RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 NAA25Q14CX7 972 aa4.3□□□□□ -1.72
UBR3-206ENST00000444475 TTC19Q6DKK2 380 aaPredicted RBP4.3□□□□□ -1.72
UBR3-206ENST00000444475 TMTC3Q6ZXV5 915 aa4.3□□□□□ -1.72
UBR3-206ENST00000444475 RAB11FIP2Q7L804 512 aa4.3□□□□□ -1.72
UBR3-206ENST00000444475 CCDC91Q7Z6B0 441 aa4.3□□□□□ -1.72
UBR3-206ENST00000444475 GRAMD1CQ8IYS0 662 aa4.3□□□□□ -1.72
UBR3-206ENST00000444475 MFSD2AQ8NA29 543 aa4.3□□□□□ -1.72
UBR3-206ENST00000444475 ZBTB8BQ8NAP8 495 aaPredicted RBP4.3□□□□□ -1.72
UBR3-206ENST00000444475 SUPT20HQ8NEM7 779 aa4.3□□□□□ -1.72
UBR3-206ENST00000444475 EXOC4Q96A65 974 aa4.3□□□□□ -1.72
UBR3-206ENST00000444475 CDCA5Q96FF9 252 aa4.3□□□□□ -1.72
UBR3-206ENST00000444475 PDLIM5Q96HC4 596 aaKnown RBP4.3□□□□□ -1.72
UBR3-206ENST00000444475 AK8Q96MA6 479 aa4.3□□□□□ -1.72
UBR3-206ENST00000444475 GDF15Q99988 308 aa4.3□□□□□ -1.72
UBR3-206ENST00000444475 MXD3Q9BW11 206 aa4.3□□□□□ -1.72
UBR3-206ENST00000444475 GBP3Q9H0R5 595 aa4.3□□□□□ -1.72
UBR3-206ENST00000444475 CCDC151A5D8V7 595 aa4.3□□□□□ -1.72
UBR3-206ENST00000444475 RHPN2P1A8MT19 583 aa4.3□□□□□ -1.72
UBR3-206ENST00000444475 H7BY64 318 aa4.3□□□□□ -1.72
UBR3-206ENST00000444475 L7N2F9 121 aa4.3□□□□□ -1.72
UBR3-206ENST00000444475 SGK1O00141 431 aa4.3□□□□□ -1.72
UBR3-206ENST00000444475 FYB1O15117 783 aa4.3□□□□□ -1.72
UBR3-206ENST00000444475 SCGB1D1O95968 90 aa4.3□□□□□ -1.72
UBR3-206ENST00000444475 ALDH2P05091 517 aa4.3□□□□□ -1.72
UBR3-206ENST00000444475 PCNAP12004 261 aa4.3□□□□□ -1.72
UBR3-206ENST00000444475 ATP2A2P16615 1042 aaKnown RBP4.3□□□□□ -1.72
UBR3-206ENST00000444475 RHOQP17081 205 aa4.3□□□□□ -1.72
UBR3-206ENST00000444475 TGM1P22735 817 aa4.3□□□□□ -1.72
UBR3-206ENST00000444475 RGS2P41220 211 aa4.3□□□□□ -1.72
UBR3-206ENST00000444475 CCT4P50991 539 aaKnown RBP4.3□□□□□ -1.72
UBR3-206ENST00000444475 MXD4Q14582 209 aaPredicted RBP4.3□□□□□ -1.72
UBR3-206ENST00000444475 PUM1Q14671 1186 aaKnown RBP eCLIP4.3□□□□□ -1.72
UBR3-206ENST00000444475 STARD3Q14849 445 aa4.3□□□□□ -1.72
UBR3-206ENST00000444475 ZSCAN26Q16670 478 aa4.3□□□□□ -1.72
UBR3-206ENST00000444475 DCAF17Q5H9S7 520 aaPredicted RBP4.3□□□□□ -1.72
UBR3-206ENST00000444475 NBPF12Q5TAG4 269 aaPredicted RBP4.3□□□□□ -1.72
UBR3-206ENST00000444475 NAA16Q6N069 864 aaPredicted RBP4.3□□□□□ -1.72
UBR3-206ENST00000444475 KRT25Q7Z3Z0 450 aa4.3□□□□□ -1.72
UBR3-206ENST00000444475 ZNF227Q86WZ6 799 aa4.3□□□□□ -1.72
UBR3-206ENST00000444475 TMEM57Q8N5G2 664 aa4.3□□□□□ -1.72
UBR3-206ENST00000444475 KCTD6Q8NC69 237 aa4.3□□□□□ -1.72
UBR3-206ENST00000444475 OR52K1Q8NGK4 314 aa4.3□□□□□ -1.72
UBR3-206ENST00000444475 PTPRN2Q92932 1015 aa4.3□□□□□ -1.72
UBR3-206ENST00000444475 KLRG1Q96E93 195 aa4.3□□□□□ -1.72
UBR3-206ENST00000444475 KCNC2Q96PR1 638 aa4.3□□□□□ -1.72
UBR3-206ENST00000444475 PYM1Q9BRP8 204 aaKnown RBP4.3□□□□□ -1.72
UBR3-206ENST00000444475 CCDC106Q9BWC9 280 aa4.3□□□□□ -1.72
UBR3-206ENST00000444475 STRA6Q9BX79 667 aa4.3□□□□□ -1.72
UBR3-206ENST00000444475 CD244Q9BZW8 370 aa4.3□□□□□ -1.72
UBR3-206ENST00000444475 CEP44Q9C0F1 390 aa4.3□□□□□ -1.72
UBR3-206ENST00000444475 REXO4Q9GZR2 422 aaKnown RBP4.3□□□□□ -1.72
UBR3-206ENST00000444475 EHD4Q9H223 541 aa4.3□□□□□ -1.72
UBR3-206ENST00000444475 HSD3B7Q9H2F3 369 aa4.3□□□□□ -1.72
UBR3-206ENST00000444475 CCM2LQ9NUG4 571 aaPredicted RBP4.3□□□□□ -1.72
UBR3-206ENST00000444475 COL15A1P39059 1388 aa4.3□□□□□ -1.72
UBR3-206ENST00000444475 ABCC10Q5T3U5 1492 aa4.3□□□□□ -1.72
UBR3-206ENST00000444475 CAPN8A6NHC0 703 aa4.3□□□□□ -1.72
UBR3-206ENST00000444475 LGALS16A8MUM7 142 aa4.3□□□□□ -1.72
UBR3-206ENST00000444475 IKBKBO14920 756 aa4.3□□□□□ -1.72
UBR3-206ENST00000444475 ACTN4O43707 911 aaKnown RBP4.3□□□□□ -1.72
UBR3-206ENST00000444475 CEP104O60308 925 aa4.3□□□□□ -1.72
UBR3-206ENST00000444475 DNAJA2O60884 412 aa4.3□□□□□ -1.72
UBR3-206ENST00000444475 ALDH1A2O94788 518 aa4.3□□□□□ -1.72
UBR3-206ENST00000444475 ITGAVP06756 1048 aa4.3□□□□□ -1.72
UBR3-206ENST00000444475 TOP1P11387 765 aaKnown RBP4.3□□□□□ -1.72
UBR3-206ENST00000444475 HLA-DPA1P20036 260 aa4.3□□□□□ -1.72
UBR3-206ENST00000444475 ITPKAP23677 461 aa4.3□□□□□ -1.72
UBR3-206ENST00000444475 MAPK7Q13164 816 aa4.3□□□□□ -1.72
UBR3-206ENST00000444475 PTCRAQ6ISU1 281 aaPredicted RBP4.3□□□□□ -1.72
UBR3-206ENST00000444475 NSMFQ6X4W1 530 aa4.3□□□□□ -1.72
UBR3-206ENST00000444475 GBP6Q6ZN66 633 aa4.3□□□□□ -1.72
UBR3-206ENST00000444475 UBE2R2Q712K3 238 aaPredicted RBP4.3□□□□□ -1.72
UBR3-206ENST00000444475 BNIPLQ7Z465 357 aa4.3□□□□□ -1.72
UBR3-206ENST00000444475 SPATA24Q86W54 205 aa4.3□□□□□ -1.72
UBR3-206ENST00000444475 FAM217AQ8IXS0 508 aa4.3□□□□□ -1.72
UBR3-206ENST00000444475 ZUFSPQ96AP4 578 aa4.3□□□□□ -1.72
UBR3-206ENST00000444475 CARD14Q9BXL6 1004 aa4.3□□□□□ -1.72
UBR3-206ENST00000444475 RNPEPQ9H4A4 650 aa4.3□□□□□ -1.72
UBR3-206ENST00000444475 NOL6Q9H6R4 1146 aaKnown RBP4.3□□□□□ -1.72
UBR3-206ENST00000444475 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.3□□□□□ -1.72
UBR3-206ENST00000444475 TUBD1Q9UJT1 453 aa4.3□□□□□ -1.72
UBR3-206ENST00000444475 EDARQ9UNE0 448 aa4.3□□□□□ -1.72
UBR3-206ENST00000444475 EXOC7Q9UPT5 735 aa4.3□□□□□ -1.72
UBR3-206ENST00000444475 MAP3K19Q56UN5 1328 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 CLRN2A0PK11 232 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 B4E1Z4 1266 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 DLX3O60479 287 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 ITGB1P05556 798 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 RARBP10826 455 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 PLCG1P19174 1290 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 KCNA5P22460 613 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 PSMC4P43686 418 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 ARCN1P48444 511 aaKnown RBP4.29□□□□□ -1.72
UBR3-206ENST00000444475 MAPK10P53779 464 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 CREB5Q02930 508 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 FRG1Q14331 258 aaKnown RBP4.29□□□□□ -1.72
UBR3-206ENST00000444475 PROX2Q3B8N5 592 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 ACAD10Q6JQN1 1059 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 MAEAQ7L5Y9 396 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 PDCL2Q8N4E4 241 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms