RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 FXR2P51116 673 aaKnown RBP eCLIP29.95■■■□□ 2.39
USP42-204ENST00000451154 RIN2Q8WYP3 895 aaPredicted RBP29.95■■■□□ 2.39
USP42-204ENST00000451154 KIFC3Q9BVG8 833 aa29.95■■■□□ 2.39
USP42-204ENST00000451154 CCDC113Q9H0I3 377 aa29.95■■■□□ 2.39
USP42-204ENST00000451154 LRWD1Q9UFC0 647 aa29.95■■■□□ 2.39
USP42-204ENST00000451154 NOL7Q9UMY1 257 aaKnown RBP29.95■■■□□ 2.39
USP42-204ENST00000451154 KIAA1024Q9UPX6 916 aa29.95■■■□□ 2.39
USP42-204ENST00000451154 MTCL1Q9Y4B5 1905 aaKnown RBP29.94■■■□□ 2.38
USP42-204ENST00000451154 ZMYM2Q9UBW7 1377 aa29.94■■■□□ 2.38
USP42-204ENST00000451154 ACKR2O00590 384 aa29.94■■■□□ 2.38
USP42-204ENST00000451154 EDN1P05305 212 aa29.94■■■□□ 2.38
USP42-204ENST00000451154 RPL17P18621 184 aaKnown RBP29.94■■■□□ 2.38
USP42-204ENST00000451154 MUTP22033 750 aa29.94■■■□□ 2.38
USP42-204ENST00000451154 NAMPTP43490 491 aa29.94■■■□□ 2.38
USP42-204ENST00000451154 HAUS3Q68CZ6 603 aa29.94■■■□□ 2.38
USP42-204ENST00000451154 BHMT2Q9H2M3 363 aa29.94■■■□□ 2.38
USP42-204ENST00000451154 DPP7Q9UHL4 492 aa29.94■■■□□ 2.38
USP42-204ENST00000451154 CASTOR2A6NHX0 329 aa29.93■■■□□ 2.38
USP42-204ENST00000451154 TOB1P50616 345 aaPredicted RBP29.93■■■□□ 2.38
USP42-204ENST00000451154 TUSC3Q13454 348 aa29.93■■■□□ 2.38
USP42-204ENST00000451154 HSP90AA2PQ14568 343 aaPredicted RBP29.93■■■□□ 2.38
USP42-204ENST00000451154 EEF1DP3Q658K8 133 aa29.93■■■□□ 2.38
USP42-204ENST00000451154 HASPINQ8TF76 798 aa29.93■■■□□ 2.38
USP42-204ENST00000451154 PTGESO14684 152 aa29.92■■■□□ 2.38
USP42-204ENST00000451154 TGM5O43548 720 aa29.92■■■□□ 2.38
USP42-204ENST00000451154 RECQL4O94761 1208 aa29.92■■■□□ 2.38
USP42-204ENST00000451154 U2AF2P26368 475 aaKnown RBP eCLIP29.92■■■□□ 2.383e-6■■■□□ 15.4
USP42-204ENST00000451154 PTGDRQ13258 359 aa29.92■■■□□ 2.38
USP42-204ENST00000451154 PDIA5Q14554 519 aa29.92■■■□□ 2.38
USP42-204ENST00000451154 PPP2R5AQ15172 486 aa29.92■■■□□ 2.38
USP42-204ENST00000451154 ELMSAN1Q6PJG2 1045 aa29.92■■■□□ 2.38
USP42-204ENST00000451154 IFT74Q96LB3 600 aa29.92■■■□□ 2.38
USP42-204ENST00000451154 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP29.92■■■□□ 2.38
USP42-204ENST00000451154 FNIP2Q9P278 1114 aa29.92■■■□□ 2.38
USP42-204ENST00000451154 PCDHB6Q9Y5E3 794 aa29.92■■■□□ 2.38
USP42-204ENST00000451154 N4BP1O75113 896 aaKnown RBP29.91■■■□□ 2.38
USP42-204ENST00000451154 THP07101 528 aa29.91■■■□□ 2.38
USP42-204ENST00000451154 PRSS55Q6UWB4 352 aaPredicted RBP29.91■■■□□ 2.38
USP42-204ENST00000451154 SMG7Q92540 1137 aaKnown RBP29.91■■■□□ 2.38
USP42-204ENST00000451154 ADPGKQ9BRR6 497 aa29.91■■■□□ 2.38
USP42-204ENST00000451154 KCNK12Q9HB15 430 aa29.91■■■□□ 2.38
USP42-204ENST00000451154 WDR6Q9NNW5 1121 aaKnown RBP29.91■■■□□ 2.38
USP42-204ENST00000451154 DDX19AQ9NUU7 478 aaKnown RBP29.91■■■□□ 2.38
USP42-204ENST00000451154 GDAQ9Y2T3 454 aa29.91■■■□□ 2.38
USP42-204ENST00000451154 TDGQ13569 410 aa29.9■■■□□ 2.38
USP42-204ENST00000451154 C8orf34Q49A92 452 aa29.9■■■□□ 2.38
USP42-204ENST00000451154 RTP2Q5QGT7 225 aa29.9■■■□□ 2.38
USP42-204ENST00000451154 NT5DC1Q5TFE4 455 aa29.9■■■□□ 2.38
USP42-204ENST00000451154 LILRA6Q6PI73 481 aa29.9■■■□□ 2.38
USP42-204ENST00000451154 GPR65Q8IYL9 337 aa29.9■■■□□ 2.38
USP42-204ENST00000451154 HDAC7Q8WUI4 952 aa29.9■■■□□ 2.38
USP42-204ENST00000451154 ZNF707Q96C28 371 aaPredicted RBP29.9■■■□□ 2.38
USP42-204ENST00000451154 NT5C3AQ9H0P0 336 aa29.9■■■□□ 2.38
USP42-204ENST00000451154 PLEKHA4Q9H4M7 779 aa29.9■■■□□ 2.38
USP42-204ENST00000451154 USP34Q70CQ2 3546 aa29.89■■■□□ 2.38
USP42-204ENST00000451154 KIF4AO95239 1232 aa29.89■■■□□ 2.38
USP42-204ENST00000451154 CYP26C1Q6V0L0 522 aa29.89■■■□□ 2.38
USP42-204ENST00000451154 SNX29Q8TEQ0 813 aa29.89■■■□□ 2.38
USP42-204ENST00000451154 KIFAP3Q92845 792 aa29.89■■■□□ 2.38
USP42-204ENST00000451154 FAM86C1Q9NVL1 165 aa29.89■■■□□ 2.38
USP42-204ENST00000451154 TRIP11Q15643 1979 aa29.89■■■□□ 2.38
USP42-204ENST00000451154 DOCK6Q96HP0 2047 aa29.89■■■□□ 2.38
USP42-204ENST00000451154 SF3B1O75533 1304 aaKnown RBP eCLIP29.89■■■□□ 2.38
USP42-204ENST00000451154 GBP2P32456 591 aaPredicted RBP29.88■■■□□ 2.37
USP42-204ENST00000451154 EFNA5P52803 228 aa29.88■■■□□ 2.37
USP42-204ENST00000451154 NAB2Q15742 525 aa29.88■■■□□ 2.37
USP42-204ENST00000451154 FAM171A1Q5VUB5 890 aa29.88■■■□□ 2.37
USP42-204ENST00000451154 CEP57Q86XR8 500 aa29.88■■■□□ 2.37
USP42-204ENST00000451154 TMEM105Q8N8V8 129 aa29.88■■■□□ 2.37
USP42-204ENST00000451154 IGSF22Q8N9C0 903 aa29.88■■■□□ 2.37
USP42-204ENST00000451154 RHOBTB2Q9BYZ6 727 aa29.88■■■□□ 2.37
USP42-204ENST00000451154 MFSD1Q9H3U5 465 aa29.88■■■□□ 2.37
USP42-204ENST00000451154 PIDD1Q9HB75 910 aa29.88■■■□□ 2.37
USP42-204ENST00000451154 PP2D1A8MPX8 630 aa29.87■■■□□ 2.37
USP42-204ENST00000451154 C1RP00736 705 aa29.87■■■□□ 2.37
USP42-204ENST00000451154 CDC25AP30304 524 aa29.87■■■□□ 2.37
USP42-204ENST00000451154 IL17AQ16552 155 aa29.87■■■□□ 2.37
USP42-204ENST00000451154 ATF7IP2Q5U623 682 aa29.87■■■□□ 2.37
USP42-204ENST00000451154 TTPALQ9BTX7 342 aa29.87■■■□□ 2.37
USP42-204ENST00000451154 CLUHO75153 1309 aa29.87■■■□□ 2.37
USP42-204ENST00000451154 ZFHX2Q9C0A1 2572 aaPredicted RBP29.86■■■□□ 2.37
USP42-204ENST00000451154 E9PMD0 336 aa29.86■■■□□ 2.37
USP42-204ENST00000451154 H0Y858 1186 aa29.86■■■□□ 2.37
USP42-204ENST00000451154 K7ERI5 159 aa29.86■■■□□ 2.37
USP42-204ENST00000451154 CREMQ03060 361 aa29.86■■■□□ 2.37
USP42-204ENST00000451154 DCAF4L1Q3SXM0 396 aa29.86■■■□□ 2.37
USP42-204ENST00000451154 ASTLQ6HA08 431 aaPredicted RBP29.86■■■□□ 2.37
USP42-204ENST00000451154 RSAD2Q8WXG1 361 aa29.86■■■□□ 2.37
USP42-204ENST00000451154 STAMQ92783 540 aa29.86■■■□□ 2.37
USP42-204ENST00000451154 ATOH1Q92858 354 aaPredicted RBP29.86■■■□□ 2.37
USP42-204ENST00000451154 MYADMQ96S97 322 aa29.86■■■□□ 2.37
USP42-204ENST00000451154 CLSTN3Q9BQT9 956 aa29.86■■■□□ 2.37
USP42-204ENST00000451154 RAB34Q9BZG1 259 aa29.86■■■□□ 2.37
USP42-204ENST00000451154 PRKD2Q9BZL6 878 aa29.86■■■□□ 2.37
USP42-204ENST00000451154 DNM3Q9UQ16 869 aa29.86■■■□□ 2.37
USP42-204ENST00000451154 STK24Q9Y6E0 443 aa29.86■■■□□ 2.37
USP42-204ENST00000451154 DOCK8Q8NF50 2099 aa29.86■■■□□ 2.37
USP42-204ENST00000451154 CCDC169A6NNP5 214 aa29.85■■■□□ 2.37
USP42-204ENST00000451154 IGFBP6P24592 240 aaPredicted RBP29.85■■■□□ 2.37
USP42-204ENST00000451154 LNX1Q8TBB1 728 aaPredicted RBP29.85■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms