RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 KRT13P13646 458 aa12.74□□□□□ -0.37
LTBR-203ENST00000441074 VCAM1P19320 739 aa12.74□□□□□ -0.37
LTBR-203ENST00000441074 NR2F2P24468 414 aa12.74□□□□□ -0.37
LTBR-203ENST00000441074 PCK1P35558 622 aa12.74□□□□□ -0.37
LTBR-203ENST00000441074 IKQ13123 557 aaPredicted RBP12.74□□□□□ -0.37
LTBR-203ENST00000441074 RASA3Q14644 834 aa12.74□□□□□ -0.37
LTBR-203ENST00000441074 TNIP1Q15025 636 aa12.74□□□□□ -0.37
LTBR-203ENST00000441074 HERC4Q5GLZ8 1057 aaPredicted RBP12.74□□□□□ -0.37
LTBR-203ENST00000441074 DPY19L2Q6NUT2 758 aa12.74□□□□□ -0.37
LTBR-203ENST00000441074 TRMT10CQ7L0Y3 403 aaKnown RBP12.74□□□□□ -0.37
LTBR-203ENST00000441074 AGGF1Q8N302 714 aaeCLIP12.74□□□□□ -0.37
LTBR-203ENST00000441074 AGBL3Q8NEM8 1001 aa12.74□□□□□ -0.37
LTBR-203ENST00000441074 LNX1Q8TBB1 728 aaPredicted RBP12.74□□□□□ -0.37
LTBR-203ENST00000441074 PIGOQ8TEQ8 1089 aa12.74□□□□□ -0.37
LTBR-203ENST00000441074 TEKT4Q8WW24 435 aa12.74□□□□□ -0.37
LTBR-203ENST00000441074 GRAMD1AQ96CP6 724 aa12.74□□□□□ -0.37
LTBR-203ENST00000441074 C18orf8Q96DM3 657 aa12.74□□□□□ -0.37
LTBR-203ENST00000441074 LRMDAQ9H2I8 198 aa12.74□□□□□ -0.37
LTBR-203ENST00000441074 ZNF646O15015 1829 aaPredicted RBP12.74□□□□□ -0.37
LTBR-203ENST00000441074 FOCADQ5VW36 1801 aa12.74□□□□□ -0.37
LTBR-203ENST00000441074 PEX11AO75192 247 aa12.74□□□□□ -0.37
LTBR-203ENST00000441074 NDUFB10O96000 172 aa12.74□□□□□ -0.37
LTBR-203ENST00000441074 PLA2G4BP0C869 781 aa12.74□□□□□ -0.37
LTBR-203ENST00000441074 TPBGLP0DKB5 382 aa12.74□□□□□ -0.37
LTBR-203ENST00000441074 SSR1P43307 286 aaKnown RBP12.74□□□□□ -0.37
LTBR-203ENST00000441074 RAD23BP54727 409 aa12.74□□□□□ -0.37
LTBR-203ENST00000441074 MGAT5Q09328 741 aa12.74□□□□□ -0.37
LTBR-203ENST00000441074 ZNF211Q13398 564 aaPredicted RBP12.74□□□□□ -0.37
LTBR-203ENST00000441074 SNX1Q13596 522 aa12.74□□□□□ -0.37
LTBR-203ENST00000441074 ZNF568Q3ZCX4 644 aa12.74□□□□□ -0.37
LTBR-203ENST00000441074 TMEM179Q6ZVK1 233 aa12.74□□□□□ -0.37
LTBR-203ENST00000441074 APBB1IPQ7Z5R6 666 aaPredicted RBP12.74□□□□□ -0.37
LTBR-203ENST00000441074 ENDOVQ8N8Q3 282 aaKnown RBP12.74□□□□□ -0.37
LTBR-203ENST00000441074 OLIG1Q8TAK6 271 aa12.74□□□□□ -0.37
LTBR-203ENST00000441074 FAM151AQ8WW52 585 aa12.74□□□□□ -0.37
LTBR-203ENST00000441074 HAS1Q92839 578 aa12.74□□□□□ -0.37
LTBR-203ENST00000441074 ART4Q93070 314 aa12.74□□□□□ -0.37
LTBR-203ENST00000441074 PCDHA12Q9UN75 941 aa12.74□□□□□ -0.37
LTBR-203ENST00000441074 ATRNL1Q5VV63 1379 aa12.74□□□□□ -0.37
LTBR-203ENST00000441074 IRF6O14896 467 aa12.73□□□□□ -0.37
LTBR-203ENST00000441074 ATXN8OSP0DMR3 200 aa12.73□□□□□ -0.37
LTBR-203ENST00000441074 ACADSP16219 412 aa12.73□□□□□ -0.37
LTBR-203ENST00000441074 CTNNA2P26232 953 aa12.73□□□□□ -0.37
LTBR-203ENST00000441074 STAT1P42224 750 aa12.73□□□□□ -0.37
LTBR-203ENST00000441074 PEX5P50542 639 aa12.73□□□□□ -0.37
LTBR-203ENST00000441074 USH1GQ495M9 461 aa12.73□□□□□ -0.37
LTBR-203ENST00000441074 CGB2Q6NT52 195 aa12.73□□□□□ -0.37
LTBR-203ENST00000441074 MTHFD1LQ6UB35 978 aa12.73□□□□□ -0.37
LTBR-203ENST00000441074 MAEAQ7L5Y9 396 aa12.73□□□□□ -0.37
LTBR-203ENST00000441074 GPC2Q8N158 579 aa12.73□□□□□ -0.37
LTBR-203ENST00000441074 PRELID2Q8N945 189 aa12.73□□□□□ -0.37
LTBR-203ENST00000441074 ANKLE1Q8NAG6 615 aa12.73□□□□□ -0.37
LTBR-203ENST00000441074 CTNNBL1Q8WYA6 563 aaPredicted RBP12.73□□□□□ -0.37
LTBR-203ENST00000441074 TMEM237Q96Q45 408 aa12.73□□□□□ -0.37
LTBR-203ENST00000441074 AJAP1Q9UKB5 411 aaPredicted RBP12.73□□□□□ -0.37
LTBR-203ENST00000441074 TRAF3IP3Q9Y228 551 aa12.73□□□□□ -0.37
LTBR-203ENST00000441074 SPDYE5A6NIY4 337 aa12.73□□□□□ -0.37
LTBR-203ENST00000441074 EIF4E1BA6NMX2 242 aaKnown RBP12.73□□□□□ -0.37
LTBR-203ENST00000441074 USP17L15C9J2P7 530 aa12.73□□□□□ -0.37
LTBR-203ENST00000441074 USP17L13C9JLJ4 530 aa12.73□□□□□ -0.37
LTBR-203ENST00000441074 USP17L11C9JVI0 530 aa12.73□□□□□ -0.37
LTBR-203ENST00000441074 USP17L18D6R9N7 530 aa12.73□□□□□ -0.37
LTBR-203ENST00000441074 USP17L22D6RA61 530 aa12.73□□□□□ -0.37
LTBR-203ENST00000441074 USP17L17D6RBQ6 530 aa12.73□□□□□ -0.37
LTBR-203ENST00000441074 USP17L19D6RCP7 530 aa12.73□□□□□ -0.37
LTBR-203ENST00000441074 USP17L20D6RJB6 530 aa12.73□□□□□ -0.37
LTBR-203ENST00000441074 XRCC5P13010 732 aaKnown RBP12.73□□□□□ -0.37
LTBR-203ENST00000441074 ALDH3A1P30838 453 aa12.73□□□□□ -0.37
LTBR-203ENST00000441074 USP17L24Q0WX57 530 aa12.73□□□□□ -0.37
LTBR-203ENST00000441074 MTFR1Q15390 333 aa12.73□□□□□ -0.37
LTBR-203ENST00000441074 USP17L6PQ6QN14 398 aa12.73□□□□□ -0.37
LTBR-203ENST00000441074 CYFIP1Q7L576 1253 aa12.73□□□□□ -0.37
LTBR-203ENST00000441074 GPBP1Q86WP2 473 aa12.73□□□□□ -0.37
LTBR-203ENST00000441074 ECHDC2Q86YB7 292 aa12.73□□□□□ -0.37
LTBR-203ENST00000441074 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.73□□□□□ -0.37
LTBR-203ENST00000441074 SH3TC2Q8TF17 1288 aa12.73□□□□□ -0.37
LTBR-203ENST00000441074 ALG3Q92685 438 aa12.73□□□□□ -0.37
LTBR-203ENST00000441074 MAGEB18Q96M61 343 aa12.73□□□□□ -0.37
LTBR-203ENST00000441074 TGS1Q96RS0 853 aaKnown RBP12.73□□□□□ -0.37
LTBR-203ENST00000441074 SYT15Q9BQS2 421 aa12.73□□□□□ -0.37
LTBR-203ENST00000441074 SYNGAP1Q96PV0 1343 aa12.73□□□□□ -0.37
LTBR-203ENST00000441074 SIPA1L1O43166 1804 aa12.72□□□□□ -0.37
LTBR-203ENST00000441074 PFASO15067 1338 aa12.72□□□□□ -0.37
LTBR-203ENST00000441074 GLTPD2A6NH11 291 aa12.72□□□□□ -0.37
LTBR-203ENST00000441074 TULP1O00294 542 aaPredicted RBP12.72□□□□□ -0.37
LTBR-203ENST00000441074 UPP2O95045 317 aa12.72□□□□□ -0.37
LTBR-203ENST00000441074 EYA4O95677 639 aa12.72□□□□□ -0.37
LTBR-203ENST00000441074 GGPS1O95749 300 aa12.72□□□□□ -0.37
LTBR-203ENST00000441074 CREB1P16220 341 aa12.72□□□□□ -0.37
LTBR-203ENST00000441074 KLC1Q07866 573 aa12.72□□□□□ -0.37
LTBR-203ENST00000441074 LONRF1Q17RB8 773 aa12.72□□□□□ -0.37
LTBR-203ENST00000441074 TSNAXIP1Q2TAA8 658 aa12.72□□□□□ -0.37
LTBR-203ENST00000441074 GPATCH4Q5T3I0 446 aaKnown RBP12.72□□□□□ -0.37
LTBR-203ENST00000441074 ANKRD42Q8N9B4 389 aa12.72□□□□□ -0.37
LTBR-203ENST00000441074 ASAP3Q8TDY4 903 aa12.72□□□□□ -0.37
LTBR-203ENST00000441074 ZNF526Q8TF50 670 aaPredicted RBP12.72□□□□□ -0.37
LTBR-203ENST00000441074 INPP5DQ92835 1189 aa12.72□□□□□ -0.37
LTBR-203ENST00000441074 KCNK9Q9NPC2 374 aa12.72□□□□□ -0.37
LTBR-203ENST00000441074 NYAP2Q9P242 653 aa12.72□□□□□ -0.37
LTBR-203ENST00000441074 ZMYND8Q9ULU4 1186 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms