RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 CEP120Q8N960 986 aa6.52□□□□□ -1.37
SDC4P-201ENST00000453285 SLC43A3Q8NBI5 491 aa6.52□□□□□ -1.37
SDC4P-201ENST00000453285 EHBP1Q8NDI1 1231 aa6.52□□□□□ -1.37
SDC4P-201ENST00000453285 CCDC112Q8NEF3 446 aa6.52□□□□□ -1.37
SDC4P-201ENST00000453285 NEK11Q8NG66 645 aa6.52□□□□□ -1.37
SDC4P-201ENST00000453285 OR8K1Q8NGG5 319 aa6.52□□□□□ -1.37
SDC4P-201ENST00000453285 TMEM40Q8WWA1 233 aa6.52□□□□□ -1.37
SDC4P-201ENST00000453285 NLRP7Q8WX94 980 aa6.52□□□□□ -1.37
SDC4P-201ENST00000453285 SEMA4DQ92854 862 aa6.52□□□□□ -1.37
SDC4P-201ENST00000453285 CCDC127Q96BQ5 260 aa6.52□□□□□ -1.37
SDC4P-201ENST00000453285 IQCDQ96DY2 449 aa6.52□□□□□ -1.37
SDC4P-201ENST00000453285 CPB2Q96IY4 423 aa6.52□□□□□ -1.37
SDC4P-201ENST00000453285 PCMTD1Q96MG8 357 aaPredicted RBP6.52□□□□□ -1.37
SDC4P-201ENST00000453285 OSMRQ99650 979 aa6.52□□□□□ -1.37
SDC4P-201ENST00000453285 CHP1Q99653 195 aa6.52□□□□□ -1.37
SDC4P-201ENST00000453285 BAG1Q99933 345 aaPredicted RBP6.52□□□□□ -1.37
SDC4P-201ENST00000453285 BEGAINQ9BUH8 593 aa6.52□□□□□ -1.37
SDC4P-201ENST00000453285 MSTO1Q9BUK6 570 aa6.52□□□□□ -1.37
SDC4P-201ENST00000453285 NAA15Q9BXJ9 866 aaKnown RBP6.52□□□□□ -1.37
SDC4P-201ENST00000453285 GCOM2Q9BZD3 368 aaPredicted RBP6.52□□□□□ -1.37
SDC4P-201ENST00000453285 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.52□□□□□ -1.37
SDC4P-201ENST00000453285 UNC93B1Q9H1C4 597 aa6.52□□□□□ -1.37
SDC4P-201ENST00000453285 PDZD7Q9H5P4 517 aa6.52□□□□□ -1.37
SDC4P-201ENST00000453285 PDE11AQ9HCR9 933 aa6.52□□□□□ -1.37
SDC4P-201ENST00000453285 TOPORSQ9NS56 1045 aaPredicted RBP6.52□□□□□ -1.37
SDC4P-201ENST00000453285 FAM207AQ9NSI2 230 aaPredicted RBP6.52□□□□□ -1.37
SDC4P-201ENST00000453285 CEP72Q9P209 647 aa6.52□□□□□ -1.37
SDC4P-201ENST00000453285 ANKFY1Q9P2R3 1169 aa6.52□□□□□ -1.37
SDC4P-201ENST00000453285 FBXL5Q9UKA1 691 aa6.52□□□□□ -1.37
SDC4P-201ENST00000453285 AJAP1Q9UKB5 411 aaPredicted RBP6.52□□□□□ -1.37
SDC4P-201ENST00000453285 CPSF3Q9UKF6 684 aaKnown RBP6.52□□□□□ -1.37
SDC4P-201ENST00000453285 LUC7L2Q9Y383 392 aaKnown RBP6.52□□□□□ -1.37
SDC4P-201ENST00000453285 PTPRJQ12913 1337 aa6.51□□□□□ -1.37
SDC4P-201ENST00000453285 TANC1Q9C0D5 1861 aa6.51□□□□□ -1.37
SDC4P-201ENST00000453285 ZNF500O60304 480 aaPredicted RBP6.51□□□□□ -1.37
SDC4P-201ENST00000453285 N4BP1O75113 896 aaKnown RBP6.51□□□□□ -1.37
SDC4P-201ENST00000453285 CHRNA1P02708 482 aa6.51□□□□□ -1.37
SDC4P-201ENST00000453285 MYCNP04198 464 aaPredicted RBP6.51□□□□□ -1.37
SDC4P-201ENST00000453285 TPM1P09493 284 aa6.51□□□□□ -1.37
SDC4P-201ENST00000453285 MCF2P10911 925 aa6.51□□□□□ -1.37
SDC4P-201ENST00000453285 UCHL3P15374 230 aa6.51□□□□□ -1.37
SDC4P-201ENST00000453285 EIF4BP23588 611 aaKnown RBP6.51□□□□□ -1.37
SDC4P-201ENST00000453285 MATR3P43243 847 aaKnown RBP eCLIP6.51□□□□□ -1.37
SDC4P-201ENST00000453285 KCNJ6P48051 423 aa6.51□□□□□ -1.37
SDC4P-201ENST00000453285 POLR2FP61218 127 aaKnown RBP6.51□□□□□ -1.37
SDC4P-201ENST00000453285 MRPS6P82932 125 aaKnown RBP6.51□□□□□ -1.37
SDC4P-201ENST00000453285 MYL7Q01449 175 aa6.51□□□□□ -1.37
SDC4P-201ENST00000453285 POU5F1Q01860 360 aaKnown RBP6.51□□□□□ -1.37
SDC4P-201ENST00000453285 PTPN11Q06124 597 aaPredicted RBP6.51□□□□□ -1.37
SDC4P-201ENST00000453285 MTF1Q14872 753 aa6.51□□□□□ -1.37
SDC4P-201ENST00000453285 NOLC1Q14978 699 aaKnown RBP eCLIP6.51□□□□□ -1.37
SDC4P-201ENST00000453285 PCBP1Q15365 356 aaKnown RBP eCLIP6.51□□□□□ -1.37
SDC4P-201ENST00000453285 MTFR1Q15390 333 aa6.51□□□□□ -1.37
SDC4P-201ENST00000453285 ENOX2Q16206 610 aaKnown RBP6.51□□□□□ -1.37
SDC4P-201ENST00000453285 TRIM71Q2Q1W2 868 aaKnown RBP6.51□□□□□ -1.37
SDC4P-201ENST00000453285 ZNF568Q3ZCX4 644 aa6.51□□□□□ -1.37
SDC4P-201ENST00000453285 ZACNQ401N2 412 aa6.51□□□□□ -1.37
SDC4P-201ENST00000453285 SCARA3Q6AZY7 606 aa6.51□□□□□ -1.37
SDC4P-201ENST00000453285 IQCEQ6IPM2 695 aa6.51□□□□□ -1.37
SDC4P-201ENST00000453285 PHLDB3Q6NSJ2 640 aa6.51□□□□□ -1.37
SDC4P-201ENST00000453285 PDXDC1Q6P996 788 aa6.51□□□□□ -1.37
SDC4P-201ENST00000453285 GJB7Q6PEY0 223 aa6.51□□□□□ -1.37
SDC4P-201ENST00000453285 TRIM65Q6PJ69 517 aa6.51□□□□□ -1.37
SDC4P-201ENST00000453285 RAD9BQ6WBX8 426 aa6.51□□□□□ -1.37
SDC4P-201ENST00000453285 SV2AQ7L0J3 742 aa6.51□□□□□ -1.37
SDC4P-201ENST00000453285 TMEM192Q8IY95 271 aa6.51□□□□□ -1.37
SDC4P-201ENST00000453285 C17orf53Q8N3J3 647 aaPredicted RBP6.51□□□□□ -1.37
SDC4P-201ENST00000453285 ARRDC4Q8NCT1 418 aa6.51□□□□□ -1.37
SDC4P-201ENST00000453285 DHX38Q92620 1227 aaKnown RBP6.51□□□□□ -1.37
SDC4P-201ENST00000453285 FAM84AQ96KN4 292 aa6.51□□□□□ -1.37
SDC4P-201ENST00000453285 TCHPQ9BT92 498 aa6.51□□□□□ -1.37
SDC4P-201ENST00000453285 CELF4Q9BZC1 486 aaKnown RBP6.51□□□□□ -1.37
SDC4P-201ENST00000453285 OSBPL7Q9BZF2 842 aa6.51□□□□□ -1.37
SDC4P-201ENST00000453285 INTS2Q9H0H0 1204 aaKnown RBP6.51□□□□□ -1.37
SDC4P-201ENST00000453285 TMEM8AQ9HCN3 771 aa6.51□□□□□ -1.37
SDC4P-201ENST00000453285 NLRC4Q9NPP4 1024 aa6.51□□□□□ -1.37
SDC4P-201ENST00000453285 RRAGDQ9NQL2 400 aaPredicted RBP6.51□□□□□ -1.37
SDC4P-201ENST00000453285 PAK6Q9NQU5 681 aaPredicted RBP6.51□□□□□ -1.37
SDC4P-201ENST00000453285 KCND1Q9NSA2 647 aa6.51□□□□□ -1.37
SDC4P-201ENST00000453285 RBAKQ9NYW8 714 aaPredicted RBP6.51□□□□□ -1.37
SDC4P-201ENST00000453285 GCNT4Q9P109 453 aa6.51□□□□□ -1.37
SDC4P-201ENST00000453285 PLAGL2Q9UPG8 496 aa6.51□□□□□ -1.37
SDC4P-201ENST00000453285 PHF24Q9UPV7 400 aa6.51□□□□□ -1.37
SDC4P-201ENST00000453285 FHOD1Q9Y613 1164 aa6.51□□□□□ -1.37
SDC4P-201ENST00000453285 MICAL3Q7RTP6 2002 aa6.5□□□□□ -1.37
SDC4P-201ENST00000453285 A0A1W2PQ45 241 aaPredicted RBP6.5□□□□□ -1.37
SDC4P-201ENST00000453285 A0A1W2PQY0 241 aa6.5□□□□□ -1.37
SDC4P-201ENST00000453285 SOWAHDA6NJG2 315 aa6.5□□□□□ -1.37
SDC4P-201ENST00000453285 LRRC53A6NM62 1247 aa6.5□□□□□ -1.37
SDC4P-201ENST00000453285 ARHGAP6O43182 974 aa6.5□□□□□ -1.37
SDC4P-201ENST00000453285 B4GALT4O60513 344 aa6.5□□□□□ -1.37
SDC4P-201ENST00000453285 ERLIN2O94905 339 aa6.5□□□□□ -1.37
SDC4P-201ENST00000453285 VNN1O95497 513 aa6.5□□□□□ -1.37
SDC4P-201ENST00000453285 CLTAP09496 248 aa6.5□□□□□ -1.37
SDC4P-201ENST00000453285 STAG3L1P0CL83 205 aa6.5□□□□□ -1.37
SDC4P-201ENST00000453285 DLATP10515 647 aaKnown RBP6.5□□□□□ -1.37
SDC4P-201ENST00000453285 HSPA8P11142 646 aaKnown RBP6.5□□□□□ -1.37
SDC4P-201ENST00000453285 HARSP12081 509 aaKnown RBP6.5□□□□□ -1.37
SDC4P-201ENST00000453285 CCL5P13501 91 aa6.5□□□□□ -1.37
SDC4P-201ENST00000453285 AXLP30530 894 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms