 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms