RNA–Protein interactions for RNA: ENST00000441821.5

SYN3-204, Transcript of synapsin III, humanhuman

TSL 1 (best)

Gene SYN3, Length 855 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-204ENST00000441821 ANO2Q9NQ90 1003 aa11.15□□□□□ -0.62
SYN3-204ENST00000441821 RAB23Q9ULC3 237 aa11.15□□□□□ -0.62
SYN3-204ENST00000441821 KCNH3Q9ULD8 1083 aa11.15□□□□□ -0.62
SYN3-204ENST00000441821 HES2Q9Y543 173 aa11.15□□□□□ -0.62
SYN3-204ENST00000441821 MAP1BP46821 2468 aaKnown RBP11.15□□□□□ -0.62
SYN3-204ENST00000441821 ZZEF1O43149 2961 aa11.15□□□□□ -0.62
SYN3-204ENST00000441821 LAMA1P25391 3075 aa11.15□□□□□ -0.63
SYN3-204ENST00000441821 SF3B1O75533 1304 aaKnown RBP eCLIP11.14□□□□□ -0.63
SYN3-204ENST00000441821 SPEGQ15772 3267 aa11.14□□□□□ -0.63
SYN3-204ENST00000441821 TDRD15B5MCY1 1934 aaKnown RBP11.14□□□□□ -0.63
SYN3-204ENST00000441821 CCL16O15467 120 aa11.14□□□□□ -0.63
SYN3-204ENST00000441821 TSPAN1O60635 241 aa11.14□□□□□ -0.63
SYN3-204ENST00000441821 ECI2O75521 394 aa11.14□□□□□ -0.63
SYN3-204ENST00000441821 C8AP07357 584 aa11.14□□□□□ -0.63
SYN3-204ENST00000441821 AKAP17AQ02040 695 aaKnown RBP11.14□□□□□ -0.63
SYN3-204ENST00000441821 GRIK3Q13003 919 aa11.14□□□□□ -0.63
SYN3-204ENST00000441821 MTAPQ13126 283 aa11.14□□□□□ -0.63
SYN3-204ENST00000441821 UVSSAQ2YD98 709 aa11.14□□□□□ -0.63
SYN3-204ENST00000441821 TSGA10IPQ3SY00 556 aa11.14□□□□□ -0.63
SYN3-204ENST00000441821 RTP2Q5QGT7 225 aa11.14□□□□□ -0.63
SYN3-204ENST00000441821 PRSS55Q6UWB4 352 aaPredicted RBP11.14□□□□□ -0.63
SYN3-204ENST00000441821 FERMT3Q86UX7 667 aa11.14□□□□□ -0.63
SYN3-204ENST00000441821 HACE1Q8IYU2 909 aa11.14□□□□□ -0.63
SYN3-204ENST00000441821 ZNF579Q8NAF0 562 aaKnown RBP11.14□□□□□ -0.63
SYN3-204ENST00000441821 TCP11Q8WWU5 503 aa11.14□□□□□ -0.63
SYN3-204ENST00000441821 C22orf23Q9BZE7 217 aa11.14□□□□□ -0.63
SYN3-204ENST00000441821 NAP1L2Q9ULW6 460 aaPredicted RBP11.14□□□□□ -0.63
SYN3-204ENST00000441821 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.14□□□□□ -0.63
SYN3-204ENST00000441821 ZMYM2Q9UBW7 1377 aa11.14□□□□□ -0.63
SYN3-204ENST00000441821 WDFY3Q8IZQ1 3526 aa11.13□□□□□ -0.63
SYN3-204ENST00000441821 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.13□□□□□ -0.63
SYN3-204ENST00000441821 SHISA7A6NL88 538 aa11.13□□□□□ -0.63
SYN3-204ENST00000441821 EML1O00423 815 aa11.13□□□□□ -0.63
SYN3-204ENST00000441821 TDP2O95551 362 aa11.13□□□□□ -0.63
SYN3-204ENST00000441821 P4HBP07237 508 aaKnown RBP11.13□□□□□ -0.63
SYN3-204ENST00000441821 RETP07949 1114 aa11.13□□□□□ -0.63
SYN3-204ENST00000441821 HMGB1P09429 215 aaKnown RBP11.13□□□□□ -0.63
SYN3-204ENST00000441821 PTENP60484 403 aa11.13□□□□□ -0.63
SYN3-204ENST00000441821 POU5F1BQ06416 359 aa11.13□□□□□ -0.63
SYN3-204ENST00000441821 HSP90AA2PQ14568 343 aaPredicted RBP11.13□□□□□ -0.63
SYN3-204ENST00000441821 PPP2R5DQ14738 602 aa11.13□□□□□ -0.63
SYN3-204ENST00000441821 ADCK5Q3MIX3 580 aa11.13□□□□□ -0.63
SYN3-204ENST00000441821 MOXD1Q6UVY6 613 aa11.13□□□□□ -0.63
SYN3-204ENST00000441821 RTL10Q7L3V2 364 aa11.13□□□□□ -0.63
SYN3-204ENST00000441821 NPAS3Q8IXF0 933 aa11.13□□□□□ -0.63
SYN3-204ENST00000441821 ZNF687Q8N1G0 1237 aa11.13□□□□□ -0.63
SYN3-204ENST00000441821 LNX1Q8TBB1 728 aaPredicted RBP11.13□□□□□ -0.63
SYN3-204ENST00000441821 PIK3R5Q8WYR1 880 aa11.13□□□□□ -0.63
SYN3-204ENST00000441821 CPB2Q96IY4 423 aa11.13□□□□□ -0.63
SYN3-204ENST00000441821 IER2Q9BTL4 223 aa11.13□□□□□ -0.63
SYN3-204ENST00000441821 TTPALQ9BTX7 342 aa11.13□□□□□ -0.63
SYN3-204ENST00000441821 APOL6Q9BWW8 343 aa11.13□□□□□ -0.63
SYN3-204ENST00000441821 TRIM6Q9C030 488 aaPredicted RBP11.13□□□□□ -0.63
SYN3-204ENST00000441821 CHRDQ9H2X0 955 aa11.13□□□□□ -0.63
SYN3-204ENST00000441821 SH3GLB2Q9NR46 395 aa11.13□□□□□ -0.63
SYN3-204ENST00000441821 GDE1Q9NZC3 331 aa11.13□□□□□ -0.63
SYN3-204ENST00000441821 VPS54Q9P1Q0 977 aa11.13□□□□□ -0.63
SYN3-204ENST00000441821 POLIQ9UNA4 740 aa11.13□□□□□ -0.63
SYN3-204ENST00000441821 NID2Q14112 1375 aa11.13□□□□□ -0.63
SYN3-204ENST00000441821 DOCK6Q96HP0 2047 aa11.13□□□□□ -0.63
SYN3-204ENST00000441821 MAN2B1O00754 1011 aa11.12□□□□□ -0.63
SYN3-204ENST00000441821 AKAP5P24588 427 aa11.12□□□□□ -0.63
SYN3-204ENST00000441821 FGD1P98174 961 aa11.12□□□□□ -0.63
SYN3-204ENST00000441821 PPP2R5CQ13362 524 aa11.12□□□□□ -0.63
SYN3-204ENST00000441821 KRT32Q14532 448 aa11.12□□□□□ -0.63
SYN3-204ENST00000441821 MXD4Q14582 209 aaPredicted RBP11.12□□□□□ -0.63
SYN3-204ENST00000441821 EMC2Q15006 297 aa11.12□□□□□ -0.63
SYN3-204ENST00000441821 PSMD5Q16401 504 aa11.12□□□□□ -0.63
SYN3-204ENST00000441821 CSRP2Q16527 193 aa11.12□□□□□ -0.63
SYN3-204ENST00000441821 LPAL2Q16609 132 aa11.12□□□□□ -0.63
SYN3-204ENST00000441821 PABPC1LQ4VXU2 614 aaKnown RBP11.12□□□□□ -0.63
SYN3-204ENST00000441821 AXDND1Q5T1B0 1012 aaPredicted RBP11.12□□□□□ -0.63
SYN3-204ENST00000441821 FAM171A1Q5VUB5 890 aa11.12□□□□□ -0.63
SYN3-204ENST00000441821 PDXDC1Q6P996 788 aa11.12□□□□□ -0.63
SYN3-204ENST00000441821 IFNLR1Q8IU57 520 aaPredicted RBP11.12□□□□□ -0.63
SYN3-204ENST00000441821 RASEFQ8IZ41 740 aa11.12□□□□□ -0.63
SYN3-204ENST00000441821 SLC7A14Q8TBB6 771 aa11.12□□□□□ -0.63
SYN3-204ENST00000441821 DDX1Q92499 740 aaKnown RBP11.12□□□□□ -0.63
SYN3-204ENST00000441821 RABGGTAQ92696 567 aa11.12□□□□□ -0.63
SYN3-204ENST00000441821 DNASE1L2Q92874 299 aa11.12□□□□□ -0.63
SYN3-204ENST00000441821 ELSPBP1Q96BH3 223 aa11.12□□□□□ -0.63
SYN3-204ENST00000441821 RNF26Q9BY78 433 aaPredicted RBP11.12□□□□□ -0.63
SYN3-204ENST00000441821 PLA2G2FQ9BZM2 168 aa11.12□□□□□ -0.63
SYN3-204ENST00000441821 NXF3Q9H4D5 531 aaKnown RBP11.12□□□□□ -0.63
SYN3-204ENST00000441821 HEBP1Q9NRV9 189 aa11.12□□□□□ -0.63
SYN3-204ENST00000441821 SEMA4GQ9NTN9 838 aa11.12□□□□□ -0.63
SYN3-204ENST00000441821 HCFC1R1Q9NWW0 138 aa11.12□□□□□ -0.63
SYN3-204ENST00000441821 WRAP73Q9P2S5 460 aaPredicted RBP11.12□□□□□ -0.63
SYN3-204ENST00000441821 DNMT3BQ9UBC3 853 aaKnown RBP11.12□□□□□ -0.63
SYN3-204ENST00000441821 INO80B-WBP1J3KQ70 363 aa11.11□□□□□ -0.63
SYN3-204ENST00000441821 ADAM12O43184 909 aa11.11□□□□□ -0.63
SYN3-204ENST00000441821 FOXD2O60548 495 aaPredicted RBP11.11□□□□□ -0.63
SYN3-204ENST00000441821 ARF4P18085 180 aaPredicted RBP11.11□□□□□ -0.63
SYN3-204ENST00000441821 CCR3P51677 355 aa11.11□□□□□ -0.63
SYN3-204ENST00000441821 NLRP5P59047 1200 aa11.11□□□□□ -0.63
SYN3-204ENST00000441821 MBTD1Q05BQ5 628 aa11.11□□□□□ -0.63
SYN3-204ENST00000441821 TUSC3Q13454 348 aa11.11□□□□□ -0.63
SYN3-204ENST00000441821 RAB33AQ14088 237 aa11.11□□□□□ -0.63
SYN3-204ENST00000441821 TFDP1Q14186 410 aa11.11□□□□□ -0.63
SYN3-204ENST00000441821 NTRK3Q16288 839 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms