RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 FAM92AA1XBS5 289 aa9.4□□□□□ -0.91
NIPBL-202ENST00000448238 ATP9AO75110 1047 aa9.4□□□□□ -0.91
NIPBL-202ENST00000448238 FEN1P39748 380 aaKnown RBP9.4□□□□□ -0.91
NIPBL-202ENST00000448238 TOGARAM2Q6ZUX3 1019 aa9.4□□□□□ -0.91
NIPBL-202ENST00000448238 CCDC189A1A4V9 331 aa9.39□□□□□ -0.91
NIPBL-202ENST00000448238 KCNQ4P56696 695 aa9.39□□□□□ -0.91
NIPBL-202ENST00000448238 PTPN12Q05209 780 aaKnown RBP9.39□□□□□ -0.91
NIPBL-202ENST00000448238 ZSWIM7Q19AV6 140 aa9.39□□□□□ -0.91
NIPBL-202ENST00000448238 SYTL3Q4VX76 610 aa9.39□□□□□ -0.91
NIPBL-202ENST00000448238 LAYNQ6UX15 382 aa9.39□□□□□ -0.91
NIPBL-202ENST00000448238 ZNF513Q8N8E2 541 aaPredicted RBP9.39□□□□□ -0.91
NIPBL-202ENST00000448238 CEP72Q9P209 647 aa9.39□□□□□ -0.91
NIPBL-202ENST00000448238 CDY2AQ9Y6F7 541 aa9.39□□□□□ -0.91
NIPBL-202ENST00000448238 CDY1Q9Y6F8 540 aa9.39□□□□□ -0.91
NIPBL-202ENST00000448238 G3V2T6 193 aa9.39□□□□□ -0.91
NIPBL-202ENST00000448238 PSMA2P25787 234 aa9.39□□□□□ -0.91
NIPBL-202ENST00000448238 RAB25P57735 213 aa9.39□□□□□ -0.91
NIPBL-202ENST00000448238 PLOD1Q02809 727 aaPredicted RBP9.39□□□□□ -0.91
NIPBL-202ENST00000448238 VPS35Q96QK1 796 aa9.39□□□□□ -0.91
NIPBL-202ENST00000448238 TTC7AQ9ULT0 858 aaPredicted RBP9.39□□□□□ -0.91
NIPBL-202ENST00000448238 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.39□□□□□ -0.91
NIPBL-202ENST00000448238 KPNA6O60684 536 aa9.39□□□□□ -0.91
NIPBL-202ENST00000448238 TTC39CQ8N584 583 aa9.39□□□□□ -0.91
NIPBL-202ENST00000448238 ANKRD44Q8N8A2 993 aa9.39□□□□□ -0.91
NIPBL-202ENST00000448238 ECSITQ9BQ95 431 aa9.39□□□□□ -0.91
NIPBL-202ENST00000448238 CSADQ9Y600 493 aa9.39□□□□□ -0.91
NIPBL-202ENST00000448238 FCGR1AP12314 374 aa9.39□□□□□ -0.91
NIPBL-202ENST00000448238 GJA1P17302 382 aa9.39□□□□□ -0.91
NIPBL-202ENST00000448238 MAN2A1Q16706 1144 aa9.39□□□□□ -0.91
NIPBL-202ENST00000448238 NSMFQ6X4W1 530 aa9.39□□□□□ -0.91
NIPBL-202ENST00000448238 CPXCR1Q8N123 301 aa9.39□□□□□ -0.91
NIPBL-202ENST00000448238 CNOT6LQ96LI5 555 aaKnown RBP9.39□□□□□ -0.91
NIPBL-202ENST00000448238 NSFL1CQ9UNZ2 370 aaKnown RBP9.39□□□□□ -0.91
NIPBL-202ENST00000448238 PA2G4Q9UQ80 394 aaKnown RBP9.39□□□□□ -0.91
NIPBL-202ENST00000448238 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.39□□□□□ -0.91
NIPBL-202ENST00000448238 TESPA1A2RU30 521 aaPredicted RBP9.39□□□□□ -0.91
NIPBL-202ENST00000448238 TLR2O60603 784 aa9.39□□□□□ -0.91
NIPBL-202ENST00000448238 NPEPPSP55786 919 aa9.39□□□□□ -0.91
NIPBL-202ENST00000448238 TXNDC11Q6PKC3 985 aa9.39□□□□□ -0.91
NIPBL-202ENST00000448238 SVOPQ8N4V2 548 aa9.39□□□□□ -0.91
NIPBL-202ENST00000448238 MB21D1Q8N884 522 aa9.39□□□□□ -0.91
NIPBL-202ENST00000448238 C17orf80Q9BSJ5 609 aa9.39□□□□□ -0.91
NIPBL-202ENST00000448238 PRKD2Q9BZL6 878 aa9.39□□□□□ -0.91
NIPBL-202ENST00000448238 PPP6R2O75170 966 aa9.39□□□□□ -0.91
NIPBL-202ENST00000448238 TMA16Q96EY4 203 aaKnown RBP9.39□□□□□ -0.91
NIPBL-202ENST00000448238 CCDC177Q9NQR7 707 aaPredicted RBP9.39□□□□□ -0.91
NIPBL-202ENST00000448238 KPNA5O15131 536 aa9.39□□□□□ -0.91
NIPBL-202ENST00000448238 PSMD3O43242 534 aa9.39□□□□□ -0.91
NIPBL-202ENST00000448238 BMP10O95393 424 aa9.39□□□□□ -0.91
NIPBL-202ENST00000448238 GGPS1O95749 300 aa9.39□□□□□ -0.91
NIPBL-202ENST00000448238 HSD3B1P14060 373 aa9.39□□□□□ -0.91
NIPBL-202ENST00000448238 RGS4P49798 205 aa9.39□□□□□ -0.91
NIPBL-202ENST00000448238 FAM26FQ5R3K3 315 aa9.39□□□□□ -0.91
NIPBL-202ENST00000448238 C10orf53Q8N6V4 93 aa9.39□□□□□ -0.91
NIPBL-202ENST00000448238 POMGNT2Q8NAT1 580 aa9.39□□□□□ -0.91
NIPBL-202ENST00000448238 SNRNP27Q8WVK2 155 aaKnown RBP9.39□□□□□ -0.91
NIPBL-202ENST00000448238 EHD1Q9H4M9 534 aa9.39□□□□□ -0.91
NIPBL-202ENST00000448238 SUGCTQ9HAC7 445 aa9.39□□□□□ -0.91
NIPBL-202ENST00000448238 FBXO28Q9NVF7 368 aa9.39□□□□□ -0.91
NIPBL-202ENST00000448238 F8W810 466 aa9.38□□□□□ -0.91
NIPBL-202ENST00000448238 LYNP07948 512 aa9.38□□□□□ -0.91
NIPBL-202ENST00000448238 RXRAP19793 462 aa9.38□□□□□ -0.91
NIPBL-202ENST00000448238 NR2F2P24468 414 aa9.38□□□□□ -0.91
NIPBL-202ENST00000448238 MAGOHP61326 146 aaKnown RBP9.38□□□□□ -0.91
NIPBL-202ENST00000448238 ALFQ53S48 1182 aa9.38□□□□□ -0.91
NIPBL-202ENST00000448238 RACGAP1Q9H0H5 632 aa9.38□□□□□ -0.91
NIPBL-202ENST00000448238 DSN1Q9H410 356 aa9.38□□□□□ -0.91
NIPBL-202ENST00000448238 VHLP40337 213 aa9.38□□□□□ -0.91
NIPBL-202ENST00000448238 PRIM2P49643 509 aa9.38□□□□□ -0.91
NIPBL-202ENST00000448238 HIRAP54198 1017 aaPredicted RBP9.38□□□□□ -0.91
NIPBL-202ENST00000448238 MTTPP55157 894 aa9.38□□□□□ -0.91
NIPBL-202ENST00000448238 EXOSC10Q01780 885 aaKnown RBP9.38□□□□□ -0.91
NIPBL-202ENST00000448238 ALDH6A1Q02252 535 aaKnown RBP9.38□□□□□ -0.91
NIPBL-202ENST00000448238 ACTN3Q08043 901 aaPredicted RBP9.38□□□□□ -0.91
NIPBL-202ENST00000448238 KBTBD12Q3ZCT8 623 aa9.38□□□□□ -0.91
NIPBL-202ENST00000448238 ZCCHC7Q8N3Z6 543 aaKnown RBP9.38□□□□□ -0.91
NIPBL-202ENST00000448238 RIC8BQ9NVN3 520 aa9.38□□□□□ -0.91
NIPBL-202ENST00000448238 ASNSD1Q9NWL6 643 aa9.38□□□□□ -0.91
NIPBL-202ENST00000448238 ZNF624Q9P2J8 865 aaPredicted RBP9.38□□□□□ -0.91
NIPBL-202ENST00000448238 PHF11Q9UIL8 331 aa9.38□□□□□ -0.91
NIPBL-202ENST00000448238 MYL12AP19105 171 aa9.38□□□□□ -0.91
NIPBL-202ENST00000448238 TRIP10Q15642 601 aa9.38□□□□□ -0.91
NIPBL-202ENST00000448238 OR6P1Q8NGX9 317 aa9.38□□□□□ -0.91
NIPBL-202ENST00000448238 CCDC28BQ9BUN5 200 aa9.38□□□□□ -0.91
NIPBL-202ENST00000448238 TRIM10Q9UDY6 481 aa9.38□□□□□ -0.91
NIPBL-202ENST00000448238 IRAK3Q9Y616 596 aa9.38□□□□□ -0.91
NIPBL-202ENST00000448238 SOS1Q07889 1333 aaPredicted RBP9.38□□□□□ -0.91
NIPBL-202ENST00000448238 RAPGEF3O95398 923 aa9.38□□□□□ -0.91
NIPBL-202ENST00000448238 NPR2P20594 1047 aa9.38□□□□□ -0.91
NIPBL-202ENST00000448238 SARSP49591 514 aaKnown RBP9.38□□□□□ -0.91
NIPBL-202ENST00000448238 EIF6P56537 245 aaKnown RBP9.38□□□□□ -0.91
NIPBL-202ENST00000448238 PNOCQ13519 176 aa9.38□□□□□ -0.91
NIPBL-202ENST00000448238 PDCD4Q53EL6 469 aaKnown RBP9.38□□□□□ -0.91
NIPBL-202ENST00000448238 ZNF57Q68EA5 555 aaPredicted RBP9.38□□□□□ -0.91
NIPBL-202ENST00000448238 CACTIN-AS1Q8N1I8 211 aa9.38□□□□□ -0.91
NIPBL-202ENST00000448238 C7orf31Q8N865 590 aa9.38□□□□□ -0.91
NIPBL-202ENST00000448238 PFDN2Q9UHV9 154 aa9.38□□□□□ -0.91
NIPBL-202ENST00000448238 METTL21EPA6NDL7 271 aa9.38□□□□□ -0.91
NIPBL-202ENST00000448238 ADCY6O43306 1168 aa9.38□□□□□ -0.91
NIPBL-202ENST00000448238 OR52Z1P0C646 297 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms