RNA–Protein interactions for RNA: ENST00000442653.1

TOP3B-209, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 400 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-209ENST00000442653 BTBD18B2RXH4 712 aa9.25□□□□□ -0.93
TOP3B-209ENST00000442653 NEMFO60524 1076 aa9.25□□□□□ -0.93
TOP3B-209ENST00000442653 USO1O60763 962 aaKnown RBP9.25□□□□□ -0.93
TOP3B-209ENST00000442653 NR1I2O75469 434 aa9.25□□□□□ -0.93
TOP3B-209ENST00000442653 BAG4O95429 457 aaKnown RBP9.25□□□□□ -0.93
TOP3B-209ENST00000442653 SPATA31C1P0DKV0 1188 aa9.25□□□□□ -0.93
TOP3B-209ENST00000442653 LAMP2P13473 410 aa9.25□□□□□ -0.93
TOP3B-209ENST00000442653 TXKP42681 527 aa9.25□□□□□ -0.93
TOP3B-209ENST00000442653 NCBP1Q09161 790 aaKnown RBP9.25□□□□□ -0.93
TOP3B-209ENST00000442653 GRIK3Q13003 919 aa9.25□□□□□ -0.93
TOP3B-209ENST00000442653 HTR4Q13639 388 aa9.25□□□□□ -0.93
TOP3B-209ENST00000442653 USP41Q3LFD5 358 aa9.25□□□□□ -0.93
TOP3B-209ENST00000442653 RTP2Q5QGT7 225 aa9.25□□□□□ -0.93
TOP3B-209ENST00000442653 SLC27A1Q6PCB7 646 aa9.25□□□□□ -0.93
TOP3B-209ENST00000442653 ELMSAN1Q6PJG2 1045 aa9.25□□□□□ -0.93
TOP3B-209ENST00000442653 PRSS55Q6UWB4 352 aaPredicted RBP9.25□□□□□ -0.93
TOP3B-209ENST00000442653 CYP26C1Q6V0L0 522 aa9.25□□□□□ -0.93
TOP3B-209ENST00000442653 GET4Q7L5D6 327 aaPredicted RBP9.25□□□□□ -0.93
TOP3B-209ENST00000442653 MAEAQ7L5Y9 396 aa9.25□□□□□ -0.93
TOP3B-209ENST00000442653 GPR152Q8TDT2 470 aa9.25□□□□□ -0.93
TOP3B-209ENST00000442653 HASPINQ8TF76 798 aa9.25□□□□□ -0.93
TOP3B-209ENST00000442653 STAMQ92783 540 aa9.25□□□□□ -0.93
TOP3B-209ENST00000442653 MTMR9Q96QG7 549 aa9.25□□□□□ -0.93
TOP3B-209ENST00000442653 PRKD2Q9BZL6 878 aa9.25□□□□□ -0.93
TOP3B-209ENST00000442653 PLEKHA4Q9H4M7 779 aa9.25□□□□□ -0.93
TOP3B-209ENST00000442653 TBC1D17Q9HA65 648 aa9.25□□□□□ -0.93
TOP3B-209ENST00000442653 WNT16Q9UBV4 365 aa9.25□□□□□ -0.93
TOP3B-209ENST00000442653 DPP7Q9UHL4 492 aa9.25□□□□□ -0.93
TOP3B-209ENST00000442653 ADAM28Q9UKQ2 775 aa9.25□□□□□ -0.93
TOP3B-209ENST00000442653 CA14Q9ULX7 337 aa9.25□□□□□ -0.93
TOP3B-209ENST00000442653 ZMYM2Q9UBW7 1377 aa9.24□□□□□ -0.93
TOP3B-209ENST00000442653 COL4A3Q01955 1670 aa9.24□□□□□ -0.93
TOP3B-209ENST00000442653 CASTOR2A6NHX0 329 aa9.24□□□□□ -0.93
TOP3B-209ENST00000442653 LRRIQ4A6NIV6 560 aa9.24□□□□□ -0.93
TOP3B-209ENST00000442653 ANHXE9PGG2 379 aa9.24□□□□□ -0.93
TOP3B-209ENST00000442653 PTGESO14684 152 aa9.24□□□□□ -0.93
TOP3B-209ENST00000442653 JAK2O60674 1132 aa9.24□□□□□ -0.93
TOP3B-209ENST00000442653 KIF4AO95239 1232 aa9.24□□□□□ -0.93
TOP3B-209ENST00000442653 C1RP00736 705 aa9.24□□□□□ -0.93
TOP3B-209ENST00000442653 EDN1P05305 212 aa9.24□□□□□ -0.93
TOP3B-209ENST00000442653 SRFP11831 508 aa9.24□□□□□ -0.93
TOP3B-209ENST00000442653 IGFBP6P24592 240 aaPredicted RBP9.24□□□□□ -0.93
TOP3B-209ENST00000442653 FOSBP53539 338 aa9.24□□□□□ -0.93
TOP3B-209ENST00000442653 HSP90AA2PQ14568 343 aaPredicted RBP9.24□□□□□ -0.93
TOP3B-209ENST00000442653 ME3Q16798 604 aa9.24□□□□□ -0.93
TOP3B-209ENST00000442653 CDCA2Q69YH5 1023 aaPredicted RBP9.24□□□□□ -0.93
TOP3B-209ENST00000442653 DIS3L2Q8IYB7 885 aaKnown RBP9.24□□□□□ -0.93
TOP3B-209ENST00000442653 GPR65Q8IYL9 337 aa9.24□□□□□ -0.93
TOP3B-209ENST00000442653 HACE1Q8IYU2 909 aa9.24□□□□□ -0.93
TOP3B-209ENST00000442653 ADSSL1Q8N142 457 aa9.24□□□□□ -0.93
TOP3B-209ENST00000442653 NSUN7Q8NE18 718 aaKnown RBP9.24□□□□□ -0.93
TOP3B-209ENST00000442653 HDAC7Q8WUI4 952 aa9.24□□□□□ -0.93
TOP3B-209ENST00000442653 BSNDQ8WZ55 320 aa9.24□□□□□ -0.93
TOP3B-209ENST00000442653 GTF3C6Q969F1 213 aa9.24□□□□□ -0.93
TOP3B-209ENST00000442653 FAM212AQ96EL1 285 aa9.24□□□□□ -0.93
TOP3B-209ENST00000442653 CCDC43Q96MW1 224 aaKnown RBP9.24□□□□□ -0.93
TOP3B-209ENST00000442653 RTP3Q9BQQ7 232 aa9.24□□□□□ -0.93
TOP3B-209ENST00000442653 RPP25Q9BUL9 199 aaKnown RBP9.24□□□□□ -0.93
TOP3B-209ENST00000442653 TMEM60Q9H2L4 133 aa9.24□□□□□ -0.93
TOP3B-209ENST00000442653 PIDD1Q9HB75 910 aa9.24□□□□□ -0.93
TOP3B-209ENST00000442653 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.24□□□□□ -0.93
TOP3B-209ENST00000442653 ZDHHC7Q9NXF8 308 aa9.24□□□□□ -0.93
TOP3B-209ENST00000442653 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.24□□□□□ -0.93
TOP3B-209ENST00000442653 FNIP2Q9P278 1114 aa9.24□□□□□ -0.93
TOP3B-209ENST00000442653 PARP2Q9UGN5 583 aa9.24□□□□□ -0.93
TOP3B-209ENST00000442653 USP20Q9Y2K6 914 aa9.24□□□□□ -0.93
TOP3B-209ENST00000442653 NUMBLQ9Y6R0 609 aa9.24□□□□□ -0.93
TOP3B-209ENST00000442653 MTCL1Q9Y4B5 1905 aaKnown RBP9.24□□□□□ -0.93
TOP3B-209ENST00000442653 CACNA1IQ9P0X4 2223 aa9.23□□□□□ -0.93
TOP3B-209ENST00000442653 STK25O00506 426 aa9.23□□□□□ -0.93
TOP3B-209ENST00000442653 ADAM12O43184 909 aa9.23□□□□□ -0.93
TOP3B-209ENST00000442653 MED24O75448 989 aa9.23□□□□□ -0.93
TOP3B-209ENST00000442653 TADA2AO75478 443 aa9.23□□□□□ -0.93
TOP3B-209ENST00000442653 ZMYND10O75800 440 aa9.23□□□□□ -0.93
TOP3B-209ENST00000442653 NTHL1P78549 312 aa9.23□□□□□ -0.93
TOP3B-209ENST00000442653 TUSC3Q13454 348 aa9.23□□□□□ -0.93
TOP3B-209ENST00000442653 GSE1Q14687 1217 aa9.23□□□□□ -0.93
TOP3B-209ENST00000442653 NAB2Q15742 525 aa9.23□□□□□ -0.93
TOP3B-209ENST00000442653 FAM171A1Q5VUB5 890 aa9.23□□□□□ -0.93
TOP3B-209ENST00000442653 CATSPER3Q86XQ3 398 aa9.23□□□□□ -0.93
TOP3B-209ENST00000442653 WASF1Q92558 559 aa9.23□□□□□ -0.93
TOP3B-209ENST00000442653 FGF14Q92915 247 aa9.23□□□□□ -0.93
TOP3B-209ENST00000442653 NXPE3Q969Y0 559 aa9.23□□□□□ -0.93
TOP3B-209ENST00000442653 CLSTN3Q9BQT9 956 aa9.23□□□□□ -0.93
TOP3B-209ENST00000442653 FZD8Q9H461 694 aa9.23□□□□□ -0.93
TOP3B-209ENST00000442653 PDZD7Q9H5P4 517 aa9.23□□□□□ -0.93
TOP3B-209ENST00000442653 BRMS1Q9HCU9 246 aa9.23□□□□□ -0.93
TOP3B-209ENST00000442653 ARHGEF3Q9NR81 526 aa9.23□□□□□ -0.93
TOP3B-209ENST00000442653 DLGAP2Q9P1A6 1054 aa9.23□□□□□ -0.93
TOP3B-209ENST00000442653 FBXW11Q9UKB1 542 aa9.23□□□□□ -0.93
TOP3B-209ENST00000442653 R4GN57 208 aa9.23□□□□□ -0.93
TOP3B-209ENST00000442653 SF3B1O75533 1304 aaKnown RBP eCLIP9.23□□□□□ -0.931e-12■■■■□ 23.6
TOP3B-209ENST00000442653 RECQL4O94761 1208 aa9.22□□□□□ -0.93
TOP3B-209ENST00000442653 DCNP07585 359 aaKnown RBP9.22□□□□□ -0.93
TOP3B-209ENST00000442653 XRCC6P12956 609 aaKnown RBP eCLIP9.22□□□□□ -0.93
TOP3B-209ENST00000442653 GLULP15104 373 aa9.22□□□□□ -0.93
TOP3B-209ENST00000442653 RFX1P22670 979 aa9.22□□□□□ -0.93
TOP3B-209ENST00000442653 FSHRP23945 695 aa9.22□□□□□ -0.93
TOP3B-209ENST00000442653 MCM7P33993 719 aa9.22□□□□□ -0.93
TOP3B-209ENST00000442653 CREMQ03060 361 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms