RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 NACC1Q96RE7 527 aa13.8□□□□□ -0.2
SSR4-205ENST00000447375 PARD6AQ9NPB6 346 aa13.8□□□□□ -0.2
SSR4-205ENST00000447375 SLC2A4RGQ9NR83 387 aa13.8□□□□□ -0.2
SSR4-205ENST00000447375 SUCLA2Q9P2R7 463 aaPredicted RBP13.8□□□□□ -0.2
SSR4-205ENST00000447375 GPR179Q6PRD1 2367 aa13.8□□□□□ -0.2
SSR4-205ENST00000447375 A0A087WWV3 80 aa13.79□□□□□ -0.2
SSR4-205ENST00000447375 A0A0U1RQF3 1178 aa13.79□□□□□ -0.2
SSR4-205ENST00000447375 CARNS1A5YM72 827 aa13.79□□□□□ -0.2
SSR4-205ENST00000447375 GAS2O43903 313 aaKnown RBP13.79□□□□□ -0.2
SSR4-205ENST00000447375 CNPP09543 421 aaKnown RBP13.79□□□□□ -0.2
SSR4-205ENST00000447375 CCT6AP40227 531 aaKnown RBP13.79□□□□□ -0.2
SSR4-205ENST00000447375 GPC3P51654 580 aa13.79□□□□□ -0.2
SSR4-205ENST00000447375 SF3A1Q15459 793 aaKnown RBP13.79□□□□□ -0.2
SSR4-205ENST00000447375 ECM1Q16610 540 aa13.79□□□□□ -0.2
SSR4-205ENST00000447375 FAM173BQ6P4H8 233 aa13.79□□□□□ -0.2
SSR4-205ENST00000447375 CYP26C1Q6V0L0 522 aa13.79□□□□□ -0.2
SSR4-205ENST00000447375 ZNF598Q86UK7 904 aaKnown RBP13.79□□□□□ -0.2
SSR4-205ENST00000447375 ANGPTL2Q9UKU9 493 aa13.79□□□□□ -0.2
SSR4-205ENST00000447375 CLUHO75153 1309 aa13.79□□□□□ -0.2
SSR4-205ENST00000447375 CACNA1IQ9P0X4 2223 aa13.79□□□□□ -0.2
SSR4-205ENST00000447375 CHD8Q9HCK8 2581 aa13.78□□□□□ -0.2
SSR4-205ENST00000447375 USP24Q9UPU5 2620 aa13.78□□□□□ -0.2
SSR4-205ENST00000447375 ARID2Q68CP9 1835 aa13.78□□□□□ -0.2
SSR4-205ENST00000447375 KANSL1LA0AUZ9 987 aa13.78□□□□□ -0.2
SSR4-205ENST00000447375 VWA3AA6NCI4 1184 aa13.78□□□□□ -0.2
SSR4-205ENST00000447375 PP2D1A8MPX8 630 aa13.78□□□□□ -0.2
SSR4-205ENST00000447375 DGAT1O75907 488 aa13.78□□□□□ -0.2
SSR4-205ENST00000447375 SSBP05455 408 aaKnown RBP eCLIP13.78□□□□□ -0.2
SSR4-205ENST00000447375 GALTP07902 379 aa13.78□□□□□ -0.2
SSR4-205ENST00000447375 EIF4BP23588 611 aaKnown RBP13.78□□□□□ -0.2
SSR4-205ENST00000447375 SPEM2Q0P670 501 aa13.78□□□□□ -0.2
SSR4-205ENST00000447375 EMC2Q15006 297 aa13.78□□□□□ -0.2
SSR4-205ENST00000447375 PTPAQ15257 358 aa13.78□□□□□ -0.2
SSR4-205ENST00000447375 KRT79Q5XKE5 535 aa13.78□□□□□ -0.2
SSR4-205ENST00000447375 SPRYD3Q8NCJ5 442 aa13.78□□□□□ -0.2
SSR4-205ENST00000447375 BCL7CQ8WUZ0 217 aaPredicted RBP13.78□□□□□ -0.2
SSR4-205ENST00000447375 PRPF31Q8WWY3 499 aaKnown RBP13.78□□□□□ -0.2
SSR4-205ENST00000447375 TMEM143Q96AN5 459 aa13.78□□□□□ -0.2
SSR4-205ENST00000447375 MMTAG2Q9BU76 263 aaKnown RBP13.78□□□□□ -0.2
SSR4-205ENST00000447375 MAN1C1Q9NR34 630 aa13.78□□□□□ -0.2
SSR4-205ENST00000447375 CLIC4Q9Y696 253 aa13.78□□□□□ -0.2
SSR4-205ENST00000447375 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.78□□□□□ -0.2
SSR4-205ENST00000447375 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.77□□□□□ -0.21
SSR4-205ENST00000447375 ANHXE9PGG2 379 aa13.77□□□□□ -0.21
SSR4-205ENST00000447375 INPPL1O15357 1258 aa13.77□□□□□ -0.21
SSR4-205ENST00000447375 ASAP2O43150 1006 aa13.77□□□□□ -0.21
SSR4-205ENST00000447375 LAMP2P13473 410 aa13.77□□□□□ -0.21
SSR4-205ENST00000447375 DARSP14868 501 aaKnown RBP13.77□□□□□ -0.21
SSR4-205ENST00000447375 CDC25AP30304 524 aa13.77□□□□□ -0.21
SSR4-205ENST00000447375 SNW1Q13573 536 aaKnown RBP13.77□□□□□ -0.21
SSR4-205ENST00000447375 UBXN2BQ14CS0 331 aa13.77□□□□□ -0.21
SSR4-205ENST00000447375 ZNF410Q86VK4 478 aa13.77□□□□□ -0.21
SSR4-205ENST00000447375 RHPN2Q8IUC4 686 aa13.77□□□□□ -0.21
SSR4-205ENST00000447375 KCTD17Q8N5Z5 321 aa13.77□□□□□ -0.21
SSR4-205ENST00000447375 ST13P5Q8NFI4 369 aaPredicted RBP13.77□□□□□ -0.21
SSR4-205ENST00000447375 SNX29Q8TEQ0 813 aa13.77□□□□□ -0.21
SSR4-205ENST00000447375 TCP11Q8WWU5 503 aa13.77□□□□□ -0.21
SSR4-205ENST00000447375 PSPC1Q8WXF1 523 aaKnown RBP13.77□□□□□ -0.21
SSR4-205ENST00000447375 NELL1Q92832 810 aa13.77□□□□□ -0.21
SSR4-205ENST00000447375 AK8Q96MA6 479 aa13.77□□□□□ -0.21
SSR4-205ENST00000447375 VN1R3Q9BXE9 311 aa13.77□□□□□ -0.21
SSR4-205ENST00000447375 RHOBTB2Q9BYZ6 727 aa13.77□□□□□ -0.21
SSR4-205ENST00000447375 NRDE2Q9H7Z3 1164 aa13.77□□□□□ -0.21
SSR4-205ENST00000447375 XPNPEP1Q9NQW7 623 aa13.77□□□□□ -0.21
SSR4-205ENST00000447375 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.77□□□□□ -0.21
SSR4-205ENST00000447375 KIAA1024Q9UPX6 916 aa13.77□□□□□ -0.21
SSR4-205ENST00000447375 MTF2Q9Y483 593 aaPredicted RBP13.77□□□□□ -0.21
SSR4-205ENST00000447375 NUMBLQ9Y6R0 609 aa13.77□□□□□ -0.21
SSR4-205ENST00000447375 MORC2Q9Y6X9 1032 aaPredicted RBP13.77□□□□□ -0.21
SSR4-205ENST00000447375 ATRXP46100 2492 aa13.76□□□□□ -0.21
SSR4-205ENST00000447375 A0A087WZ62 844 aa13.76□□□□□ -0.21
SSR4-205ENST00000447375 FAM170BA6NMN3 283 aa13.76□□□□□ -0.21
SSR4-205ENST00000447375 LILRB3O75022 631 aa13.76□□□□□ -0.21
SSR4-205ENST00000447375 ZSCAN22P10073 491 aaPredicted RBP13.76□□□□□ -0.21
SSR4-205ENST00000447375 KCNA4P22459 653 aa13.76□□□□□ -0.21
SSR4-205ENST00000447375 ARL2P36404 184 aa13.76□□□□□ -0.21
SSR4-205ENST00000447375 MAGEA9P43362 315 aa13.76□□□□□ -0.21
SSR4-205ENST00000447375 GPC5P78333 572 aa13.76□□□□□ -0.21
SSR4-205ENST00000447375 LAMTOR4Q0VGL1 99 aa13.76□□□□□ -0.21
SSR4-205ENST00000447375 HTR4Q13639 388 aa13.76□□□□□ -0.21
SSR4-205ENST00000447375 HYIQ5T013 277 aa13.76□□□□□ -0.21
SSR4-205ENST00000447375 ELMSAN1Q6PJG2 1045 aa13.76□□□□□ -0.21
SSR4-205ENST00000447375 TSSK4Q6SA08 328 aa13.76□□□□□ -0.21
SSR4-205ENST00000447375 KSR1Q8IVT5 923 aa13.76□□□□□ -0.21
SSR4-205ENST00000447375 NLRP7Q8WX94 980 aa13.76□□□□□ -0.21
SSR4-205ENST00000447375 SMG7Q92540 1137 aaKnown RBP13.76□□□□□ -0.21
SSR4-205ENST00000447375 COL26A1Q96A83 441 aa13.76□□□□□ -0.21
SSR4-205ENST00000447375 ZNF668Q96K58 619 aaPredicted RBP13.76□□□□□ -0.21
SSR4-205ENST00000447375 CCDC43Q96MW1 224 aaKnown RBP13.76□□□□□ -0.21
SSR4-205ENST00000447375 MTRQ99707 1265 aa13.76□□□□□ -0.21
SSR4-205ENST00000447375 FDXACB1Q9BRP7 624 aaPredicted RBP13.76□□□□□ -0.21
SSR4-205ENST00000447375 DDX23Q9BUQ8 820 aaKnown RBP13.76□□□□□ -0.21
SSR4-205ENST00000447375 GCOM2Q9BZD3 368 aaPredicted RBP13.76□□□□□ -0.21
SSR4-205ENST00000447375 OSBPL6Q9BZF3 934 aa13.76□□□□□ -0.21
SSR4-205ENST00000447375 IFT122Q9HBG6 1241 aa13.76□□□□□ -0.21
SSR4-205ENST00000447375 MRPL17Q9NRX2 175 aaKnown RBP13.76□□□□□ -0.21
SSR4-205ENST00000447375 DDX19AQ9NUU7 478 aaKnown RBP13.76□□□□□ -0.21
SSR4-205ENST00000447375 TBC1D13Q9NVG8 400 aa13.76□□□□□ -0.21
SSR4-205ENST00000447375 STK39Q9UEW8 545 aa13.76□□□□□ -0.21
SSR4-205ENST00000447375 DPP7Q9UHL4 492 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms