RNA–Protein interactions for RNA: ENST00000451343.4

TNXB-203, Transcript of tenascin XB, humanhuman

TSL 1 (best) BASIC

Gene TNXB, Length 3,125 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-203ENST00000451343 SAAL1Q96ER3 474 aa12.35□□□□□ -0.43
TNXB-203ENST00000451343 PWWP2AQ96N64 755 aa12.35□□□□□ -0.43
TNXB-203ENST00000451343 CAMKK2Q96RR4 588 aa12.35□□□□□ -0.43
TNXB-203ENST00000451343 KIFC3Q9BVG8 833 aa12.35□□□□□ -0.43
TNXB-203ENST00000451343 NUP85Q9BW27 656 aa12.35□□□□□ -0.43
TNXB-203ENST00000451343 TRIM7Q9C029 511 aa12.35□□□□□ -0.43
TNXB-203ENST00000451343 INTS9Q9NV88 658 aaKnown RBP12.35□□□□□ -0.43
TNXB-203ENST00000451343 TPX2Q9ULW0 747 aaKnown RBP12.35□□□□□ -0.43
TNXB-203ENST00000451343 PCDHA3Q9Y5H8 950 aa12.35□□□□□ -0.43
TNXB-203ENST00000451343 NRXN2Q9P2S2 1712 aa12.35□□□□□ -0.43
TNXB-203ENST00000451343 CLDN3O15551 220 aa12.35□□□□□ -0.43
TNXB-203ENST00000451343 CHRNA3P32297 505 aa12.35□□□□□ -0.43
TNXB-203ENST00000451343 MMP13P45452 471 aa12.35□□□□□ -0.43
TNXB-203ENST00000451343 VPS41P49754 854 aa12.35□□□□□ -0.43
TNXB-203ENST00000451343 FOXD4Q12950 439 aaPredicted RBP12.35□□□□□ -0.43
TNXB-203ENST00000451343 FAM133BQ5BKY9 247 aaKnown RBP12.35□□□□□ -0.43
TNXB-203ENST00000451343 LLGL2Q6P1M3 1020 aa12.35□□□□□ -0.43
TNXB-203ENST00000451343 CCDC197Q8NCU1 140 aa12.35□□□□□ -0.43
TNXB-203ENST00000451343 ATG4AQ8WYN0 398 aa12.35□□□□□ -0.43
TNXB-203ENST00000451343 SEMA4DQ92854 862 aa12.35□□□□□ -0.43
TNXB-203ENST00000451343 FAM118BQ9BPY3 351 aa12.35□□□□□ -0.43
TNXB-203ENST00000451343 CNOT10Q9H9A5 744 aaKnown RBP12.35□□□□□ -0.43
TNXB-203ENST00000451343 ACTR5Q9H9F9 607 aaPredicted RBP12.35□□□□□ -0.43
TNXB-203ENST00000451343 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.35□□□□□ -0.43
TNXB-203ENST00000451343 HSPBP1Q9NZL4 362 aa12.35□□□□□ -0.43
TNXB-203ENST00000451343 CTNNAL1Q9UBT7 734 aa12.35□□□□□ -0.43
TNXB-203ENST00000451343 SEL1LQ9UBV2 794 aa12.35□□□□□ -0.43
TNXB-203ENST00000451343 DIS3Q9Y2L1 958 aaKnown RBP12.35□□□□□ -0.43
TNXB-203ENST00000451343 ANKRD31Q8N7Z5 1873 aa12.35□□□□□ -0.43
TNXB-203ENST00000451343 CCDC169A6NNP5 214 aa12.35□□□□□ -0.43
TNXB-203ENST00000451343 HGSO14964 777 aaPredicted RBP12.35□□□□□ -0.43
TNXB-203ENST00000451343 SLC16A4O15374 487 aa12.35□□□□□ -0.43
TNXB-203ENST00000451343 ITGB5P18084 799 aa12.35□□□□□ -0.43
TNXB-203ENST00000451343 C11orf63Q6NUN7 778 aa12.35□□□□□ -0.43
TNXB-203ENST00000451343 PODNQ7Z5L7 613 aa12.35□□□□□ -0.43
TNXB-203ENST00000451343 CBWD2Q8IUF1 395 aa12.35□□□□□ -0.43
TNXB-203ENST00000451343 PARP9Q8IXQ6 854 aa12.35□□□□□ -0.43
TNXB-203ENST00000451343 SDR16C5Q8N3Y7 309 aa12.35□□□□□ -0.43
TNXB-203ENST00000451343 ZNF564Q8TBZ8 553 aaPredicted RBP12.35□□□□□ -0.43
TNXB-203ENST00000451343 ZNF653Q96CK0 615 aa12.35□□□□□ -0.43
TNXB-203ENST00000451343 TEKT3Q9BXF9 490 aa12.35□□□□□ -0.43
TNXB-203ENST00000451343 WDR11Q9BZH6 1224 aa12.35□□□□□ -0.43
TNXB-203ENST00000451343 TMEM117Q9H0C3 514 aa12.35□□□□□ -0.43
TNXB-203ENST00000451343 ODF2LQ9ULJ1 636 aa12.35□□□□□ -0.43
TNXB-203ENST00000451343 RIPK2O43353 540 aa12.34□□□□□ -0.43
TNXB-203ENST00000451343 CTNNA2P26232 953 aa12.34□□□□□ -0.43
TNXB-203ENST00000451343 COILP38432 576 aaPredicted RBP12.34□□□□□ -0.43
TNXB-203ENST00000451343 MXI1P50539 228 aa12.34□□□□□ -0.43
TNXB-203ENST00000451343 IRX1P78414 480 aaPredicted RBP12.34□□□□□ -0.43
TNXB-203ENST00000451343 ADCY1Q08828 1119 aa12.34□□□□□ -0.43
TNXB-203ENST00000451343 ZNF280DQ6N043 979 aa12.34□□□□□ -0.43
TNXB-203ENST00000451343 MIER3Q7Z3K6 550 aa12.34□□□□□ -0.43
TNXB-203ENST00000451343 TAX1BP1Q86VP1 789 aa12.34□□□□□ -0.43
TNXB-203ENST00000451343 SLC13A5Q86YT5 568 aaPredicted RBP12.34□□□□□ -0.43
TNXB-203ENST00000451343 PGM2Q96G03 612 aa12.34□□□□□ -0.43
TNXB-203ENST00000451343 FAXDC2Q96IV6 333 aa12.34□□□□□ -0.43
TNXB-203ENST00000451343 STRA6Q9BX79 667 aa12.34□□□□□ -0.43
TNXB-203ENST00000451343 ZNF277Q9NRM2 450 aaPredicted RBP12.34□□□□□ -0.43
TNXB-203ENST00000451343 COL20A1Q9P218 1284 aa12.34□□□□□ -0.43
TNXB-203ENST00000451343 NOCTQ9UK39 431 aaKnown RBP12.34□□□□□ -0.43
TNXB-203ENST00000451343 CHUKO15111 745 aa12.34□□□□□ -0.43
TNXB-203ENST00000451343 AUHQ13825 339 aaKnown RBP12.34□□□□□ -0.43
TNXB-203ENST00000451343 PLCB4Q15147 1175 aa12.34□□□□□ -0.43
TNXB-203ENST00000451343 AGBL1Q96MI9 1066 aa12.34□□□□□ -0.43
TNXB-203ENST00000451343 HERPUD2Q9BSE4 406 aa12.34□□□□□ -0.43
TNXB-203ENST00000451343 ABCF3Q9NUQ8 709 aa12.34□□□□□ -0.43
TNXB-203ENST00000451343 MTRF1LQ9UGC7 380 aaKnown RBP12.34□□□□□ -0.43
TNXB-203ENST00000451343 CCT8L1PA6NM43 557 aa12.33□□□□□ -0.44
TNXB-203ENST00000451343 MIF4GDA9UHW6 222 aaKnown RBP12.33□□□□□ -0.44
TNXB-203ENST00000451343 RASGRF2O14827 1237 aa12.33□□□□□ -0.44
TNXB-203ENST00000451343 RTN2O75298 545 aa12.33□□□□□ -0.44
TNXB-203ENST00000451343 OATP04181 439 aa12.33□□□□□ -0.44
TNXB-203ENST00000451343 CHKAP35790 457 aa12.33□□□□□ -0.44
TNXB-203ENST00000451343 PEX3P56589 373 aa12.33□□□□□ -0.44
TNXB-203ENST00000451343 FMO1Q01740 532 aa12.33□□□□□ -0.44
TNXB-203ENST00000451343 SPP2Q13103 211 aa12.33□□□□□ -0.44
TNXB-203ENST00000451343 DRP2Q13474 957 aa12.33□□□□□ -0.44
TNXB-203ENST00000451343 PPP1R7Q15435 360 aa12.33□□□□□ -0.44
TNXB-203ENST00000451343 SIX1Q15475 284 aaPredicted RBP12.33□□□□□ -0.44
TNXB-203ENST00000451343 STRIP1Q5VSL9 837 aa12.33□□□□□ -0.44
TNXB-203ENST00000451343 HIBCHQ6NVY1 386 aaPredicted RBP12.33□□□□□ -0.44
TNXB-203ENST00000451343 INTS8Q75QN2 995 aaKnown RBP12.33□□□□□ -0.44
TNXB-203ENST00000451343 C3orf20Q8ND61 904 aa12.33□□□□□ -0.44
TNXB-203ENST00000451343 PCYOX1Q9UHG3 505 aa12.33□□□□□ -0.44
TNXB-203ENST00000451343 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.33□□□□□ -0.44
TNXB-203ENST00000451343 PFASO15067 1338 aa12.33□□□□□ -0.44
TNXB-203ENST00000451343 UBE4BO95155 1302 aa12.33□□□□□ -0.44
TNXB-203ENST00000451343 VIL1P09327 827 aaKnown RBP12.33□□□□□ -0.44
TNXB-203ENST00000451343 RDXP35241 583 aaKnown RBP12.33□□□□□ -0.44
TNXB-203ENST00000451343 SOX10P56693 466 aa12.33□□□□□ -0.44
TNXB-203ENST00000451343 TNIP1Q15025 636 aa12.33□□□□□ -0.44
TNXB-203ENST00000451343 SNCBQ16143 134 aa12.33□□□□□ -0.44
TNXB-203ENST00000451343 RNF207Q6ZRF8 634 aa12.33□□□□□ -0.44
TNXB-203ENST00000451343 MIGA2Q7L4E1 593 aa12.33□□□□□ -0.44
TNXB-203ENST00000451343 LDHDQ86WU2 507 aa12.33□□□□□ -0.44
TNXB-203ENST00000451343 ANKRD42Q8N9B4 389 aa12.33□□□□□ -0.44
TNXB-203ENST00000451343 CD101Q93033 1021 aa12.33□□□□□ -0.44
TNXB-203ENST00000451343 HOMER2Q9NSB8 354 aa12.33□□□□□ -0.44
TNXB-203ENST00000451343 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.33□□□□□ -0.44
TNXB-203ENST00000451343 ZHX2Q9Y6X8 837 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms