RNA–Protein interactions for RNA: ENST00000445388.5

SEC22C-208, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 5

Gene SEC22C, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-208ENST00000445388 STK38Q15208 465 aa16.81■□□□□ 0.28
SEC22C-208ENST00000445388 RRAGBQ5VZM2 374 aa16.81■□□□□ 0.28
SEC22C-208ENST00000445388 FAM178BQ8IXR5 827 aa16.81■□□□□ 0.28
SEC22C-208ENST00000445388 MYCT1Q8N699 235 aa16.81■□□□□ 0.28
SEC22C-208ENST00000445388 ZNF396Q96N95 335 aaPredicted RBP16.81■□□□□ 0.28
SEC22C-208ENST00000445388 ZHX3Q9H4I2 956 aa16.81■□□□□ 0.28
SEC22C-208ENST00000445388 LARSQ9P2J5 1176 aaKnown RBP16.81■□□□□ 0.28
SEC22C-208ENST00000445388 CCDC39Q9UFE4 941 aa16.81■□□□□ 0.28
SEC22C-208ENST00000445388 ODF2LQ9ULJ1 636 aa16.81■□□□□ 0.28
SEC22C-208ENST00000445388 MORC2Q9Y6X9 1032 aaPredicted RBP16.81■□□□□ 0.28
SEC22C-208ENST00000445388 FAM13AO94988 1023 aa16.8■□□□□ 0.28
SEC22C-208ENST00000445388 EFEMP2O95967 443 aa16.8■□□□□ 0.28
SEC22C-208ENST00000445388 F13A1P00488 732 aa16.8■□□□□ 0.28
SEC22C-208ENST00000445388 PROZP22891 400 aa16.8■□□□□ 0.28
SEC22C-208ENST00000445388 NCKAP1LP55160 1127 aa16.8■□□□□ 0.28
SEC22C-208ENST00000445388 STRN3Q13033 797 aa16.8■□□□□ 0.28
SEC22C-208ENST00000445388 COASYQ13057 564 aa16.8■□□□□ 0.28
SEC22C-208ENST00000445388 PTPN14Q15678 1187 aa16.8■□□□□ 0.28
SEC22C-208ENST00000445388 NAB2Q15742 525 aa16.8■□□□□ 0.28
SEC22C-208ENST00000445388 ZNF568Q3ZCX4 644 aa16.8■□□□□ 0.28
SEC22C-208ENST00000445388 DYMQ7RTS9 669 aa16.8■□□□□ 0.28
SEC22C-208ENST00000445388 HAUS6Q7Z4H7 955 aa16.8■□□□□ 0.28
SEC22C-208ENST00000445388 TCHPQ9BT92 498 aa16.8■□□□□ 0.28
SEC22C-208ENST00000445388 COLEC11Q9BWP8 271 aa16.8■□□□□ 0.28
SEC22C-208ENST00000445388 APOL5Q9BWW9 433 aa16.8■□□□□ 0.28
SEC22C-208ENST00000445388 DAXXQ9UER7 740 aaPredicted RBP16.8■□□□□ 0.28
SEC22C-208ENST00000445388 ZMYM2Q9UBW7 1377 aa16.79■□□□□ 0.28
SEC22C-208ENST00000445388 MYH11P35749 1972 aa16.79■□□□□ 0.28
SEC22C-208ENST00000445388 CASTOR2A6NHX0 329 aa16.79■□□□□ 0.28
SEC22C-208ENST00000445388 C2CD2LO14523 706 aa16.79■□□□□ 0.28
SEC22C-208ENST00000445388 SPTLC2O15270 562 aa16.79■□□□□ 0.28
SEC22C-208ENST00000445388 LILRB3O75022 631 aa16.79■□□□□ 0.28
SEC22C-208ENST00000445388 NR1I2O75469 434 aa16.79■□□□□ 0.28
SEC22C-208ENST00000445388 THP07101 528 aa16.79■□□□□ 0.28
SEC22C-208ENST00000445388 HARSP12081 509 aaKnown RBP16.79■□□□□ 0.28
SEC22C-208ENST00000445388 GRM5P41594 1212 aa16.79■□□□□ 0.28
SEC22C-208ENST00000445388 ZNF131P52739 623 aa16.79■□□□□ 0.28
SEC22C-208ENST00000445388 TUSC3Q13454 348 aa16.79■□□□□ 0.28
SEC22C-208ENST00000445388 SMAD4Q13485 552 aaKnown RBP16.79■□□□□ 0.28
SEC22C-208ENST00000445388 BMS1Q14692 1282 aaKnown RBP16.79■□□□□ 0.28
SEC22C-208ENST00000445388 SMAD2Q15796 467 aaKnown RBP16.79■□□□□ 0.28
SEC22C-208ENST00000445388 SEZ6Q53EL9 994 aa16.79■□□□□ 0.28
SEC22C-208ENST00000445388 GLRA4Q5JXX5 417 aa16.79■□□□□ 0.28
SEC22C-208ENST00000445388 ANKRD54Q6NXT1 300 aa16.79■□□□□ 0.28
SEC22C-208ENST00000445388 MPZL3Q6UWV2 235 aa16.79■□□□□ 0.28
SEC22C-208ENST00000445388 TMEM184AQ6ZMB5 413 aa16.79■□□□□ 0.28
SEC22C-208ENST00000445388 RNF168Q8IYW5 571 aaPredicted RBP16.79■□□□□ 0.28
SEC22C-208ENST00000445388 SMRP1Q8NCR6 262 aa16.79■□□□□ 0.28
SEC22C-208ENST00000445388 B3GALT6Q96L58 329 aa16.79■□□□□ 0.28
SEC22C-208ENST00000445388 GPR62Q9BZJ7 368 aa16.79■□□□□ 0.28
SEC22C-208ENST00000445388 HAPLN2Q9GZV7 340 aa16.79■□□□□ 0.28
SEC22C-208ENST00000445388 PARVGQ9HBI0 331 aa16.79■□□□□ 0.28
SEC22C-208ENST00000445388 STK17AQ9UEE5 414 aa16.79■□□□□ 0.28
SEC22C-208ENST00000445388 KCNG1Q9UIX4 513 aa16.79■□□□□ 0.28
SEC22C-208ENST00000445388 HCFC2Q9Y5Z7 792 aa16.79■□□□□ 0.28
SEC22C-208ENST00000445388 IRAK3Q9Y616 596 aa16.79■□□□□ 0.28
SEC22C-208ENST00000445388 MYH15Q9Y2K3 1946 aa16.78■□□□□ 0.28
SEC22C-208ENST00000445388 MYMKA6NI61 221 aa16.78■□□□□ 0.28
SEC22C-208ENST00000445388 MEFVO15553 781 aaPredicted RBP16.78■□□□□ 0.28
SEC22C-208ENST00000445388 TRAK2O60296 914 aa16.78■□□□□ 0.28
SEC22C-208ENST00000445388 PPP6R2O75170 966 aa16.78■□□□□ 0.28
SEC22C-208ENST00000445388 SOD2P04179 222 aa16.78■□□□□ 0.28
SEC22C-208ENST00000445388 MCF2P10911 925 aa16.78■□□□□ 0.28
SEC22C-208ENST00000445388 IGFBP6P24592 240 aaPredicted RBP16.78■□□□□ 0.28
SEC22C-208ENST00000445388 NMT1P30419 496 aaKnown RBP16.78■□□□□ 0.28
SEC22C-208ENST00000445388 TXLNAP40222 546 aa16.78■□□□□ 0.28
SEC22C-208ENST00000445388 SYCE2Q6PIF2 218 aa16.78■□□□□ 0.28
SEC22C-208ENST00000445388 APBB1IPQ7Z5R6 666 aaPredicted RBP16.78■□□□□ 0.28
SEC22C-208ENST00000445388 PDILTQ8N807 584 aa16.78■□□□□ 0.28
SEC22C-208ENST00000445388 HASPINQ8TF76 798 aa16.78■□□□□ 0.28
SEC22C-208ENST00000445388 KHSRPQ92945 711 aaKnown RBP eCLIP16.78■□□□□ 0.28
SEC22C-208ENST00000445388 KLHL5Q96PQ7 755 aa16.78■□□□□ 0.28
SEC22C-208ENST00000445388 FIZ1Q96SL8 496 aa16.78■□□□□ 0.28
SEC22C-208ENST00000445388 HERC2P3Q9BVR0 1158 aa16.78■□□□□ 0.28
SEC22C-208ENST00000445388 CCDC94Q9BW85 323 aaPredicted RBP16.78■□□□□ 0.28
SEC22C-208ENST00000445388 S1PR5Q9H228 398 aa16.78■□□□□ 0.28
SEC22C-208ENST00000445388 ANKFY1Q9P2R3 1169 aa16.78■□□□□ 0.28
SEC22C-208ENST00000445388 FSD2A1L4K1 749 aa16.77■□□□□ 0.28
SEC22C-208ENST00000445388 K7ENM7 598 aa16.77■□□□□ 0.28
SEC22C-208ENST00000445388 TBCAO75347 108 aaKnown RBP16.77■□□□□ 0.28
SEC22C-208ENST00000445388 TOM1L1O75674 476 aa16.77■□□□□ 0.28
SEC22C-208ENST00000445388 BRD1O95696 1058 aa16.77■□□□□ 0.28
SEC22C-208ENST00000445388 CNPP09543 421 aaKnown RBP16.77■□□□□ 0.28
SEC22C-208ENST00000445388 EPCAMP16422 314 aa16.77■□□□□ 0.28
SEC22C-208ENST00000445388 HSP90AA2PQ14568 343 aaPredicted RBP16.77■□□□□ 0.28
SEC22C-208ENST00000445388 KANK3Q6NY19 840 aa16.77■□□□□ 0.28
SEC22C-208ENST00000445388 FUT10Q6P4F1 479 aa16.77■□□□□ 0.28
SEC22C-208ENST00000445388 ALKAL1Q6UXT8 129 aa16.77■□□□□ 0.28
SEC22C-208ENST00000445388 SV2BQ7L1I2 683 aa16.77■□□□□ 0.28
SEC22C-208ENST00000445388 TMEM87AQ8NBN3 555 aa16.77■□□□□ 0.28
SEC22C-208ENST00000445388 SLC22A17Q8WUG5 538 aa16.77■□□□□ 0.28
SEC22C-208ENST00000445388 DDX12PQ92771 950 aa16.77■□□□□ 0.28
SEC22C-208ENST00000445388 PPP1R10Q96QC0 940 aaKnown RBP16.77■□□□□ 0.28
SEC22C-208ENST00000445388 MRPL17Q9NRX2 175 aaKnown RBP16.77■□□□□ 0.28
SEC22C-208ENST00000445388 CDH22Q9UJ99 828 aa16.77■□□□□ 0.28
SEC22C-208ENST00000445388 ADAM28Q9UKQ2 775 aa16.77■□□□□ 0.28
SEC22C-208ENST00000445388 TBX20Q9UMR3 447 aa16.77■□□□□ 0.28
SEC22C-208ENST00000445388 FAM50BQ9Y247 325 aa16.77■□□□□ 0.28
SEC22C-208ENST00000445388 USP15Q9Y4E8 981 aaPredicted RBP16.77■□□□□ 0.28
SEC22C-208ENST00000445388 SMIM28A0A1B0GU29 152 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms