RNA–Protein interactions for RNA: ENST00000441756.1

MCF2L-217, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 370 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-217ENST00000441756 AP3M2P53677 418 aa17.27■□□□□ 0.36
MCF2L-217ENST00000441756 GSDMDP57764 484 aa17.27■□□□□ 0.36
MCF2L-217ENST00000441756 PAK2Q13177 524 aa17.27■□□□□ 0.36
MCF2L-217ENST00000441756 FBXO47Q5MNV8 452 aa17.27■□□□□ 0.36
MCF2L-217ENST00000441756 PARD3BQ8TEW8 1205 aa17.27■□□□□ 0.36
MCF2L-217ENST00000441756 NUP58Q9BVL2 599 aa17.27■□□□□ 0.36
MCF2L-217ENST00000441756 RPF1Q9H9Y2 349 aaKnown RBP17.27■□□□□ 0.36
MCF2L-217ENST00000441756 CPSF3Q9UKF6 684 aaKnown RBP17.27■□□□□ 0.36
MCF2L-217ENST00000441756 NOC2LQ9Y3T9 749 aaKnown RBP17.27■□□□□ 0.36
MCF2L-217ENST00000441756 FAM189A1O60320 539 aa17.26■□□□□ 0.35
MCF2L-217ENST00000441756 PQBP1O60828 265 aaKnown RBP17.26■□□□□ 0.35
MCF2L-217ENST00000441756 PARNO95453 639 aaKnown RBP17.26■□□□□ 0.35
MCF2L-217ENST00000441756 NPTXRO95502 500 aa17.26■□□□□ 0.35
MCF2L-217ENST00000441756 SELPP16109 830 aa17.26■□□□□ 0.35
MCF2L-217ENST00000441756 HOXA11P31270 313 aaPredicted RBP17.26■□□□□ 0.35
MCF2L-217ENST00000441756 GRM5P41594 1212 aa17.26■□□□□ 0.35
MCF2L-217ENST00000441756 FMO5P49326 533 aa17.26■□□□□ 0.35
MCF2L-217ENST00000441756 MXI1P50539 228 aa17.26■□□□□ 0.35
MCF2L-217ENST00000441756 MYL7Q01449 175 aa17.26■□□□□ 0.35
MCF2L-217ENST00000441756 SYCP1Q15431 976 aa17.26■□□□□ 0.35
MCF2L-217ENST00000441756 ZNF618Q5T7W0 954 aa17.26■□□□□ 0.35
MCF2L-217ENST00000441756 GBP6Q6ZN66 633 aa17.26■□□□□ 0.35
MCF2L-217ENST00000441756 NECAB2Q7Z6G3 386 aa17.26■□□□□ 0.35
MCF2L-217ENST00000441756 PPFIBP1Q86W92 1011 aa17.26■□□□□ 0.35
MCF2L-217ENST00000441756 THNSL1Q8IYQ7 743 aa17.26■□□□□ 0.35
MCF2L-217ENST00000441756 HACE1Q8IYU2 909 aa17.26■□□□□ 0.35
MCF2L-217ENST00000441756 SPC24Q8NBT2 197 aa17.26■□□□□ 0.35
MCF2L-217ENST00000441756 CGRRF1Q99675 332 aa17.26■□□□□ 0.35
MCF2L-217ENST00000441756 PMM2O15305 246 aa17.25■□□□□ 0.35
MCF2L-217ENST00000441756 TRIM49P0CI25 452 aa17.25■□□□□ 0.35
MCF2L-217ENST00000441756 TRIM49CP0CI26 452 aa17.25■□□□□ 0.35
MCF2L-217ENST00000441756 STAG3L1P0CL83 205 aa17.25■□□□□ 0.35
MCF2L-217ENST00000441756 GHRP10912 638 aa17.25■□□□□ 0.35
MCF2L-217ENST00000441756 ZSCAN20P17040 1043 aaPredicted RBP17.25■□□□□ 0.35
MCF2L-217ENST00000441756 MNX1P50219 401 aaPredicted RBP17.25■□□□□ 0.35
MCF2L-217ENST00000441756 RAB27AP51159 221 aa17.25■□□□□ 0.35
MCF2L-217ENST00000441756 ATN1P54259 1190 aaPredicted RBP17.25■□□□□ 0.35
MCF2L-217ENST00000441756 YARSP54577 528 aaKnown RBP17.25■□□□□ 0.35
MCF2L-217ENST00000441756 TWF2Q6IBS0 349 aaKnown RBP17.25■□□□□ 0.35
MCF2L-217ENST00000441756 CRELD2Q6UXH1 353 aaPredicted RBP17.25■□□□□ 0.35
MCF2L-217ENST00000441756 LRRC8DQ7L1W4 858 aa17.25■□□□□ 0.35
MCF2L-217ENST00000441756 CD302Q8IX05 232 aa17.25■□□□□ 0.35
MCF2L-217ENST00000441756 ZSWIM2Q8NEG5 633 aa17.25■□□□□ 0.35
MCF2L-217ENST00000441756 CCDC127Q96BQ5 260 aa17.25■□□□□ 0.35
MCF2L-217ENST00000441756 TMEM8AQ9HCN3 771 aa17.25■□□□□ 0.35
MCF2L-217ENST00000441756 TOPORSQ9NS56 1045 aaPredicted RBP17.25■□□□□ 0.35
MCF2L-217ENST00000441756 ST3GAL5Q9UNP4 418 aa17.25■□□□□ 0.35
MCF2L-217ENST00000441756 DAAM1Q9Y4D1 1078 aa17.25■□□□□ 0.35
MCF2L-217ENST00000441756 LRRIQ3A6PVS8 624 aaPredicted RBP17.24■□□□□ 0.35
MCF2L-217ENST00000441756 DLATP10515 647 aaKnown RBP17.24■□□□□ 0.35
MCF2L-217ENST00000441756 TNNI1P19237 187 aa17.24■□□□□ 0.35
MCF2L-217ENST00000441756 TRIM21P19474 475 aaKnown RBP17.24■□□□□ 0.35
MCF2L-217ENST00000441756 NFX1Q12986 1120 aaKnown RBP17.24■□□□□ 0.35
MCF2L-217ENST00000441756 LPIN1Q14693 890 aa17.24■□□□□ 0.35
MCF2L-217ENST00000441756 EXOC3L4Q17RC7 722 aa17.24■□□□□ 0.35
MCF2L-217ENST00000441756 KRT39Q6A163 491 aa17.24■□□□□ 0.35
MCF2L-217ENST00000441756 CDR2LQ86X02 465 aaPredicted RBP17.24■□□□□ 0.35
MCF2L-217ENST00000441756 WDR49Q8IV35 697 aa17.24■□□□□ 0.35
MCF2L-217ENST00000441756 CCDC150Q8NCX0 1101 aa17.24■□□□□ 0.35
MCF2L-217ENST00000441756 NEK11Q8NG66 645 aa17.24■□□□□ 0.35
MCF2L-217ENST00000441756 ACAP3Q96P50 834 aa17.24■□□□□ 0.35
MCF2L-217ENST00000441756 ERVK-5Q9HDB9 667 aa17.24■□□□□ 0.35
MCF2L-217ENST00000441756 TULP1O00294 542 aaPredicted RBP17.23■□□□□ 0.35
MCF2L-217ENST00000441756 NRDCO43847 1150 aa17.23■□□□□ 0.35
MCF2L-217ENST00000441756 SKIP12755 728 aa17.23■□□□□ 0.35
MCF2L-217ENST00000441756 CD52P31358 61 aa17.23■□□□□ 0.35
MCF2L-217ENST00000441756 TNFSF9P41273 254 aa17.23■□□□□ 0.35
MCF2L-217ENST00000441756 CLDN10P78369 228 aa17.23■□□□□ 0.35
MCF2L-217ENST00000441756 ENOX2Q16206 610 aaKnown RBP17.23■□□□□ 0.35
MCF2L-217ENST00000441756 TRIM60Q495X7 471 aa17.23■□□□□ 0.35
MCF2L-217ENST00000441756 FIGNQ5HY92 759 aa17.23■□□□□ 0.35
MCF2L-217ENST00000441756 ZBTB41Q5SVQ8 909 aa17.23■□□□□ 0.35
MCF2L-217ENST00000441756 NT5DC4Q86YG4 428 aa17.23■□□□□ 0.35
MCF2L-217ENST00000441756 CNGA4Q8IV77 575 aa17.23■□□□□ 0.35
MCF2L-217ENST00000441756 ZNF397Q8NF99 534 aaPredicted RBP17.23■□□□□ 0.35
MCF2L-217ENST00000441756 DIS3LQ8TF46 1054 aaKnown RBP17.23■□□□□ 0.35
MCF2L-217ENST00000441756 TRIM44Q96DX7 344 aaPredicted RBP17.23■□□□□ 0.35
MCF2L-217ENST00000441756 PAWRQ96IZ0 340 aaKnown RBP17.23■□□□□ 0.35
MCF2L-217ENST00000441756 TSPAN18Q96SJ8 248 aa17.23■□□□□ 0.35
MCF2L-217ENST00000441756 ASB7Q9H672 318 aa17.23■□□□□ 0.35
MCF2L-217ENST00000441756 MMRN2Q9H8L6 949 aa17.23■□□□□ 0.35
MCF2L-217ENST00000441756 PLEKHA5Q9HAU0 1116 aa17.23■□□□□ 0.35
MCF2L-217ENST00000441756 PDE11AQ9HCR9 933 aa17.23■□□□□ 0.35
MCF2L-217ENST00000441756 GCNT4Q9P109 453 aa17.23■□□□□ 0.35
MCF2L-217ENST00000441756 PADI3Q9ULW8 664 aa17.23■□□□□ 0.35
MCF2L-217ENST00000441756 SIK3Q9Y2K2 1263 aa17.23■□□□□ 0.35
MCF2L-217ENST00000441756 HTTP42858 3142 aa17.23■□□□□ 0.35
MCF2L-217ENST00000441756 RFX1P22670 979 aa17.22■□□□□ 0.35
MCF2L-217ENST00000441756 GCLMP48507 274 aa17.22■□□□□ 0.35
MCF2L-217ENST00000441756 OSTNP61366 133 aa17.22■□□□□ 0.35
MCF2L-217ENST00000441756 DLG4P78352 724 aa17.22■□□□□ 0.35
MCF2L-217ENST00000441756 TLE2Q04725 743 aa17.22■□□□□ 0.35
MCF2L-217ENST00000441756 SEZ6Q53EL9 994 aa17.22■□□□□ 0.35
MCF2L-217ENST00000441756 CEP120Q8N960 986 aa17.22■□□□□ 0.35
MCF2L-217ENST00000441756 PLEKHO2Q8TD55 490 aa17.22■□□□□ 0.35
MCF2L-217ENST00000441756 FAM212AQ96EL1 285 aa17.22■□□□□ 0.35
MCF2L-217ENST00000441756 ANKRD36BP1Q96IX9 119 aa17.22■□□□□ 0.35
MCF2L-217ENST00000441756 FTHL17Q9BXU8 183 aa17.22■□□□□ 0.35
MCF2L-217ENST00000441756 EDEM3Q9BZQ6 932 aa17.22■□□□□ 0.35
MCF2L-217ENST00000441756 HIPK3Q9H422 1215 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms