RNA–Protein interactions for RNA: ENST00000449771.6

RAPGEF3-205, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 6,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-205ENST00000449771 NOP53Q9NZM5 478 aaKnown RBP14.81□□□□□ -0.04
RAPGEF3-205ENST00000449771 VCPP55072 806 aaKnown RBP14.81□□□□□ -0.04
RAPGEF3-205ENST00000449771 TPI1P60174 286 aa14.81□□□□□ -0.04
RAPGEF3-205ENST00000449771 TMEM259Q4ZIN3 620 aa14.81□□□□□ -0.04
RAPGEF3-205ENST00000449771 SMARCAD1Q9H4L7 1026 aa14.81□□□□□ -0.04
RAPGEF3-205ENST00000449771 CAPN11Q9UMQ6 739 aa14.81□□□□□ -0.04
RAPGEF3-205ENST00000449771 TRIM33Q9UPN9 1127 aa14.81□□□□□ -0.04
RAPGEF3-205ENST00000449771 DAGLAQ9Y4D2 1042 aa14.81□□□□□ -0.04
RAPGEF3-205ENST00000449771 SLC4A7Q9Y6M7 1214 aa14.81□□□□□ -0.04
RAPGEF3-205ENST00000449771 PDIA2Q13087 525 aaKnown RBP14.81□□□□□ -0.04
RAPGEF3-205ENST00000449771 BAATQ14032 418 aaPredicted RBP14.81□□□□□ -0.04
RAPGEF3-205ENST00000449771 C12orf60Q5U649 245 aa14.81□□□□□ -0.04
RAPGEF3-205ENST00000449771 PGBD3Q8N328 593 aa14.81□□□□□ -0.04
RAPGEF3-205ENST00000449771 EFHBQ8N7U6 833 aa14.81□□□□□ -0.04
RAPGEF3-205ENST00000449771 NRBF2Q96F24 287 aa14.81□□□□□ -0.04
RAPGEF3-205ENST00000449771 CYTH2Q99418 400 aa14.81□□□□□ -0.04
RAPGEF3-205ENST00000449771 CENPKQ9BS16 269 aa14.81□□□□□ -0.04
RAPGEF3-205ENST00000449771 WNT8AQ9H1J5 351 aa14.81□□□□□ -0.04
RAPGEF3-205ENST00000449771 GEMIN8Q9NWZ8 242 aaKnown RBP14.81□□□□□ -0.04
RAPGEF3-205ENST00000449771 ZNF70Q9UC06 446 aaPredicted RBP14.81□□□□□ -0.04
RAPGEF3-205ENST00000449771 AGAP1Q9UPQ3 857 aa14.81□□□□□ -0.04
RAPGEF3-205ENST00000449771 MMEP08473 750 aa14.8□□□□□ -0.04
RAPGEF3-205ENST00000449771 GNL1P36915 607 aaPredicted RBP14.8□□□□□ -0.04
RAPGEF3-205ENST00000449771 GTF2H3Q13889 308 aa14.8□□□□□ -0.04
RAPGEF3-205ENST00000449771 EMBQ6PCB8 327 aa14.8□□□□□ -0.04
RAPGEF3-205ENST00000449771 BFARQ9NZS9 450 aa14.8□□□□□ -0.04
RAPGEF3-205ENST00000449771 KIF28PB7ZC32 967 aa14.8□□□□□ -0.04
RAPGEF3-205ENST00000449771 IRF1P10914 325 aa14.8□□□□□ -0.04
RAPGEF3-205ENST00000449771 PMS2P54278 862 aa14.8□□□□□ -0.04
RAPGEF3-205ENST00000449771 EPAS1Q99814 870 aa14.8□□□□□ -0.04
RAPGEF3-205ENST00000449771 TEX13BQ9BXU2 312 aa14.8□□□□□ -0.04
RAPGEF3-205ENST00000449771 CLCA2Q9UQC9 943 aa14.8□□□□□ -0.04
RAPGEF3-205ENST00000449771 JCADQ9P266 1359 aa14.8□□□□□ -0.04
RAPGEF3-205ENST00000449771 NCK2O43639 380 aa14.8□□□□□ -0.04
RAPGEF3-205ENST00000449771 SYF2O95926 243 aaKnown RBP14.8□□□□□ -0.04
RAPGEF3-205ENST00000449771 HMBSP08397 361 aa14.8□□□□□ -0.04
RAPGEF3-205ENST00000449771 NMT1P30419 496 aaKnown RBP14.8□□□□□ -0.04
RAPGEF3-205ENST00000449771 HSD17B4P51659 736 aa14.8□□□□□ -0.04
RAPGEF3-205ENST00000449771 TMEM62Q0P6H9 643 aa14.8□□□□□ -0.04
RAPGEF3-205ENST00000449771 IER5Q5VY09 327 aa14.8□□□□□ -0.04
RAPGEF3-205ENST00000449771 FAM117BQ6P1L5 589 aa14.8□□□□□ -0.04
RAPGEF3-205ENST00000449771 ELAC2Q9BQ52 826 aaKnown RBP14.8□□□□□ -0.04
RAPGEF3-205ENST00000449771 GRAMD1BQ3KR37 738 aa14.8□□□□□ -0.04
RAPGEF3-205ENST00000449771 ZBED8Q8IZ13 594 aa14.8□□□□□ -0.04
RAPGEF3-205ENST00000449771 NSUN4Q96CB9 384 aaKnown RBP14.8□□□□□ -0.04
RAPGEF3-205ENST00000449771 FAM96AQ9H5X1 160 aa14.8□□□□□ -0.04
RAPGEF3-205ENST00000449771 RGL1Q9NZL6 768 aa14.8□□□□□ -0.04
RAPGEF3-205ENST00000449771 PNPLA7Q6ZV29 1317 aa14.8□□□□□ -0.04
RAPGEF3-205ENST00000449771 ATP9BO43861 1147 aa14.8□□□□□ -0.04
RAPGEF3-205ENST00000449771 RARBP10826 455 aa14.8□□□□□ -0.04
RAPGEF3-205ENST00000449771 EEF1DP29692 281 aaKnown RBP14.8□□□□□ -0.04
RAPGEF3-205ENST00000449771 SYTL3Q4VX76 610 aa14.8□□□□□ -0.04
RAPGEF3-205ENST00000449771 PID1Q7Z2X4 250 aa14.8□□□□□ -0.04
RAPGEF3-205ENST00000449771 LPAR1Q92633 364 aa14.8□□□□□ -0.04
RAPGEF3-205ENST00000449771 KIF17Q9P2E2 1029 aa14.8□□□□□ -0.04
RAPGEF3-205ENST00000449771 FLT1P17948 1338 aa14.8□□□□□ -0.04
RAPGEF3-205ENST00000449771 NR1H3Q13133 447 aa14.79□□□□□ -0.04
RAPGEF3-205ENST00000449771 PPHLN1Q8NEY8 458 aaKnown RBP14.79□□□□□ -0.04
RAPGEF3-205ENST00000449771 GGA3Q9NZ52 723 aa14.79□□□□□ -0.04
RAPGEF3-205ENST00000449771 NRKQ7Z2Y5 1582 aa14.79□□□□□ -0.04
RAPGEF3-205ENST00000449771 MORF4L2Q15014 288 aa14.79□□□□□ -0.04
RAPGEF3-205ENST00000449771 SEPT5Q99719 369 aaPredicted RBP14.79□□□□□ -0.04
RAPGEF3-205ENST00000449771 TMEM132DQ14C87 1099 aa14.79□□□□□ -0.04
RAPGEF3-205ENST00000449771 WDR72Q3MJ13 1102 aa14.79□□□□□ -0.04
RAPGEF3-205ENST00000449771 ZC3H18Q86VM9 953 aaKnown RBP14.79□□□□□ -0.04
RAPGEF3-205ENST00000449771 DDIASQ8IXT1 998 aa14.79□□□□□ -0.04
RAPGEF3-205ENST00000449771 SNF8Q96H20 258 aa14.79□□□□□ -0.04
RAPGEF3-205ENST00000449771 TIPINQ9BVW5 301 aa14.79□□□□□ -0.04
RAPGEF3-205ENST00000449771 YIPF2Q9BWQ6 316 aa14.79□□□□□ -0.04
RAPGEF3-205ENST00000449771 TMEM60Q9H2L4 133 aa14.79□□□□□ -0.04
RAPGEF3-205ENST00000449771 PCDHB8Q9UN66 801 aa14.79□□□□□ -0.04
RAPGEF3-205ENST00000449771 PRRG1O14668 218 aa14.79□□□□□ -0.04
RAPGEF3-205ENST00000449771 SNX17Q15036 470 aa14.79□□□□□ -0.04
RAPGEF3-205ENST00000449771 FASTKD1Q53R41 847 aaKnown RBP14.79□□□□□ -0.04
RAPGEF3-205ENST00000449771 ANKS3Q6ZW76 656 aa14.79□□□□□ -0.04
RAPGEF3-205ENST00000449771 ASAP3Q8TDY4 903 aa14.79□□□□□ -0.04
RAPGEF3-205ENST00000449771 SMYD3Q9H7B4 428 aa14.79□□□□□ -0.04
RAPGEF3-205ENST00000449771 SNX9Q9Y5X1 595 aa14.79□□□□□ -0.04
RAPGEF3-205ENST00000449771 CYP26A1O43174 497 aa14.79□□□□□ -0.04
RAPGEF3-205ENST00000449771 RPS6KA5O75582 802 aa14.79□□□□□ -0.04
RAPGEF3-205ENST00000449771 XKR3Q5GH77 459 aa14.79□□□□□ -0.04
RAPGEF3-205ENST00000449771 USP6NLQ92738 828 aa14.79□□□□□ -0.04
RAPGEF3-205ENST00000449771 SPAG7O75391 227 aa14.78□□□□□ -0.04
RAPGEF3-205ENST00000449771 RBP5P82980 135 aa14.78□□□□□ -0.04
RAPGEF3-205ENST00000449771 EFTUD2Q15029 972 aaKnown RBP eCLIP14.78□□□□□ -0.04
RAPGEF3-205ENST00000449771 CAPRIN2Q6IMN6 1127 aaKnown RBP14.78□□□□□ -0.04
RAPGEF3-205ENST00000449771 FRMD5Q7Z6J6 570 aa14.78□□□□□ -0.04
RAPGEF3-205ENST00000449771 SRBD1Q8N5C6 995 aaKnown RBP14.78□□□□□ -0.04
RAPGEF3-205ENST00000449771 TSSK1BQ9BXA7 367 aa14.78□□□□□ -0.04
RAPGEF3-205ENST00000449771 HSPBP1Q9NZL4 362 aa14.78□□□□□ -0.04
RAPGEF3-205ENST00000449771 SFMBT1Q9UHJ3 866 aa14.78□□□□□ -0.04
RAPGEF3-205ENST00000449771 ADAM21Q9UKJ8 722 aa14.78□□□□□ -0.04
RAPGEF3-205ENST00000449771 ZNF521Q96K83 1311 aa14.78□□□□□ -0.04
RAPGEF3-205ENST00000449771 KDM6BO15054 1643 aa14.78□□□□□ -0.04
RAPGEF3-205ENST00000449771 POLRMTO00411 1230 aaKnown RBP14.78□□□□□ -0.04
RAPGEF3-205ENST00000449771 PSMD14O00487 310 aa14.78□□□□□ -0.04
RAPGEF3-205ENST00000449771 HIBCHQ6NVY1 386 aaPredicted RBP14.78□□□□□ -0.04
RAPGEF3-205ENST00000449771 FAM47EQ6ZV65 393 aa14.78□□□□□ -0.04
RAPGEF3-205ENST00000449771 NR1H4Q96RI1 486 aaPredicted RBP14.78□□□□□ -0.04
RAPGEF3-205ENST00000449771 SLC13A1Q9BZW2 595 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms