RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 TSPYL2Q9H2G4 693 aaPredicted RBP15.86■□□□□ 0.13
TNFRSF1A-204ENST00000440083 TRAF3IP3Q9Y228 551 aa15.86■□□□□ 0.13
TNFRSF1A-204ENST00000440083 USP20Q9Y2K6 914 aa15.86■□□□□ 0.13
TNFRSF1A-204ENST00000440083 PCDHB13Q9Y5F0 798 aa15.86■□□□□ 0.13
TNFRSF1A-204ENST00000440083 CHD9Q3L8U1 2897 aa15.85■□□□□ 0.13
TNFRSF1A-204ENST00000440083 TTC3P53804 2025 aa15.85■□□□□ 0.13
TNFRSF1A-204ENST00000440083 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.85■□□□□ 0.13
TNFRSF1A-204ENST00000440083 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.85■□□□□ 0.13
TNFRSF1A-204ENST00000440083 DENND3A2RUS2 1198 aa15.85■□□□□ 0.13
TNFRSF1A-204ENST00000440083 LCHNA4D1U4 455 aa15.85■□□□□ 0.13
TNFRSF1A-204ENST00000440083 INO80B-WBP1J3KQ70 363 aa15.85■□□□□ 0.13
TNFRSF1A-204ENST00000440083 B4GALT5O43286 388 aa15.85■□□□□ 0.13
TNFRSF1A-204ENST00000440083 STX10O60499 249 aa15.85■□□□□ 0.13
TNFRSF1A-204ENST00000440083 ARHGEF15O94989 841 aa15.85■□□□□ 0.13
TNFRSF1A-204ENST00000440083 GYPCP04921 128 aa15.85■□□□□ 0.13
TNFRSF1A-204ENST00000440083 EDN1P05305 212 aa15.85■□□□□ 0.13
TNFRSF1A-204ENST00000440083 MAPTP10636 758 aaKnown RBP15.85■□□□□ 0.13
TNFRSF1A-204ENST00000440083 EPB41P11171 864 aaKnown RBP15.85■□□□□ 0.13
TNFRSF1A-204ENST00000440083 CASP14P31944 242 aa15.85■□□□□ 0.13
TNFRSF1A-204ENST00000440083 GATMP50440 423 aa15.85■□□□□ 0.13
TNFRSF1A-204ENST00000440083 PEX3P56589 373 aa15.85■□□□□ 0.13
TNFRSF1A-204ENST00000440083 SMAD3P84022 425 aaKnown RBP15.85■□□□□ 0.13
TNFRSF1A-204ENST00000440083 ADAM9Q13443 819 aa15.85■□□□□ 0.13
TNFRSF1A-204ENST00000440083 SYCP1Q15431 976 aa15.85■□□□□ 0.13
TNFRSF1A-204ENST00000440083 AMHR2Q16671 573 aa15.85■□□□□ 0.13
TNFRSF1A-204ENST00000440083 TSR1Q2NL82 804 aaKnown RBP15.85■□□□□ 0.13
TNFRSF1A-204ENST00000440083 CDCA2Q69YH5 1023 aaPredicted RBP15.85■□□□□ 0.13
TNFRSF1A-204ENST00000440083 HS2ST1Q7LGA3 356 aa15.85■□□□□ 0.13
TNFRSF1A-204ENST00000440083 SRGAP1Q7Z6B7 1085 aa15.85■□□□□ 0.13
TNFRSF1A-204ENST00000440083 IFNLR1Q8IU57 520 aaPredicted RBP15.85■□□□□ 0.13
TNFRSF1A-204ENST00000440083 SLC17A8Q8NDX2 589 aa15.85■□□□□ 0.13
TNFRSF1A-204ENST00000440083 GOLGA5Q8TBA6 731 aa15.85■□□□□ 0.13
TNFRSF1A-204ENST00000440083 FTHL17Q9BXU8 183 aa15.85■□□□□ 0.13
TNFRSF1A-204ENST00000440083 INO80BQ9C086 356 aaPredicted RBP15.85■□□□□ 0.13
TNFRSF1A-204ENST00000440083 NKX2-4Q9H2Z4 354 aa15.85■□□□□ 0.13
TNFRSF1A-204ENST00000440083 NDST4Q9H3R1 872 aa15.85■□□□□ 0.13
TNFRSF1A-204ENST00000440083 PIN4Q9Y237 131 aaKnown RBP15.85■□□□□ 0.13
TNFRSF1A-204ENST00000440083 COL4A6Q14031 1691 aa15.85■□□□□ 0.13
TNFRSF1A-204ENST00000440083 TTLL13PA6NNM8 815 aa15.84■□□□□ 0.13
TNFRSF1A-204ENST00000440083 CCDC169A6NNP5 214 aa15.84■□□□□ 0.13
TNFRSF1A-204ENST00000440083 SLC16A3O15427 465 aaKnown RBP15.84■□□□□ 0.13
TNFRSF1A-204ENST00000440083 TSPAN1O60635 241 aa15.84■□□□□ 0.13
TNFRSF1A-204ENST00000440083 NR3C1P04150 777 aa15.84■□□□□ 0.13
TNFRSF1A-204ENST00000440083 PLS3P13797 630 aa15.84■□□□□ 0.13
TNFRSF1A-204ENST00000440083 TRIM21P19474 475 aaKnown RBP15.84■□□□□ 0.13
TNFRSF1A-204ENST00000440083 DNAJB2P25686 324 aa15.84■□□□□ 0.13
TNFRSF1A-204ENST00000440083 NAMPTP43490 491 aa15.84■□□□□ 0.13
TNFRSF1A-204ENST00000440083 NPTX2P47972 431 aa15.84■□□□□ 0.13
TNFRSF1A-204ENST00000440083 PPP2R3AQ06190 1150 aa15.84■□□□□ 0.13
TNFRSF1A-204ENST00000440083 MIIPQ5JXC2 388 aa15.84■□□□□ 0.13
TNFRSF1A-204ENST00000440083 SPRED2Q7Z698 418 aa15.84■□□□□ 0.13
TNFRSF1A-204ENST00000440083 SYCP3Q8IZU3 236 aa15.84■□□□□ 0.13
TNFRSF1A-204ENST00000440083 CCAR2Q8N163 923 aaKnown RBP15.84■□□□□ 0.13
TNFRSF1A-204ENST00000440083 DEPTORQ8TB45 409 aa15.84■□□□□ 0.13
TNFRSF1A-204ENST00000440083 PHOSPHO2Q8TCD6 241 aa15.84■□□□□ 0.13
TNFRSF1A-204ENST00000440083 CPB2Q96IY4 423 aa15.84■□□□□ 0.13
TNFRSF1A-204ENST00000440083 IFT74Q96LB3 600 aa15.84■□□□□ 0.13
TNFRSF1A-204ENST00000440083 ERGIC2Q96RQ1 377 aa15.84■□□□□ 0.13
TNFRSF1A-204ENST00000440083 RGS18Q9NS28 235 aa15.84■□□□□ 0.13
TNFRSF1A-204ENST00000440083 KCND1Q9NSA2 647 aa15.84■□□□□ 0.13
TNFRSF1A-204ENST00000440083 AGPAT5Q9NUQ2 364 aa15.84■□□□□ 0.13
TNFRSF1A-204ENST00000440083 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.84■□□□□ 0.13
TNFRSF1A-204ENST00000440083 C9IYK1 514 aa15.83■□□□□ 0.12
TNFRSF1A-204ENST00000440083 SLC16A4O15374 487 aa15.83■□□□□ 0.12
TNFRSF1A-204ENST00000440083 ZSCAN12O43309 604 aa15.83■□□□□ 0.12
TNFRSF1A-204ENST00000440083 GJB5O95377 273 aa15.83■□□□□ 0.12
TNFRSF1A-204ENST00000440083 HOXA11P31270 313 aaPredicted RBP15.83■□□□□ 0.12
TNFRSF1A-204ENST00000440083 MARSP56192 900 aaKnown RBP15.83■□□□□ 0.12
TNFRSF1A-204ENST00000440083 PPP2R5AQ15172 486 aa15.83■□□□□ 0.12
TNFRSF1A-204ENST00000440083 CEP135Q66GS9 1140 aa15.83■□□□□ 0.12
TNFRSF1A-204ENST00000440083 ZNF720Q7Z2F6 126 aa15.83■□□□□ 0.12
TNFRSF1A-204ENST00000440083 CDR2LQ86X02 465 aaPredicted RBP15.83■□□□□ 0.12
TNFRSF1A-204ENST00000440083 ZBTB8OSQ8IWT0 167 aa15.83■□□□□ 0.12
TNFRSF1A-204ENST00000440083 TOP1MTQ969P6 601 aa15.83■□□□□ 0.12
TNFRSF1A-204ENST00000440083 ZBED2Q9BTP6 218 aa15.83■□□□□ 0.12
TNFRSF1A-204ENST00000440083 NFKBIZQ9BYH8 718 aa15.83■□□□□ 0.12
TNFRSF1A-204ENST00000440083 CCDC113Q9H0I3 377 aa15.83■□□□□ 0.12
TNFRSF1A-204ENST00000440083 TMEM206Q9H813 350 aa15.83■□□□□ 0.12
TNFRSF1A-204ENST00000440083 METTL14Q9HCE5 456 aaKnown RBP15.83■□□□□ 0.12
TNFRSF1A-204ENST00000440083 LUC7L2Q9Y383 392 aaKnown RBP15.83■□□□□ 0.12
TNFRSF1A-204ENST00000440083 ZMYM2Q9UBW7 1377 aa15.83■□□□□ 0.12
TNFRSF1A-204ENST00000440083 KIF2AO00139 706 aaPredicted RBP15.82■□□□□ 0.12
TNFRSF1A-204ENST00000440083 TLL1O43897 1013 aa15.82■□□□□ 0.12
TNFRSF1A-204ENST00000440083 ERLIN2O94905 339 aa15.82■□□□□ 0.12
TNFRSF1A-204ENST00000440083 PRKCBP05771 671 aa15.82■□□□□ 0.12
TNFRSF1A-204ENST00000440083 CA3P07451 260 aa15.82■□□□□ 0.12
TNFRSF1A-204ENST00000440083 KRT9P35527 623 aa15.82■□□□□ 0.12
TNFRSF1A-204ENST00000440083 POU5F1BQ06416 359 aa15.82■□□□□ 0.12
TNFRSF1A-204ENST00000440083 DMP1Q13316 513 aaPredicted RBP15.82■□□□□ 0.12
TNFRSF1A-204ENST00000440083 NFIL3Q16649 462 aa15.82■□□□□ 0.12
TNFRSF1A-204ENST00000440083 ZC2HC1CQ53FD0 456 aaPredicted RBP15.82■□□□□ 0.12
TNFRSF1A-204ENST00000440083 UBXN11Q5T124 520 aa15.82■□□□□ 0.12
TNFRSF1A-204ENST00000440083 TWF2Q6IBS0 349 aaKnown RBP15.82■□□□□ 0.12
TNFRSF1A-204ENST00000440083 Q7L0L9 218 aa15.82■□□□□ 0.12
TNFRSF1A-204ENST00000440083 TAS1R3Q7RTX0 852 aa15.82■□□□□ 0.12
TNFRSF1A-204ENST00000440083 FRMD5Q7Z6J6 570 aa15.82■□□□□ 0.12
TNFRSF1A-204ENST00000440083 TMEM139Q8IV31 216 aa15.82■□□□□ 0.12
TNFRSF1A-204ENST00000440083 RNF169Q8NCN4 708 aa15.82■□□□□ 0.12
TNFRSF1A-204ENST00000440083 ZNF397Q8NF99 534 aaPredicted RBP15.82■□□□□ 0.12
TNFRSF1A-204ENST00000440083 TIFAQ96CG3 184 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms