RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 RFPL2O75678 378 aa12.06□□□□□ -0.48
USP1-204ENST00000452143 NPTXRO95502 500 aa12.06□□□□□ -0.48
USP1-204ENST00000452143 NPR3P17342 541 aa12.06□□□□□ -0.48
USP1-204ENST00000452143 AKAP5P24588 427 aa12.06□□□□□ -0.48
USP1-204ENST00000452143 GBP2P32456 591 aaPredicted RBP12.06□□□□□ -0.48
USP1-204ENST00000452143 TXKP42681 527 aa12.06□□□□□ -0.48
USP1-204ENST00000452143 TRIM29Q14134 588 aa12.06□□□□□ -0.48
USP1-204ENST00000452143 ME3Q16798 604 aa12.06□□□□□ -0.48
USP1-204ENST00000452143 FAM187BQ17R55 369 aa12.06□□□□□ -0.48
USP1-204ENST00000452143 ZBTB8OSQ8IWT0 167 aa12.06□□□□□ -0.48
USP1-204ENST00000452143 CCDC105Q8IYK2 499 aa12.06□□□□□ -0.48
USP1-204ENST00000452143 SIX5Q8N196 739 aa12.06□□□□□ -0.48
USP1-204ENST00000452143 NSUN7Q8NE18 718 aaKnown RBP12.06□□□□□ -0.48
USP1-204ENST00000452143 ZNF707Q96C28 371 aaPredicted RBP12.06□□□□□ -0.48
USP1-204ENST00000452143 GPR62Q9BZJ7 368 aa12.06□□□□□ -0.48
USP1-204ENST00000452143 TUFT1Q9NNX1 390 aa12.06□□□□□ -0.48
USP1-204ENST00000452143 MIOSQ9NXC5 875 aa12.06□□□□□ -0.48
USP1-204ENST00000452143 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.06□□□□□ -0.48
USP1-204ENST00000452143 EP300Q09472 2414 aaPredicted RBP12.06□□□□□ -0.48
USP1-204ENST00000452143 MYH15Q9Y2K3 1946 aa12.05□□□□□ -0.48
USP1-204ENST00000452143 FRYLO94915 3013 aa12.05□□□□□ -0.48
USP1-204ENST00000452143 LRRIQ4A6NIV6 560 aa12.05□□□□□ -0.48
USP1-204ENST00000452143 SRFP11831 508 aa12.05□□□□□ -0.48
USP1-204ENST00000452143 ORC2Q13416 577 aaPredicted RBP12.05□□□□□ -0.48
USP1-204ENST00000452143 TUSC3Q13454 348 aa12.05□□□□□ -0.48
USP1-204ENST00000452143 HSP90AA2PQ14568 343 aaPredicted RBP12.05□□□□□ -0.48
USP1-204ENST00000452143 LILRA6Q6PI73 481 aa12.05□□□□□ -0.48
USP1-204ENST00000452143 ASCL5Q7RTU5 278 aa12.05□□□□□ -0.48
USP1-204ENST00000452143 PIGOQ8TEQ8 1089 aa12.05□□□□□ -0.48
USP1-204ENST00000452143 NKD2Q969F2 451 aaPredicted RBP12.05□□□□□ -0.48
USP1-204ENST00000452143 SNX27Q96L92 541 aa12.05□□□□□ -0.48
USP1-204ENST00000452143 PRKD2Q9BZL6 878 aa12.05□□□□□ -0.48
USP1-204ENST00000452143 NT5C3AQ9H0P0 336 aa12.05□□□□□ -0.48
USP1-204ENST00000452143 C2orf40Q9H1Z8 148 aa12.05□□□□□ -0.48
USP1-204ENST00000452143 PIDD1Q9HB75 910 aa12.05□□□□□ -0.48
USP1-204ENST00000452143 PARP2Q9UGN5 583 aa12.05□□□□□ -0.48
USP1-204ENST00000452143 ZFP37Q9Y6Q3 630 aaPredicted RBP12.05□□□□□ -0.48
USP1-204ENST00000452143 MIA3Q5JRA6 1907 aa12.04□□□□□ -0.48
USP1-204ENST00000452143 WNT7AO00755 349 aa12.04□□□□□ -0.48
USP1-204ENST00000452143 N4BP3O15049 544 aa12.04□□□□□ -0.48
USP1-204ENST00000452143 NARSO43776 548 aaKnown RBP12.04□□□□□ -0.48
USP1-204ENST00000452143 EIF5BO60841 1220 aaKnown RBP12.04□□□□□ -0.48
USP1-204ENST00000452143 DTNBO60941 627 aa12.04□□□□□ -0.48
USP1-204ENST00000452143 TADA2AO75478 443 aa12.04□□□□□ -0.48
USP1-204ENST00000452143 ZMYND10O75800 440 aa12.04□□□□□ -0.48
USP1-204ENST00000452143 LARGE1O95461 756 aa12.04□□□□□ -0.48
USP1-204ENST00000452143 SPATA31C1P0DKV0 1188 aa12.04□□□□□ -0.48
USP1-204ENST00000452143 TIE1P35590 1138 aa12.04□□□□□ -0.48
USP1-204ENST00000452143 PDXDC1Q6P996 788 aa12.04□□□□□ -0.48
USP1-204ENST00000452143 CATSPER3Q86XQ3 398 aa12.04□□□□□ -0.48
USP1-204ENST00000452143 PALB2Q86YC2 1186 aa12.04□□□□□ -0.48
USP1-204ENST00000452143 NECAB1Q8N987 351 aa12.04□□□□□ -0.48
USP1-204ENST00000452143 DTWD2Q8NBA8 298 aa12.04□□□□□ -0.48
USP1-204ENST00000452143 ERMNQ8TAM6 284 aa12.04□□□□□ -0.48
USP1-204ENST00000452143 RIN2Q8WYP3 895 aaPredicted RBP12.04□□□□□ -0.48
USP1-204ENST00000452143 PIK3R5Q8WYR1 880 aa12.04□□□□□ -0.48
USP1-204ENST00000452143 B3GALT6Q96L58 329 aa12.04□□□□□ -0.48
USP1-204ENST00000452143 NACC1Q96RE7 527 aa12.04□□□□□ -0.48
USP1-204ENST00000452143 MYADMQ96S97 322 aa12.04□□□□□ -0.48
USP1-204ENST00000452143 ADPGKQ9BRR6 497 aa12.04□□□□□ -0.48
USP1-204ENST00000452143 POLR3CQ9BUI4 534 aaPredicted RBP12.04□□□□□ -0.48
USP1-204ENST00000452143 FZD8Q9H461 694 aa12.04□□□□□ -0.48
USP1-204ENST00000452143 GPRC5CQ9NQ84 441 aa12.04□□□□□ -0.48
USP1-204ENST00000452143 FBXW11Q9UKB1 542 aa12.04□□□□□ -0.48
USP1-204ENST00000452143 FANCMQ8IYD8 2048 aa12.04□□□□□ -0.48
USP1-204ENST00000452143 DCHS1Q96JQ0 3298 aa12.04□□□□□ -0.48
USP1-204ENST00000452143 TRIP11Q15643 1979 aa12.03□□□□□ -0.48
USP1-204ENST00000452143 ANHXE9PGG2 379 aa12.03□□□□□ -0.48
USP1-204ENST00000452143 JAK2O60674 1132 aa12.03□□□□□ -0.48
USP1-204ENST00000452143 KIF4AO95239 1232 aa12.03□□□□□ -0.48
USP1-204ENST00000452143 SEC24BO95487 1268 aa12.03□□□□□ -0.48
USP1-204ENST00000452143 CFHP08603 1231 aa12.03□□□□□ -0.48
USP1-204ENST00000452143 HNRNPA1P09651 372 aaKnown RBP eCLIP12.03□□□□□ -0.48
USP1-204ENST00000452143 SPATA31D3P0C874 917 aa12.03□□□□□ -0.48
USP1-204ENST00000452143 LAMP2P13473 410 aa12.03□□□□□ -0.48
USP1-204ENST00000452143 ATP2B1P20020 1258 aa12.03□□□□□ -0.48
USP1-204ENST00000452143 MUTP22033 750 aa12.03□□□□□ -0.48
USP1-204ENST00000452143 RFX1P22670 979 aa12.03□□□□□ -0.48
USP1-204ENST00000452143 HOXA9P31269 272 aa12.03□□□□□ -0.48
USP1-204ENST00000452143 NAMPTP43490 491 aa12.03□□□□□ -0.48
USP1-204ENST00000452143 FOXK2Q01167 660 aa12.03□□□□□ -0.48
USP1-204ENST00000452143 ELAVL2Q12926 359 aaKnown RBP12.03□□□□□ -0.48
USP1-204ENST00000452143 PRPF4BQ13523 1007 aaKnown RBP12.03□□□□□ -0.48
USP1-204ENST00000452143 PPP2R5AQ15172 486 aa12.03□□□□□ -0.48
USP1-204ENST00000452143 ANGPT1Q15389 498 aa12.03□□□□□ -0.48
USP1-204ENST00000452143 SAFBQ15424 915 aaKnown RBP eCLIP12.03□□□□□ -0.48
USP1-204ENST00000452143 MAPK6Q16659 721 aa12.03□□□□□ -0.48
USP1-204ENST00000452143 RTP2Q5QGT7 225 aa12.03□□□□□ -0.48
USP1-204ENST00000452143 LIN9Q5TKA1 542 aa12.03□□□□□ -0.48
USP1-204ENST00000452143 HAUS3Q68CZ6 603 aa12.03□□□□□ -0.48
USP1-204ENST00000452143 SPATA31D4Q6ZUB0 917 aa12.03□□□□□ -0.48
USP1-204ENST00000452143 GET4Q7L5D6 327 aaPredicted RBP12.03□□□□□ -0.48
USP1-204ENST00000452143 FRMD5Q7Z6J6 570 aa12.03□□□□□ -0.48
USP1-204ENST00000452143 CDR2LQ86X02 465 aaPredicted RBP12.03□□□□□ -0.48
USP1-204ENST00000452143 SLC44A3Q8N4M1 653 aa12.03□□□□□ -0.48
USP1-204ENST00000452143 TTPALQ9BTX7 342 aa12.03□□□□□ -0.48
USP1-204ENST00000452143 PDZD7Q9H5P4 517 aa12.03□□□□□ -0.48
USP1-204ENST00000452143 KLK14Q9P0G3 267 aa12.03□□□□□ -0.48
USP1-204ENST00000452143 DOCK6Q96HP0 2047 aa12.03□□□□□ -0.48
USP1-204ENST00000452143 DMXL1Q9Y485 3027 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms