RNA–Protein interactions for RNA: ENST00000444746.6

RIF1-205, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 7,897 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-205ENST00000444746 PDHA1P08559 390 aa8.49□□□□□ -1.05
RIF1-205ENST00000444746 UCHL3P15374 230 aa8.49□□□□□ -1.05
RIF1-205ENST00000444746 ERVK-24P63145 666 aa8.49□□□□□ -1.05
RIF1-205ENST00000444746 SPATA4Q8NEY3 305 aa8.49□□□□□ -1.05
RIF1-205ENST00000444746 ATG4AQ8WYN0 398 aa8.49□□□□□ -1.05
RIF1-205ENST00000444746 FAM136AQ96C01 138 aa8.49□□□□□ -1.05
RIF1-205ENST00000444746 KCNH7Q9NS40 1196 aa8.49□□□□□ -1.05
RIF1-205ENST00000444746 SCINQ9Y6U3 715 aa8.49□□□□□ -1.05
RIF1-205ENST00000444746 GTF2H1P32780 548 aa8.49□□□□□ -1.05
RIF1-205ENST00000444746 PSMC6P62333 389 aa8.49□□□□□ -1.05
RIF1-205ENST00000444746 OCRLQ01968 901 aa8.49□□□□□ -1.05
RIF1-205ENST00000444746 TERF2Q15554 542 aa8.49□□□□□ -1.05
RIF1-205ENST00000444746 RASIP1Q5U651 963 aa8.49□□□□□ -1.05
RIF1-205ENST00000444746 RGS9BPQ6ZS82 235 aa8.49□□□□□ -1.05
RIF1-205ENST00000444746 RBBP8NLQ8NC74 664 aaPredicted RBP8.49□□□□□ -1.05
RIF1-205ENST00000444746 FBXL13Q8NEE6 735 aa8.49□□□□□ -1.05
RIF1-205ENST00000444746 MCPH1Q8NEM0 835 aa8.49□□□□□ -1.05
RIF1-205ENST00000444746 MDM1Q8TC05 714 aa8.49□□□□□ -1.05
RIF1-205ENST00000444746 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.49□□□□□ -1.056e-7■■■□□ 16.7
RIF1-205ENST00000444746 TARS2Q9BW92 718 aaKnown RBP8.49□□□□□ -1.05
RIF1-205ENST00000444746 FSD1LQ9BXM9 530 aa8.49□□□□□ -1.05
RIF1-205ENST00000444746 KRT82Q9NSB4 513 aa8.49□□□□□ -1.05
RIF1-205ENST00000444746 VTNP04004 478 aa8.49□□□□□ -1.05
RIF1-205ENST00000444746 NR1I3Q14994 352 aa8.49□□□□□ -1.05
RIF1-205ENST00000444746 BPIFA3Q9BQP9 254 aa8.49□□□□□ -1.05
RIF1-205ENST00000444746 IPO11Q9UI26 975 aaKnown RBP8.49□□□□□ -1.05
RIF1-205ENST00000444746 A0A1B0GTH6 734 aa8.49□□□□□ -1.05
RIF1-205ENST00000444746 SPTLC1O15269 473 aa8.49□□□□□ -1.05
RIF1-205ENST00000444746 RAD51CO43502 376 aa8.49□□□□□ -1.05
RIF1-205ENST00000444746 KLRC1P26715 233 aa8.49□□□□□ -1.05
RIF1-205ENST00000444746 ATICP31939 592 aa8.49□□□□□ -1.05
RIF1-205ENST00000444746 CARSP49589 748 aaKnown RBP8.49□□□□□ -1.05
RIF1-205ENST00000444746 ROR1Q01973 937 aa8.49□□□□□ -1.05
RIF1-205ENST00000444746 ART3Q13508 389 aa8.49□□□□□ -1.05
RIF1-205ENST00000444746 SNRNP35Q16560 246 aaKnown RBP8.49□□□□□ -1.05
RIF1-205ENST00000444746 P3H1Q32P28 736 aa8.49□□□□□ -1.05
RIF1-205ENST00000444746 KCNT1Q5JUK3 1230 aa8.49□□□□□ -1.05
RIF1-205ENST00000444746 PDLIM2Q96JY6 352 aa8.49□□□□□ -1.05
RIF1-205ENST00000444746 RUNDC3BQ96NL0 473 aa8.49□□□□□ -1.05
RIF1-205ENST00000444746 METTL5Q9NRN9 209 aaKnown RBP8.49□□□□□ -1.05
RIF1-205ENST00000444746 GNL1P36915 607 aaPredicted RBP8.49□□□□□ -1.05
RIF1-205ENST00000444746 ARL4CP56559 192 aa8.49□□□□□ -1.05
RIF1-205ENST00000444746 EIF3EP60228 445 aaKnown RBP8.49□□□□□ -1.05
RIF1-205ENST00000444746 TSGA10IPQ3SY00 556 aa8.49□□□□□ -1.05
RIF1-205ENST00000444746 NAALADL2Q58DX5 795 aa8.49□□□□□ -1.05
RIF1-205ENST00000444746 EFCAB12Q6NXP0 572 aa8.49□□□□□ -1.05
RIF1-205ENST00000444746 FAM84AQ96KN4 292 aa8.49□□□□□ -1.05
RIF1-205ENST00000444746 PNMA2Q9UL42 364 aa8.49□□□□□ -1.05
RIF1-205ENST00000444746 TET3O43151 1660 aa8.49□□□□□ -1.05
RIF1-205ENST00000444746 SRGNP10124 158 aa8.48□□□□□ -1.05
RIF1-205ENST00000444746 VEGFAP15692 232 aaPredicted RBP8.48□□□□□ -1.05
RIF1-205ENST00000444746 POLE2P56282 527 aa8.48□□□□□ -1.05
RIF1-205ENST00000444746 NBPF12Q5TAG4 269 aaPredicted RBP8.48□□□□□ -1.05
RIF1-205ENST00000444746 STRIP1Q5VSL9 837 aa8.48□□□□□ -1.05
RIF1-205ENST00000444746 DHX38Q92620 1227 aaKnown RBP8.48□□□□□ -1.05
RIF1-205ENST00000444746 ACAP3Q96P50 834 aa8.48□□□□□ -1.05
RIF1-205ENST00000444746 GCOM2Q9BZD3 368 aaPredicted RBP8.48□□□□□ -1.05
RIF1-205ENST00000444746 NFIBO00712 420 aa8.48□□□□□ -1.05
RIF1-205ENST00000444746 DIAPH2O60879 1101 aa8.48□□□□□ -1.05
RIF1-205ENST00000444746 GUCY2CP25092 1073 aa8.48□□□□□ -1.05
RIF1-205ENST00000444746 ALDH18A1P54886 795 aaKnown RBP8.48□□□□□ -1.05
RIF1-205ENST00000444746 CSE1LP55060 971 aaKnown RBP8.48□□□□□ -1.05
RIF1-205ENST00000444746 VPS72Q15906 364 aa8.48□□□□□ -1.05
RIF1-205ENST00000444746 SLC17A8Q8NDX2 589 aa8.48□□□□□ -1.05
RIF1-205ENST00000444746 CXorf38Q8TB03 319 aa8.48□□□□□ -1.05
RIF1-205ENST00000444746 VCXQ9H320 206 aa8.48□□□□□ -1.05
RIF1-205ENST00000444746 VCPKMTQ9H867 229 aa8.48□□□□□ -1.05
RIF1-205ENST00000444746 USP42Q9H9J4 1324 aaKnown RBP8.48□□□□□ -1.05
RIF1-205ENST00000444746 ENDOD1O94919 500 aa8.48□□□□□ -1.05
RIF1-205ENST00000444746 HLA-DRAP01903 254 aa8.48□□□□□ -1.05
RIF1-205ENST00000444746 KRT3P12035 628 aa8.48□□□□□ -1.05
RIF1-205ENST00000444746 GYS1P13807 737 aa8.48□□□□□ -1.05
RIF1-205ENST00000444746 FMO5P49326 533 aa8.48□□□□□ -1.05
RIF1-205ENST00000444746 USP11P51784 963 aa8.48□□□□□ -1.05
RIF1-205ENST00000444746 TAF1CQ15572 869 aaPredicted RBP8.48□□□□□ -1.05
RIF1-205ENST00000444746 THEM5Q8N1Q8 247 aa8.48□□□□□ -1.05
RIF1-205ENST00000444746 ZNF280CQ8ND82 737 aa8.48□□□□□ -1.05
RIF1-205ENST00000444746 SPZ1Q9BXG8 430 aa8.48□□□□□ -1.05
RIF1-205ENST00000444746 KLC2Q9H0B6 622 aa8.48□□□□□ -1.05
RIF1-205ENST00000444746 THAP2Q9H0W7 228 aa8.48□□□□□ -1.05
RIF1-205ENST00000444746 ECT2Q9H8V3 914 aa8.48□□□□□ -1.05
RIF1-205ENST00000444746 KIF1BO60333 1816 aa8.48□□□□□ -1.05
RIF1-205ENST00000444746 SPATA31A5Q5VU36 1347 aa8.48□□□□□ -1.05
RIF1-205ENST00000444746 SPATA31A7Q8IWB4 1347 aa8.48□□□□□ -1.05
RIF1-205ENST00000444746 IQGAP3Q86VI3 1631 aa8.48□□□□□ -1.05
RIF1-205ENST00000444746 QRICH2Q9H0J4 1663 aa8.48□□□□□ -1.05
RIF1-205ENST00000444746 COMTP21964 271 aa8.48□□□□□ -1.05
RIF1-205ENST00000444746 BCAR1P56945 870 aa8.48□□□□□ -1.05
RIF1-205ENST00000444746 RPS6P62753 249 aaKnown RBP8.48□□□□□ -1.05
RIF1-205ENST00000444746 NLRP14Q86W24 1093 aa8.48□□□□□ -1.05
RIF1-205ENST00000444746 TGS1Q96RS0 853 aaKnown RBP8.48□□□□□ -1.05
RIF1-205ENST00000444746 MAP3K14Q99558 947 aa8.48□□□□□ -1.05
RIF1-205ENST00000444746 CFAP69A5D8W1 941 aa8.48□□□□□ -1.05
RIF1-205ENST00000444746 TISP43B9A030 160 aa8.48□□□□□ -1.05
RIF1-205ENST00000444746 CELF2O95319 508 aaKnown RBP8.48□□□□□ -1.05
RIF1-205ENST00000444746 TCF7P36402 384 aaPredicted RBP8.48□□□□□ -1.05
RIF1-205ENST00000444746 CLCN3P51790 818 aa8.48□□□□□ -1.05
RIF1-205ENST00000444746 LRRC36Q1X8D7 754 aa8.48□□□□□ -1.05
RIF1-205ENST00000444746 GRAMD1BQ3KR37 738 aa8.48□□□□□ -1.05
RIF1-205ENST00000444746 ARL13BQ3SXY8 428 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms