RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 PLS3P13797 630 aa16.02■□□□□ 0.16
USP39-206ENST00000448971 ME1P48163 572 aa16.02■□□□□ 0.16
USP39-206ENST00000448971 PLCB3Q01970 1234 aa16.02■□□□□ 0.16
USP39-206ENST00000448971 RNASELQ05823 741 aaKnown RBP16.02■□□□□ 0.16
USP39-206ENST00000448971 ATL3Q6DD88 541 aa16.02■□□□□ 0.16
USP39-206ENST00000448971 SYCE2Q6PIF2 218 aa16.02■□□□□ 0.16
USP39-206ENST00000448971 CCDC73Q6ZRK6 1079 aa16.02■□□□□ 0.16
USP39-206ENST00000448971 LRRC55Q6ZSA7 311 aa16.02■□□□□ 0.16
USP39-206ENST00000448971 SUGP1Q8IWZ8 645 aaKnown RBP16.02■□□□□ 0.16
USP39-206ENST00000448971 RSPH1Q8WYR4 309 aa16.02■□□□□ 0.16
USP39-206ENST00000448971 NXF3Q9H4D5 531 aaKnown RBP16.02■□□□□ 0.16
USP39-206ENST00000448971 LARSQ9P2J5 1176 aaKnown RBP16.02■□□□□ 0.16
USP39-206ENST00000448971 LZTS1Q9Y250 596 aa16.02■□□□□ 0.16
USP39-206ENST00000448971 HES2Q9Y543 173 aa16.02■□□□□ 0.16
USP39-206ENST00000448971 VPS13AQ96RL7 3174 aa16.01■□□□□ 0.15
USP39-206ENST00000448971 FSD2A1L4K1 749 aa16.01■□□□□ 0.15
USP39-206ENST00000448971 K7ERI5 159 aa16.01■□□□□ 0.15
USP39-206ENST00000448971 ACKR2O00590 384 aa16.01■□□□□ 0.15
USP39-206ENST00000448971 CUTAO60888 179 aa16.01■□□□□ 0.15
USP39-206ENST00000448971 ZC3H11AO75152 810 aaKnown RBP eCLIP16.01■□□□□ 0.15
USP39-206ENST00000448971 EDN1P05305 212 aa16.01■□□□□ 0.15
USP39-206ENST00000448971 AVPR2P30518 371 aa16.01■□□□□ 0.15
USP39-206ENST00000448971 SMTNP53814 917 aa16.01■□□□□ 0.15
USP39-206ENST00000448971 VCPP55072 806 aaKnown RBP16.01■□□□□ 0.15
USP39-206ENST00000448971 KRT85P78386 507 aa16.01■□□□□ 0.15
USP39-206ENST00000448971 NOMO2Q5JPE7 1267 aa16.01■□□□□ 0.15
USP39-206ENST00000448971 ANKRD54Q6NXT1 300 aa16.01■□□□□ 0.15
USP39-206ENST00000448971 AGMOQ6ZNB7 445 aa16.01■□□□□ 0.15
USP39-206ENST00000448971 PDILTQ8N807 584 aa16.01■□□□□ 0.15
USP39-206ENST00000448971 SMG8Q8ND04 991 aaKnown RBP16.01■□□□□ 0.15
USP39-206ENST00000448971 MRPS27Q92552 414 aaKnown RBP16.01■□□□□ 0.15
USP39-206ENST00000448971 ZNF558Q96NG5 402 aa16.01■□□□□ 0.15
USP39-206ENST00000448971 GBP3Q9H0R5 595 aa16.01■□□□□ 0.15
USP39-206ENST00000448971 PDZD7Q9H5P4 517 aa16.01■□□□□ 0.15
USP39-206ENST00000448971 ARHGAP28Q9P2N2 729 aa16.01■□□□□ 0.15
USP39-206ENST00000448971 USP20Q9Y2K6 914 aa16.01■□□□□ 0.15
USP39-206ENST00000448971 ATP6V1DQ9Y5K8 247 aa16.01■□□□□ 0.15
USP39-206ENST00000448971 A0A1B0GUA9 196 aa16■□□□□ 0.15
USP39-206ENST00000448971 TTLL13PA6NNM8 815 aa16■□□□□ 0.15
USP39-206ENST00000448971 HIDE1A8MVS5 230 aa16■□□□□ 0.15
USP39-206ENST00000448971 K7ENM7 598 aa16■□□□□ 0.15
USP39-206ENST00000448971 PBX3P40426 434 aa16■□□□□ 0.15
USP39-206ENST00000448971 MLH1P40692 756 aa16■□□□□ 0.15
USP39-206ENST00000448971 STRN3Q13033 797 aa16■□□□□ 0.15
USP39-206ENST00000448971 PTPN21Q16825 1174 aa16■□□□□ 0.15
USP39-206ENST00000448971 ARSHQ5FYA8 562 aa16■□□□□ 0.15
USP39-206ENST00000448971 ATF7IP2Q5U623 682 aa16■□□□□ 0.15
USP39-206ENST00000448971 APBB1IPQ7Z5R6 666 aaPredicted RBP16■□□□□ 0.15
USP39-206ENST00000448971 MRPL10Q7Z7H8 261 aaKnown RBP16■□□□□ 0.15
USP39-206ENST00000448971 SPIRE2Q8WWL2 714 aa16■□□□□ 0.15
USP39-206ENST00000448971 MRPL4Q9BYD3 311 aaKnown RBP16■□□□□ 0.15
USP39-206ENST00000448971 PARVGQ9HBI0 331 aa16■□□□□ 0.15
USP39-206ENST00000448971 UBN1Q9NPG3 1134 aa16■□□□□ 0.15
USP39-206ENST00000448971 TBC1D13Q9NVG8 400 aa16■□□□□ 0.15
USP39-206ENST00000448971 KCNG1Q9UIX4 513 aa16■□□□□ 0.15
USP39-206ENST00000448971 ZDHHC9Q9Y397 364 aa16■□□□□ 0.15
USP39-206ENST00000448971 RBM19Q9Y4C8 960 aaKnown RBP16■□□□□ 0.15
USP39-206ENST00000448971 FAM186AA6NE01 2351 aa16■□□□□ 0.15
USP39-206ENST00000448971 H0YCG3 227 aa15.99■□□□□ 0.15
USP39-206ENST00000448971 OFD1O75665 1012 aa15.99■□□□□ 0.15
USP39-206ENST00000448971 DDIT3P35638 169 aa15.99■□□□□ 0.15
USP39-206ENST00000448971 PPM1AP35813 382 aa15.99■□□□□ 0.15
USP39-206ENST00000448971 DCAF4L1Q3SXM0 396 aa15.99■□□□□ 0.15
USP39-206ENST00000448971 ZNF568Q3ZCX4 644 aa15.99■□□□□ 0.15
USP39-206ENST00000448971 KCNT2Q6UVM3 1135 aa15.99■□□□□ 0.15
USP39-206ENST00000448971 SV2BQ7L1I2 683 aa15.99■□□□□ 0.15
USP39-206ENST00000448971 DYMQ7RTS9 669 aa15.99■□□□□ 0.15
USP39-206ENST00000448971 MYCT1Q8N699 235 aa15.99■□□□□ 0.15
USP39-206ENST00000448971 FAM193BQ96PV7 902 aaPredicted RBP15.99■□□□□ 0.15
USP39-206ENST00000448971 RPS6KC1Q96S38 1066 aa15.99■□□□□ 0.15
USP39-206ENST00000448971 PANK2Q9BZ23 570 aa15.99■□□□□ 0.15
USP39-206ENST00000448971 TMEM134Q9H6X4 195 aa15.99■□□□□ 0.15
USP39-206ENST00000448971 PARP2Q9UGN5 583 aa15.99■□□□□ 0.15
USP39-206ENST00000448971 PUF60Q9UHX1 559 aaKnown RBP15.99■□□□□ 0.15
USP39-206ENST00000448971 DMDP11532 3685 aa15.99■□□□□ 0.15
USP39-206ENST00000448971 A0A087X0B3 334 aa15.98■□□□□ 0.15
USP39-206ENST00000448971 POMCP01189 267 aa15.98■□□□□ 0.15
USP39-206ENST00000448971 HOXB8P17481 243 aaPredicted RBP15.98■□□□□ 0.15
USP39-206ENST00000448971 AKAP5P24588 427 aa15.98■□□□□ 0.15
USP39-206ENST00000448971 SCNN1GP51170 649 aa15.98■□□□□ 0.15
USP39-206ENST00000448971 GIT2Q14161 759 aa15.98■□□□□ 0.15
USP39-206ENST00000448971 PLPP4Q5VZY2 271 aa15.98■□□□□ 0.15
USP39-206ENST00000448971 EEF1DP3Q658K8 133 aa15.98■□□□□ 0.15
USP39-206ENST00000448971 SHC4Q6S5L8 630 aa15.98■□□□□ 0.15
USP39-206ENST00000448971 DHX58Q96C10 678 aa15.98■□□□□ 0.15
USP39-206ENST00000448971 BICD1Q96G01 975 aa15.98■□□□□ 0.15
USP39-206ENST00000448971 SPATA32Q96LK8 384 aa15.98■□□□□ 0.15
USP39-206ENST00000448971 GAD1Q99259 594 aa15.98■□□□□ 0.15
USP39-206ENST00000448971 TCF25Q9BQ70 676 aa15.98■□□□□ 0.15
USP39-206ENST00000448971 APOL5Q9BWW9 433 aa15.98■□□□□ 0.15
USP39-206ENST00000448971 NGRNQ9NPE2 291 aaKnown RBP15.98■□□□□ 0.15
USP39-206ENST00000448971 FAM13BQ9NYF5 915 aa15.98■□□□□ 0.15
USP39-206ENST00000448971 ANKFY1Q9P2R3 1169 aa15.98■□□□□ 0.15
USP39-206ENST00000448971 PCDHA7Q9UN72 937 aa15.98■□□□□ 0.15
USP39-206ENST00000448971 GIT1Q9Y2X7 761 aa15.98■□□□□ 0.15
USP39-206ENST00000448971 TRAK2O60296 914 aa15.97■□□□□ 0.15
USP39-206ENST00000448971 PDGFBP01127 241 aaPredicted RBP15.97■□□□□ 0.15
USP39-206ENST00000448971 HARSP12081 509 aaKnown RBP15.97■□□□□ 0.15
USP39-206ENST00000448971 ALDH7A1P49419 539 aaKnown RBP15.97■□□□□ 0.15
USP39-206ENST00000448971 NCKAP1LP55160 1127 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms