RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 SAR1BQ9Y6B6 198 aa6.51□□□□□ -1.37
VPS50-205ENST00000441602 ARID2Q68CP9 1835 aa6.5□□□□□ -1.37
VPS50-205ENST00000441602 ZNF236Q9UL36 1845 aa6.5□□□□□ -1.37
VPS50-205ENST00000441602 RPLP2P05387 115 aaKnown RBP6.5□□□□□ -1.37
VPS50-205ENST00000441602 PLEKP08567 350 aaPredicted RBP6.5□□□□□ -1.37
VPS50-205ENST00000441602 TMEM191BP0C7N4 346 aa6.5□□□□□ -1.37
VPS50-205ENST00000441602 MCF2P10911 925 aa6.5□□□□□ -1.37
VPS50-205ENST00000441602 ADSSP30520 456 aa6.5□□□□□ -1.37
VPS50-205ENST00000441602 GCNT1Q02742 428 aa6.5□□□□□ -1.37
VPS50-205ENST00000441602 GRIK4Q16099 956 aa6.5□□□□□ -1.37
VPS50-205ENST00000441602 ASTE1Q2TB18 679 aaPredicted RBP6.5□□□□□ -1.37
VPS50-205ENST00000441602 SLC39A4Q6P5W5 647 aa6.5□□□□□ -1.37
VPS50-205ENST00000441602 C17orf99Q6UX52 265 aa6.5□□□□□ -1.37
VPS50-205ENST00000441602 IRF2BP2Q7Z5L9 587 aa6.5□□□□□ -1.37
VPS50-205ENST00000441602 WDR49Q8IV35 697 aa6.5□□□□□ -1.37
VPS50-205ENST00000441602 GCOM2Q9BZD3 368 aaPredicted RBP6.5□□□□□ -1.37
VPS50-205ENST00000441602 RNF14Q9UBS8 474 aa6.5□□□□□ -1.37
VPS50-205ENST00000441602 TNFSF13BQ9Y275 285 aa6.5□□□□□ -1.37
VPS50-205ENST00000441602 TELO2Q9Y4R8 837 aa6.5□□□□□ -1.37
VPS50-205ENST00000441602 PLXNB2O15031 1838 aa6.5□□□□□ -1.37
VPS50-205ENST00000441602 A0A0A6YYK5 440 aaPredicted RBP6.5□□□□□ -1.37
VPS50-205ENST00000441602 TMEM88BA6NKF7 163 aa6.5□□□□□ -1.37
VPS50-205ENST00000441602 IGF2BP3O00425 579 aaKnown RBP eCLIP6.5□□□□□ -1.37
VPS50-205ENST00000441602 CA12O43570 354 aa6.5□□□□□ -1.37
VPS50-205ENST00000441602 HLA-DRAP01903 254 aa6.5□□□□□ -1.37
VPS50-205ENST00000441602 HOXD8P13378 290 aaPredicted RBP6.5□□□□□ -1.37
VPS50-205ENST00000441602 SMPD1P17405 629 aa6.5□□□□□ -1.37
VPS50-205ENST00000441602 CYP2B6P20813 491 aa6.5□□□□□ -1.37
VPS50-205ENST00000441602 CLCN3P51790 818 aa6.5□□□□□ -1.37
VPS50-205ENST00000441602 PTK2Q05397 1052 aa6.5□□□□□ -1.37
VPS50-205ENST00000441602 ARHGEF6Q15052 776 aa6.5□□□□□ -1.37
VPS50-205ENST00000441602 FAM187BQ17R55 369 aa6.5□□□□□ -1.37
VPS50-205ENST00000441602 TEX35Q5T0J7 233 aa6.5□□□□□ -1.37
VPS50-205ENST00000441602 SV2AQ7L0J3 742 aa6.5□□□□□ -1.37
VPS50-205ENST00000441602 TAS1R3Q7RTX0 852 aa6.5□□□□□ -1.37
VPS50-205ENST00000441602 ZBTB33Q86T24 672 aa6.5□□□□□ -1.37
VPS50-205ENST00000441602 IFNLR1Q8IU57 520 aaPredicted RBP6.5□□□□□ -1.37
VPS50-205ENST00000441602 NPLOC4Q8TAT6 608 aa6.5□□□□□ -1.37
VPS50-205ENST00000441602 NLRP7Q8WX94 980 aa6.5□□□□□ -1.37
VPS50-205ENST00000441602 TRIM11Q96F44 468 aa6.5□□□□□ -1.37
VPS50-205ENST00000441602 ACO2Q99798 780 aaKnown RBP6.5□□□□□ -1.37
VPS50-205ENST00000441602 AGPAT1Q99943 283 aa6.5□□□□□ -1.37
VPS50-205ENST00000441602 LRRC37A2A6NM11 1700 aa6.5□□□□□ -1.37
VPS50-205ENST00000441602 TRPM7Q96QT4 1865 aa6.5□□□□□ -1.37
VPS50-205ENST00000441602 CLTAP09496 248 aa6.49□□□□□ -1.37
VPS50-205ENST00000441602 KRT5P13647 590 aa6.49□□□□□ -1.37
VPS50-205ENST00000441602 P4HA1P13674 534 aa6.49□□□□□ -1.37
VPS50-205ENST00000441602 AKR1A1P14550 325 aa6.49□□□□□ -1.37
VPS50-205ENST00000441602 HOXD10P28358 340 aa6.49□□□□□ -1.37
VPS50-205ENST00000441602 CHMP4BP1P59074 171 aa6.49□□□□□ -1.37
VPS50-205ENST00000441602 MCL1Q07820 350 aa6.49□□□□□ -1.37
VPS50-205ENST00000441602 NOGQ13253 232 aa6.49□□□□□ -1.37
VPS50-205ENST00000441602 DUOXA2Q1HG44 320 aa6.49□□□□□ -1.37
VPS50-205ENST00000441602 MTHFD1LQ6UB35 978 aa6.49□□□□□ -1.37
VPS50-205ENST00000441602 TRIM72Q6ZMU5 477 aa6.49□□□□□ -1.37
VPS50-205ENST00000441602 TSHZ1Q6ZSZ6 1077 aa6.49□□□□□ -1.37
VPS50-205ENST00000441602 ZNF571Q7Z3V5 609 aaPredicted RBP6.49□□□□□ -1.37
VPS50-205ENST00000441602 TLK2Q86UE8 772 aa6.49□□□□□ -1.37
VPS50-205ENST00000441602 ZNF677Q86XU0 584 aa6.49□□□□□ -1.37
VPS50-205ENST00000441602 CD302Q8IX05 232 aa6.49□□□□□ -1.37
VPS50-205ENST00000441602 RHOT2Q8IXI1 618 aa6.49□□□□□ -1.37
VPS50-205ENST00000441602 SELENOOQ9BVL4 669 aa6.49□□□□□ -1.37
VPS50-205ENST00000441602 CCDC113Q9H0I3 377 aa6.49□□□□□ -1.37
VPS50-205ENST00000441602 R3HDMLQ9H3Y0 253 aa6.49□□□□□ -1.37
VPS50-205ENST00000441602 FZD8Q9H461 694 aa6.49□□□□□ -1.37
VPS50-205ENST00000441602 NAGPAQ9UK23 515 aa6.49□□□□□ -1.37
VPS50-205ENST00000441602 NRCAMQ92823 1304 aa6.49□□□□□ -1.37
VPS50-205ENST00000441602 A0A087X0T9 212 aa6.49□□□□□ -1.37
VPS50-205ENST00000441602 LRRN2O75325 713 aa6.49□□□□□ -1.37
VPS50-205ENST00000441602 ERLIN1O75477 346 aa6.49□□□□□ -1.37
VPS50-205ENST00000441602 MYL3P08590 195 aa6.49□□□□□ -1.37
VPS50-205ENST00000441602 TMEM253P0C7T8 217 aa6.49□□□□□ -1.37
VPS50-205ENST00000441602 FAM228BP0C875 321 aa6.49□□□□□ -1.37
VPS50-205ENST00000441602 ZNF286BP0CG31 522 aa6.49□□□□□ -1.37
VPS50-205ENST00000441602 PRLRP16471 622 aa6.49□□□□□ -1.37
VPS50-205ENST00000441602 ACOT2P49753 483 aa6.49□□□□□ -1.37
VPS50-205ENST00000441602 PSEN2P49810 448 aa6.49□□□□□ -1.37
VPS50-205ENST00000441602 DLG4P78352 724 aa6.49□□□□□ -1.37
VPS50-205ENST00000441602 CLUL1Q15846 466 aa6.49□□□□□ -1.37
VPS50-205ENST00000441602 DCAF4L1Q3SXM0 396 aa6.49□□□□□ -1.37
VPS50-205ENST00000441602 ZACNQ401N2 412 aa6.49□□□□□ -1.37
VPS50-205ENST00000441602 PAPD7Q5XG87 772 aaKnown RBP6.49□□□□□ -1.37
VPS50-205ENST00000441602 GJB7Q6PEY0 223 aa6.49□□□□□ -1.37
VPS50-205ENST00000441602 RABGGTAQ92696 567 aa6.49□□□□□ -1.37
VPS50-205ENST00000441602 FAM212AQ96EL1 285 aa6.49□□□□□ -1.37
VPS50-205ENST00000441602 CCDC94Q9BW85 323 aaPredicted RBP6.49□□□□□ -1.37
VPS50-205ENST00000441602 LACRTQ9GZZ8 138 aa6.49□□□□□ -1.37
VPS50-205ENST00000441602 KATNBL1Q9H079 304 aa6.49□□□□□ -1.37
VPS50-205ENST00000441602 A6NJR5 290 aa6.49□□□□□ -1.37
VPS50-205ENST00000441602 M0QZ92 97 aa6.49□□□□□ -1.37
VPS50-205ENST00000441602 MOCS3O95396 460 aa6.49□□□□□ -1.37
VPS50-205ENST00000441602 NLRP11P59045 1033 aaKnown RBP6.49□□□□□ -1.37
VPS50-205ENST00000441602 MFSD10Q14728 455 aa6.49□□□□□ -1.37
VPS50-205ENST00000441602 RSPH3Q86UC2 560 aa6.49□□□□□ -1.37
VPS50-205ENST00000441602 TTC39CQ8N584 583 aa6.49□□□□□ -1.37
VPS50-205ENST00000441602 TAS1R2Q8TE23 839 aa6.49□□□□□ -1.37
VPS50-205ENST00000441602 TRAPPC12Q8WVT3 735 aa6.49□□□□□ -1.37
VPS50-205ENST00000441602 SHC3Q92529 594 aa6.49□□□□□ -1.37
VPS50-205ENST00000441602 PDE11AQ9HCR9 933 aa6.49□□□□□ -1.37
VPS50-205ENST00000441602 ANKRD62A6NC57 917 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms