RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 ZNF653Q96CK0 615 aa20.45■□□□□ 0.86
SDCBP-204ENST00000447182 ITIH2P19823 946 aa20.44■□□□□ 0.86
SDCBP-204ENST00000447182 ATP5DP30049 168 aa20.44■□□□□ 0.86
SDCBP-204ENST00000447182 IFNAR2P48551 515 aa20.44■□□□□ 0.86
SDCBP-204ENST00000447182 CRELD2Q6UXH1 353 aaPredicted RBP20.44■□□□□ 0.86
SDCBP-204ENST00000447182 SYDE1Q6ZW31 735 aaPredicted RBP20.44■□□□□ 0.86
SDCBP-204ENST00000447182 CPNE8Q86YQ8 564 aa20.44■□□□□ 0.86
SDCBP-204ENST00000447182 CHURC1Q8WUH1 139 aa20.44■□□□□ 0.86
SDCBP-204ENST00000447182 BTBD6Q96KE9 485 aa20.44■□□□□ 0.86
SDCBP-204ENST00000447182 DEFB129Q9H1M3 183 aa20.44■□□□□ 0.86
SDCBP-204ENST00000447182 CDR2Q01850 454 aa20.44■□□□□ 0.86
SDCBP-204ENST00000447182 MIER3Q7Z3K6 550 aa20.44■□□□□ 0.86
SDCBP-204ENST00000447182 CCDC25Q86WR0 208 aa20.44■□□□□ 0.86
SDCBP-204ENST00000447182 PPM1KQ8N3J5 372 aa20.44■□□□□ 0.86
SDCBP-204ENST00000447182 CCDC113Q9H0I3 377 aa20.44■□□□□ 0.86
SDCBP-204ENST00000447182 NOD2Q9HC29 1040 aa20.44■□□□□ 0.86
SDCBP-204ENST00000447182 HERC5Q9UII4 1024 aaKnown RBP20.44■□□□□ 0.86
SDCBP-204ENST00000447182 COQ4Q9Y3A0 265 aa20.44■□□□□ 0.86
SDCBP-204ENST00000447182 ZNFX1Q9P2E3 1918 aaKnown RBP20.43■□□□□ 0.86
SDCBP-204ENST00000447182 PLA2G6O60733 806 aa20.43■□□□□ 0.86
SDCBP-204ENST00000447182 CYP11B1P15538 503 aa20.43■□□□□ 0.86
SDCBP-204ENST00000447182 NF2P35240 595 aa20.43■□□□□ 0.86
SDCBP-204ENST00000447182 RARRES1P49788 294 aa20.43■□□□□ 0.86
SDCBP-204ENST00000447182 MAEAQ7L5Y9 396 aa20.43■□□□□ 0.86
SDCBP-204ENST00000447182 ZSWIM2Q8NEG5 633 aa20.43■□□□□ 0.86
SDCBP-204ENST00000447182 ARHGEF2Q92974 986 aaKnown RBP20.43■□□□□ 0.86
SDCBP-204ENST00000447182 CSRNP1Q96S65 589 aa20.43■□□□□ 0.86
SDCBP-204ENST00000447182 IWS1Q96ST2 819 aa20.43■□□□□ 0.86
SDCBP-204ENST00000447182 DDX23Q9BUQ8 820 aaKnown RBP20.43■□□□□ 0.86
SDCBP-204ENST00000447182 TDRD3Q9H7E2 651 aaKnown RBP20.43■□□□□ 0.86
SDCBP-204ENST00000447182 USP15Q9Y4E8 981 aaPredicted RBP20.43■□□□□ 0.86
SDCBP-204ENST00000447182 CLDN3O15551 220 aa20.42■□□□□ 0.86
SDCBP-204ENST00000447182 TCEA3O75764 348 aa20.42■□□□□ 0.86
SDCBP-204ENST00000447182 ELF1P32519 619 aa20.42■□□□□ 0.86
SDCBP-204ENST00000447182 MAN1A1P33908 653 aa20.42■□□□□ 0.86
SDCBP-204ENST00000447182 KRT17Q04695 432 aa20.42■□□□□ 0.86
SDCBP-204ENST00000447182 LONRF1Q17RB8 773 aa20.42■□□□□ 0.86
SDCBP-204ENST00000447182 CCDC38Q502W7 563 aa20.42■□□□□ 0.86
SDCBP-204ENST00000447182 SGO2Q562F6 1265 aa20.42■□□□□ 0.86
SDCBP-204ENST00000447182 HAUS6Q7Z4H7 955 aa20.42■□□□□ 0.86
SDCBP-204ENST00000447182 MAIP1Q8WWC4 291 aa20.42■□□□□ 0.86
SDCBP-204ENST00000447182 ATP6V0A4Q9HBG4 840 aa20.42■□□□□ 0.86
SDCBP-204ENST00000447182 ACP6Q9NPH0 428 aa20.42■□□□□ 0.86
SDCBP-204ENST00000447182 ABCF3Q9NUQ8 709 aa20.42■□□□□ 0.86
SDCBP-204ENST00000447182 ZHX2Q9Y6X8 837 aa20.42■□□□□ 0.86
SDCBP-204ENST00000447182 COL11A2P13942 1736 aaPredicted RBP20.42■□□□□ 0.86
SDCBP-204ENST00000447182 TMEM120BA0PK00 339 aa20.42■□□□□ 0.86
SDCBP-204ENST00000447182 TOM1O60784 492 aa20.42■□□□□ 0.86
SDCBP-204ENST00000447182 LYPLA2O95372 231 aa20.42■□□□□ 0.86
SDCBP-204ENST00000447182 ADRB2P07550 413 aa20.42■□□□□ 0.86
SDCBP-204ENST00000447182 ITGB5P18084 799 aa20.42■□□□□ 0.86
SDCBP-204ENST00000447182 GPC3P51654 580 aa20.42■□□□□ 0.86
SDCBP-204ENST00000447182 GALNTL6Q49A17 601 aa20.42■□□□□ 0.86
SDCBP-204ENST00000447182 VSTM1Q6UX27 236 aa20.42■□□□□ 0.86
SDCBP-204ENST00000447182 GBP7Q8N8V2 638 aaPredicted RBP20.42■□□□□ 0.86
SDCBP-204ENST00000447182 HELQQ8TDG4 1101 aa20.42■□□□□ 0.86
SDCBP-204ENST00000447182 ACER1Q8TDN7 264 aa20.42■□□□□ 0.86
SDCBP-204ENST00000447182 DDX1Q92499 740 aaKnown RBP20.42■□□□□ 0.86
SDCBP-204ENST00000447182 SEMA4DQ92854 862 aa20.42■□□□□ 0.86
SDCBP-204ENST00000447182 MASTLQ96GX5 879 aa20.42■□□□□ 0.86
SDCBP-204ENST00000447182 SNF8Q96H20 258 aa20.42■□□□□ 0.86
SDCBP-204ENST00000447182 TIPINQ9BVW5 301 aa20.42■□□□□ 0.86
SDCBP-204ENST00000447182 ECE2O60344 883 aa20.41■□□□□ 0.86
SDCBP-204ENST00000447182 TTC4O95801 387 aa20.41■□□□□ 0.86
SDCBP-204ENST00000447182 DLATP10515 647 aaKnown RBP20.41■□□□□ 0.86
SDCBP-204ENST00000447182 IVDP26440 423 aa20.41■□□□□ 0.86
SDCBP-204ENST00000447182 PDE6BP35913 854 aa20.41■□□□□ 0.86
SDCBP-204ENST00000447182 CAV1Q03135 178 aa20.41■□□□□ 0.86
SDCBP-204ENST00000447182 PTK6Q13882 451 aa20.41■□□□□ 0.86
SDCBP-204ENST00000447182 ZNF268Q14587 947 aaPredicted RBP20.41■□□□□ 0.86
SDCBP-204ENST00000447182 KRT39Q6A163 491 aa20.41■□□□□ 0.86
SDCBP-204ENST00000447182 ACAD10Q6JQN1 1059 aa20.41■□□□□ 0.86
SDCBP-204ENST00000447182 NIPA1Q7RTP0 329 aa20.41■□□□□ 0.86
SDCBP-204ENST00000447182 GJD4Q96KN9 370 aaPredicted RBP20.41■□□□□ 0.86
SDCBP-204ENST00000447182 POP1Q99575 1024 aaKnown RBP20.41■□□□□ 0.86
SDCBP-204ENST00000447182 DHX15O43143 795 aaKnown RBP20.41■□□□□ 0.86
SDCBP-204ENST00000447182 GRIN3BO60391 1043 aa20.41■□□□□ 0.86
SDCBP-204ENST00000447182 ACSL3O95573 720 aa20.41■□□□□ 0.86
SDCBP-204ENST00000447182 MAP2K1Q02750 393 aaPredicted RBP20.41■□□□□ 0.86
SDCBP-204ENST00000447182 SLC17A8Q8NDX2 589 aa20.41■□□□□ 0.86
SDCBP-204ENST00000447182 DYDC1Q8WWB3 177 aa20.41■□□□□ 0.86
SDCBP-204ENST00000447182 PLCD4Q9BRC7 762 aa20.41■□□□□ 0.86
SDCBP-204ENST00000447182 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.41■□□□□ 0.86
SDCBP-204ENST00000447182 KCNH7Q9NS40 1196 aa20.41■□□□□ 0.86
SDCBP-204ENST00000447182 DDX39AO00148 427 aaKnown RBP20.4■□□□□ 0.86
SDCBP-204ENST00000447182 O00370 1275 aa20.4■□□□□ 0.86
SDCBP-204ENST00000447182 SUN1O94901 812 aa20.4■□□□□ 0.86
SDCBP-204ENST00000447182 NCKAP1LP55160 1127 aa20.4■□□□□ 0.86
SDCBP-204ENST00000447182 FAM133BQ5BKY9 247 aaKnown RBP20.4■□□□□ 0.86
SDCBP-204ENST00000447182 CC2D2BQ6DHV5 1058 aa20.4■□□□□ 0.86
SDCBP-204ENST00000447182 FAM160B2Q86V87 743 aa20.4■□□□□ 0.86
SDCBP-204ENST00000447182 C7orf43Q8WVR3 580 aa20.4■□□□□ 0.86
SDCBP-204ENST00000447182 C1orf54Q8WWF1 131 aa20.4■□□□□ 0.86
SDCBP-204ENST00000447182 CKAP2Q8WWK9 683 aa20.4■□□□□ 0.86
SDCBP-204ENST00000447182 KIFAP3Q92845 792 aa20.4■□□□□ 0.86
SDCBP-204ENST00000447182 TMEM8AQ9HCN3 771 aa20.4■□□□□ 0.86
SDCBP-204ENST00000447182 ASIC3Q9UHC3 531 aa20.4■□□□□ 0.86
SDCBP-204ENST00000447182 AGAP1Q9UPQ3 857 aa20.4■□□□□ 0.86
SDCBP-204ENST00000447182 TCP11X1B4DZS4 312 aa20.39■□□□□ 0.86
SDCBP-204ENST00000447182 ONECUT3O60422 494 aaPredicted RBP20.39■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms