RNA–Protein interactions for RNA: ENST00000448905.6

HMGB3-204, Transcript of high mobility group box 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGB3, Length 812 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-204ENST00000448905 CEP57Q86XR8 500 aa14.7□□□□□ -0.06
HMGB3-204ENST00000448905 GLYCTKQ8IVS8 523 aa14.7□□□□□ -0.06
HMGB3-204ENST00000448905 GSTCDQ8NEC7 633 aa14.7□□□□□ -0.06
HMGB3-204ENST00000448905 KCNG4Q8TDN1 519 aa14.7□□□□□ -0.06
HMGB3-204ENST00000448905 RSAD2Q8WXG1 361 aa14.7□□□□□ -0.06
HMGB3-204ENST00000448905 TNFRSF25Q93038 417 aa14.7□□□□□ -0.06
HMGB3-204ENST00000448905 SHDQ96IW2 340 aa14.7□□□□□ -0.06
HMGB3-204ENST00000448905 TTPALQ9BTX7 342 aa14.7□□□□□ -0.06
HMGB3-204ENST00000448905 ZMYM2Q9UBW7 1377 aa14.7□□□□□ -0.06
HMGB3-204ENST00000448905 FAM205CA6NFA0 338 aa14.69□□□□□ -0.06
HMGB3-204ENST00000448905 NARSO43776 548 aaKnown RBP14.69□□□□□ -0.06
HMGB3-204ENST00000448905 N4BP1O75113 896 aaKnown RBP14.69□□□□□ -0.06
HMGB3-204ENST00000448905 XYLBO75191 536 aa14.69□□□□□ -0.06
HMGB3-204ENST00000448905 PAPLNO95428 1278 aa14.69□□□□□ -0.06
HMGB3-204ENST00000448905 HNRNPA1P09651 372 aaKnown RBP eCLIP14.69□□□□□ -0.06
HMGB3-204ENST00000448905 FSHRP23945 695 aa14.69□□□□□ -0.06
HMGB3-204ENST00000448905 PPP2R5AQ15172 486 aa14.69□□□□□ -0.06
HMGB3-204ENST00000448905 FAM187BQ17R55 369 aa14.69□□□□□ -0.06
HMGB3-204ENST00000448905 FAM171A1Q5VUB5 890 aa14.69□□□□□ -0.06
HMGB3-204ENST00000448905 CWF19L1Q69YN2 538 aaKnown RBP14.69□□□□□ -0.06
HMGB3-204ENST00000448905 PHLDB3Q6NSJ2 640 aa14.69□□□□□ -0.06
HMGB3-204ENST00000448905 CDR2LQ86X02 465 aaPredicted RBP14.69□□□□□ -0.06
HMGB3-204ENST00000448905 CATSPER3Q86XQ3 398 aa14.69□□□□□ -0.06
HMGB3-204ENST00000448905 DEPTORQ8TB45 409 aa14.69□□□□□ -0.06
HMGB3-204ENST00000448905 GTF3C6Q969F1 213 aa14.69□□□□□ -0.06
HMGB3-204ENST00000448905 ZNF707Q96C28 371 aaPredicted RBP14.69□□□□□ -0.06
HMGB3-204ENST00000448905 B3GALT6Q96L58 329 aa14.69□□□□□ -0.06
HMGB3-204ENST00000448905 MYADMQ96S97 322 aa14.69□□□□□ -0.06
HMGB3-204ENST00000448905 POLR3CQ9BUI4 534 aaPredicted RBP14.69□□□□□ -0.06
HMGB3-204ENST00000448905 FZD8Q9H461 694 aa14.69□□□□□ -0.06
HMGB3-204ENST00000448905 SIT1Q9Y3P8 196 aa14.69□□□□□ -0.06
HMGB3-204ENST00000448905 A0A087WWV3 80 aa14.68□□□□□ -0.06
HMGB3-204ENST00000448905 ARHGEF35A5YM69 484 aa14.68□□□□□ -0.06
HMGB3-204ENST00000448905 F8W810 466 aa14.68□□□□□ -0.06
HMGB3-204ENST00000448905 DTNBO60941 627 aa14.68□□□□□ -0.06
HMGB3-204ENST00000448905 NEFLP07196 543 aa14.68□□□□□ -0.06
HMGB3-204ENST00000448905 MCM7P33993 719 aa14.68□□□□□ -0.06
HMGB3-204ENST00000448905 EFNA5P52803 228 aa14.68□□□□□ -0.06
HMGB3-204ENST00000448905 ME3Q16798 604 aa14.68□□□□□ -0.06
HMGB3-204ENST00000448905 UVSSAQ2YD98 709 aa14.68□□□□□ -0.06
HMGB3-204ENST00000448905 PPM1LQ5SGD2 360 aa14.68□□□□□ -0.06
HMGB3-204ENST00000448905 GET4Q7L5D6 327 aaPredicted RBP14.68□□□□□ -0.06
HMGB3-204ENST00000448905 ADSSL1Q8N142 457 aa14.68□□□□□ -0.06
HMGB3-204ENST00000448905 RABGGTAQ92696 567 aa14.68□□□□□ -0.06
HMGB3-204ENST00000448905 IFT74Q96LB3 600 aa14.68□□□□□ -0.06
HMGB3-204ENST00000448905 GPRC5CQ9NQ84 441 aa14.68□□□□□ -0.06
HMGB3-204ENST00000448905 CA14Q9ULX7 337 aa14.68□□□□□ -0.06
HMGB3-204ENST00000448905 ZDBF2Q9HCK1 2354 aa14.68□□□□□ -0.06
HMGB3-204ENST00000448905 ANHXE9PGG2 379 aa14.67□□□□□ -0.06
HMGB3-204ENST00000448905 ACKR2O00590 384 aa14.67□□□□□ -0.06
HMGB3-204ENST00000448905 TRAPPC3O43617 180 aa14.67□□□□□ -0.06
HMGB3-204ENST00000448905 SPATA31C1P0DKV0 1188 aa14.67□□□□□ -0.06
HMGB3-204ENST00000448905 RPL17P18621 184 aaKnown RBP14.67□□□□□ -0.06
HMGB3-204ENST00000448905 LIG1P18858 919 aa14.67□□□□□ -0.06
HMGB3-204ENST00000448905 CYP11B2P19099 503 aa14.67□□□□□ -0.06
HMGB3-204ENST00000448905 MUTP22033 750 aa14.67□□□□□ -0.06
HMGB3-204ENST00000448905 RPA1P27694 616 aa14.67□□□□□ -0.06
HMGB3-204ENST00000448905 NAMPTP43490 491 aa14.67□□□□□ -0.06
HMGB3-204ENST00000448905 NEK4P51957 841 aa14.67□□□□□ -0.06
HMGB3-204ENST00000448905 DCLRE1AQ6PJP8 1040 aa14.67□□□□□ -0.06
HMGB3-204ENST00000448905 PADI6Q6TGC4 694 aa14.67□□□□□ -0.06
HMGB3-204ENST00000448905 PRSS55Q6UWB4 352 aaPredicted RBP14.67□□□□□ -0.06
HMGB3-204ENST00000448905 RTL10Q7L3V2 364 aa14.67□□□□□ -0.06
HMGB3-204ENST00000448905 GPR152Q8TDT2 470 aa14.67□□□□□ -0.06
HMGB3-204ENST00000448905 PIK3R5Q8WYR1 880 aa14.67□□□□□ -0.06
HMGB3-204ENST00000448905 SLC2A4RGQ9NR83 387 aa14.67□□□□□ -0.06
HMGB3-204ENST00000448905 SNTG2Q9NY99 539 aa14.67□□□□□ -0.06
HMGB3-204ENST00000448905 CDH7Q9ULB5 785 aa14.67□□□□□ -0.06
HMGB3-204ENST00000448905 STK24Q9Y6E0 443 aa14.67□□□□□ -0.06
HMGB3-204ENST00000448905 CFAP54Q96N23 3096 aa14.66□□□□□ -0.06
HMGB3-204ENST00000448905 KRBA1A5PL33 1030 aa14.66□□□□□ -0.06
HMGB3-204ENST00000448905 CASTOR2A6NHX0 329 aa14.66□□□□□ -0.06
HMGB3-204ENST00000448905 POTEMA6NI47 508 aa14.66□□□□□ -0.06
HMGB3-204ENST00000448905 LMNAP02545 664 aaKnown RBP14.66□□□□□ -0.06
HMGB3-204ENST00000448905 HOXA9P31269 272 aa14.66□□□□□ -0.06
HMGB3-204ENST00000448905 ORC2Q13416 577 aaPredicted RBP14.66□□□□□ -0.06
HMGB3-204ENST00000448905 GNL2Q13823 731 aaKnown RBP14.66□□□□□ -0.06
HMGB3-204ENST00000448905 PSMD5Q16401 504 aa14.66□□□□□ -0.06
HMGB3-204ENST00000448905 RTP2Q5QGT7 225 aa14.66□□□□□ -0.06
HMGB3-204ENST00000448905 HAUS3Q68CZ6 603 aa14.66□□□□□ -0.06
HMGB3-204ENST00000448905 CDCA2Q69YH5 1023 aaPredicted RBP14.66□□□□□ -0.06
HMGB3-204ENST00000448905 ZC3H14Q6PJT7 736 aaKnown RBP14.66□□□□□ -0.06
HMGB3-204ENST00000448905 MTSS1LQ765P7 747 aa14.66□□□□□ -0.06
HMGB3-204ENST00000448905 GRASPQ7Z6J2 395 aaPredicted RBP14.66□□□□□ -0.06
HMGB3-204ENST00000448905 NSUN7Q8NE18 718 aaKnown RBP14.66□□□□□ -0.06
HMGB3-204ENST00000448905 LNX1Q8TBB1 728 aaPredicted RBP14.66□□□□□ -0.06
HMGB3-204ENST00000448905 CLSTN3Q9BQT9 956 aa14.66□□□□□ -0.06
HMGB3-204ENST00000448905 TBC1D17Q9HA65 648 aa14.66□□□□□ -0.06
HMGB3-204ENST00000448905 ARHGEF3Q9NR81 526 aa14.66□□□□□ -0.06
HMGB3-204ENST00000448905 POLIQ9UNA4 740 aa14.66□□□□□ -0.06
HMGB3-204ENST00000448905 K7ERI5 159 aa14.65□□□□□ -0.06
HMGB3-204ENST00000448905 B3GAT3O94766 335 aa14.65□□□□□ -0.06
HMGB3-204ENST00000448905 PRKCBP05771 671 aa14.65□□□□□ -0.06
HMGB3-204ENST00000448905 C8AP07357 584 aa14.65□□□□□ -0.06
HMGB3-204ENST00000448905 PFKPQ01813 784 aa14.65□□□□□ -0.06
HMGB3-204ENST00000448905 DCAF4L1Q3SXM0 396 aa14.65□□□□□ -0.06
HMGB3-204ENST00000448905 SPECC1Q5M775 1068 aa14.65□□□□□ -0.06
HMGB3-204ENST00000448905 NOSTRINQ8IVI9 506 aa14.65□□□□□ -0.06
HMGB3-204ENST00000448905 HASPINQ8TF76 798 aa14.65□□□□□ -0.06
HMGB3-204ENST00000448905 KIFAP3Q92845 792 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms