RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 KLRC4O43908 158 aa15.38■□□□□ 0.05
SSBP3-208ENST00000444533 ZC3H11AO75152 810 aaKnown RBP eCLIP15.38■□□□□ 0.05
SSBP3-208ENST00000444533 MBD3O95983 291 aa15.38■□□□□ 0.05
SSBP3-208ENST00000444533 POMCP01189 267 aa15.38■□□□□ 0.05
SSBP3-208ENST00000444533 THP07101 528 aa15.38■□□□□ 0.05
SSBP3-208ENST00000444533 GARTP22102 1010 aa15.38■□□□□ 0.05
SSBP3-208ENST00000444533 PPP1R2P41236 205 aa15.38■□□□□ 0.05
SSBP3-208ENST00000444533 ERVK-21P61565 698 aa15.38■□□□□ 0.05
SSBP3-208ENST00000444533 KRT17Q04695 432 aa15.38■□□□□ 0.05
SSBP3-208ENST00000444533 PPP2R3AQ06190 1150 aa15.38■□□□□ 0.05
SSBP3-208ENST00000444533 EHHADHQ08426 723 aa15.38■□□□□ 0.05
SSBP3-208ENST00000444533 GRIK3Q13003 919 aa15.38■□□□□ 0.05
SSBP3-208ENST00000444533 BMS1Q14692 1282 aaKnown RBP15.38■□□□□ 0.05
SSBP3-208ENST00000444533 KNOP1Q1ED39 458 aaKnown RBP15.38■□□□□ 0.05
SSBP3-208ENST00000444533 NELFCDQ8IXH7 590 aa15.38■□□□□ 0.05
SSBP3-208ENST00000444533 NOC3LQ8WTT2 800 aaKnown RBP15.38■□□□□ 0.05
SSBP3-208ENST00000444533 CLP1Q92989 425 aaKnown RBP15.38■□□□□ 0.05
SSBP3-208ENST00000444533 ZBTB45Q96K62 511 aaPredicted RBP15.38■□□□□ 0.05
SSBP3-208ENST00000444533 ZNF558Q96NG5 402 aa15.38■□□□□ 0.05
SSBP3-208ENST00000444533 SEMA6BQ9H3T3 888 aa15.38■□□□□ 0.05
SSBP3-208ENST00000444533 PLEKHA5Q9HAU0 1116 aa15.38■□□□□ 0.05
SSBP3-208ENST00000444533 RC3H2Q9HBD1 1191 aaKnown RBP15.38■□□□□ 0.05
SSBP3-208ENST00000444533 SLC38A7Q9NVC3 462 aa15.38■□□□□ 0.05
SSBP3-208ENST00000444533 KLK14Q9P0G3 267 aa15.38■□□□□ 0.05
SSBP3-208ENST00000444533 MRPL42Q9Y6G3 142 aaKnown RBP15.38■□□□□ 0.05
SSBP3-208ENST00000444533 COL4A6Q14031 1691 aa15.38■□□□□ 0.05
SSBP3-208ENST00000444533 RBAK-RBAKDNI3L0D1 243 aa15.37■□□□□ 0.05
SSBP3-208ENST00000444533 XPOTO43592 962 aaKnown RBP15.37■□□□□ 0.05
SSBP3-208ENST00000444533 ALDH2P05091 517 aa15.37■□□□□ 0.05
SSBP3-208ENST00000444533 BMPR1AP36894 532 aa15.37■□□□□ 0.05
SSBP3-208ENST00000444533 PTPROQ16827 1216 aa15.37■□□□□ 0.05
SSBP3-208ENST00000444533 EPC2Q52LR7 807 aa15.37■□□□□ 0.05
SSBP3-208ENST00000444533 EPM2AIP1Q7L775 607 aaPredicted RBP15.37■□□□□ 0.05
SSBP3-208ENST00000444533 CD302Q8IX05 232 aa15.37■□□□□ 0.05
SSBP3-208ENST00000444533 FAM161BQ96MY7 647 aa15.37■□□□□ 0.05
SSBP3-208ENST00000444533 RNF39Q9H2S5 420 aa15.37■□□□□ 0.05
SSBP3-208ENST00000444533 CERS4Q9HA82 394 aa15.37■□□□□ 0.05
SSBP3-208ENST00000444533 KIAA1586Q9HCI6 787 aa15.37■□□□□ 0.05
SSBP3-208ENST00000444533 LMBRD1Q9NUN5 540 aa15.37■□□□□ 0.05
SSBP3-208ENST00000444533 TBC1D13Q9NVG8 400 aa15.37■□□□□ 0.05
SSBP3-208ENST00000444533 STK39Q9UEW8 545 aa15.37■□□□□ 0.05
SSBP3-208ENST00000444533 PUF60Q9UHX1 559 aaKnown RBP15.37■□□□□ 0.05
SSBP3-208ENST00000444533 PCDHA5Q9Y5H7 936 aa15.37■□□□□ 0.05
SSBP3-208ENST00000444533 PTPRSQ13332 1948 aa15.37■□□□□ 0.05
SSBP3-208ENST00000444533 MEIS3P2A8K0S8 358 aa15.36■□□□□ 0.05
SSBP3-208ENST00000444533 ANKRD63C9JTQ0 380 aa15.36■□□□□ 0.05
SSBP3-208ENST00000444533 CALUO43852 315 aaPredicted RBP15.36■□□□□ 0.05
SSBP3-208ENST00000444533 SCNN1GP51170 649 aa15.36■□□□□ 0.05
SSBP3-208ENST00000444533 KCNA1Q09470 495 aa15.36■□□□□ 0.05
SSBP3-208ENST00000444533 STK4Q13043 487 aa15.36■□□□□ 0.05
SSBP3-208ENST00000444533 BMT2Q1RMZ1 405 aa15.36■□□□□ 0.05
SSBP3-208ENST00000444533 ZNF658Q5TYW1 1059 aaPredicted RBP15.36■□□□□ 0.05
SSBP3-208ENST00000444533 SCFD1Q8WVM8 642 aa15.36■□□□□ 0.05
SSBP3-208ENST00000444533 P2RX5Q93086 422 aa15.36■□□□□ 0.05
SSBP3-208ENST00000444533 FAM212AQ96EL1 285 aa15.36■□□□□ 0.05
SSBP3-208ENST00000444533 ZFP42Q96MM3 310 aa15.36■□□□□ 0.05
SSBP3-208ENST00000444533 TSPAN18Q96SJ8 248 aa15.36■□□□□ 0.05
SSBP3-208ENST00000444533 TMEM175Q9BSA9 504 aa15.36■□□□□ 0.05
SSBP3-208ENST00000444533 C17orf80Q9BSJ5 609 aa15.36■□□□□ 0.05
SSBP3-208ENST00000444533 NUP62CLQ9H1M0 184 aa15.36■□□□□ 0.05
SSBP3-208ENST00000444533 RNF19AQ9NV58 838 aa15.36■□□□□ 0.05
SSBP3-208ENST00000444533 STYXL1Q9Y6J8 313 aa15.36■□□□□ 0.05
SSBP3-208ENST00000444533 GBF1Q92538 1859 aa15.35■□□□□ 0.05
SSBP3-208ENST00000444533 ABLIM1O14639 778 aa15.35■□□□□ 0.05
SSBP3-208ENST00000444533 INPPL1O15357 1258 aa15.35■□□□□ 0.05
SSBP3-208ENST00000444533 OR1G1P47890 313 aa15.35■□□□□ 0.05
SSBP3-208ENST00000444533 POU5F1Q01860 360 aaKnown RBP15.35■□□□□ 0.05
SSBP3-208ENST00000444533 CAMK4Q16566 473 aa15.35■□□□□ 0.05
SSBP3-208ENST00000444533 KCNT2Q6UVM3 1135 aa15.35■□□□□ 0.05
SSBP3-208ENST00000444533 GUF1Q8N442 669 aaKnown RBP15.35■□□□□ 0.05
SSBP3-208ENST00000444533 CEP120Q8N960 986 aa15.35■□□□□ 0.05
SSBP3-208ENST00000444533 COLGALT1Q8NBJ5 622 aa15.35■□□□□ 0.05
SSBP3-208ENST00000444533 TMEM169Q96HH4 297 aa15.35■□□□□ 0.05
SSBP3-208ENST00000444533 TSG101Q99816 390 aa15.35■□□□□ 0.05
SSBP3-208ENST00000444533 FAM213AQ9BRX8 229 aa15.35■□□□□ 0.05
SSBP3-208ENST00000444533 COLEC11Q9BWP8 271 aa15.35■□□□□ 0.05
SSBP3-208ENST00000444533 FGFBP2Q9BYJ0 223 aa15.35■□□□□ 0.05
SSBP3-208ENST00000444533 SPG21Q9NZD8 308 aa15.35■□□□□ 0.05
SSBP3-208ENST00000444533 FAN1Q9Y2M0 1017 aa15.35■□□□□ 0.05
SSBP3-208ENST00000444533 ZNF233A6NK53 670 aa15.34■□□□□ 0.05
SSBP3-208ENST00000444533 C5orf67F2Z3F1 127 aa15.34■□□□□ 0.05
SSBP3-208ENST00000444533 PSMA7O14818 248 aa15.34■□□□□ 0.05
SSBP3-208ENST00000444533 EXTL3O43909 919 aa15.34■□□□□ 0.05
SSBP3-208ENST00000444533 IL18RAPO95256 599 aa15.34■□□□□ 0.05
SSBP3-208ENST00000444533 CXCL8P10145 99 aa15.34■□□□□ 0.05
SSBP3-208ENST00000444533 RPL13P26373 211 aaKnown RBP15.34■□□□□ 0.05
SSBP3-208ENST00000444533 ACOT2P49753 483 aa15.34■□□□□ 0.05
SSBP3-208ENST00000444533 BCAR1P56945 870 aa15.34■□□□□ 0.05
SSBP3-208ENST00000444533 TUSC3Q13454 348 aa15.34■□□□□ 0.05
SSBP3-208ENST00000444533 GPM6BQ13491 265 aa15.34■□□□□ 0.05
SSBP3-208ENST00000444533 SEZ6Q53EL9 994 aa15.34■□□□□ 0.05
SSBP3-208ENST00000444533 SLC39A4Q6P5W5 647 aa15.34■□□□□ 0.05
SSBP3-208ENST00000444533 GPD1LQ8N335 351 aa15.34■□□□□ 0.05
SSBP3-208ENST00000444533 TRIML1Q8N9V2 468 aa15.34■□□□□ 0.05
SSBP3-208ENST00000444533 KIAA0895Q8NCT3 520 aa15.34■□□□□ 0.05
SSBP3-208ENST00000444533 GLIS3Q8NEA6 775 aa15.34■□□□□ 0.05
SSBP3-208ENST00000444533 SYAP1Q96A49 352 aaPredicted RBP15.34■□□□□ 0.05
SSBP3-208ENST00000444533 SNX27Q96L92 541 aa15.34■□□□□ 0.05
SSBP3-208ENST00000444533 UROC1Q96N76 676 aa15.34■□□□□ 0.05
SSBP3-208ENST00000444533 TTYH1Q9H313 450 aaPredicted RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms