RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 CNPY4Q8N129 248 aa14.53□□□□□ -0.08
HERPUD1-204ENST00000439977 HELQQ8TDG4 1101 aa14.53□□□□□ -0.08
HERPUD1-204ENST00000439977 WNK4Q96J92 1243 aa14.53□□□□□ -0.08
HERPUD1-204ENST00000439977 RMDN3Q96TC7 470 aa14.53□□□□□ -0.08
HERPUD1-204ENST00000439977 ADAM7Q9H2U9 754 aa14.53□□□□□ -0.08
HERPUD1-204ENST00000439977 CD248Q9HCU0 757 aa14.53□□□□□ -0.08
HERPUD1-204ENST00000439977 ANAPC7Q9UJX3 599 aa14.53□□□□□ -0.08
HERPUD1-204ENST00000439977 PCDHA3Q9Y5H8 950 aa14.53□□□□□ -0.08
HERPUD1-204ENST00000439977 O00370 1275 aa14.53□□□□□ -0.08
HERPUD1-204ENST00000439977 DRD4P21917 467 aa14.53□□□□□ -0.08
HERPUD1-204ENST00000439977 RFX1P22670 979 aa14.53□□□□□ -0.08
HERPUD1-204ENST00000439977 PDE6CP51160 858 aa14.53□□□□□ -0.08
HERPUD1-204ENST00000439977 KRT39Q6A163 491 aa14.53□□□□□ -0.08
HERPUD1-204ENST00000439977 ANO5Q75V66 913 aa14.53□□□□□ -0.08
HERPUD1-204ENST00000439977 SV2AQ7L0J3 742 aa14.53□□□□□ -0.08
HERPUD1-204ENST00000439977 PRUNE1Q86TP1 453 aa14.53□□□□□ -0.08
HERPUD1-204ENST00000439977 TAX1BP1Q86VP1 789 aa14.53□□□□□ -0.08
HERPUD1-204ENST00000439977 DHX37Q8IY37 1157 aaKnown RBP14.53□□□□□ -0.08
HERPUD1-204ENST00000439977 TMEM161BQ8NDZ6 487 aa14.53□□□□□ -0.08
HERPUD1-204ENST00000439977 CD101Q93033 1021 aa14.53□□□□□ -0.08
HERPUD1-204ENST00000439977 CHMP6Q96FZ7 201 aa14.53□□□□□ -0.08
HERPUD1-204ENST00000439977 FAM213AQ9BRX8 229 aa14.53□□□□□ -0.08
HERPUD1-204ENST00000439977 HERPUD2Q9BSE4 406 aa14.53□□□□□ -0.08
HERPUD1-204ENST00000439977 CHST7Q9NS84 486 aa14.53□□□□□ -0.08
HERPUD1-204ENST00000439977 MTRF1LQ9UGC7 380 aaKnown RBP14.53□□□□□ -0.08
HERPUD1-204ENST00000439977 VIMP08670 466 aaKnown RBP14.52□□□□□ -0.08
HERPUD1-204ENST00000439977 SPDYE2Q495Y8 402 aa14.52□□□□□ -0.08
HERPUD1-204ENST00000439977 ERMARDQ5T6L9 678 aa14.52□□□□□ -0.08
HERPUD1-204ENST00000439977 PASD1Q8IV76 773 aa14.52□□□□□ -0.08
HERPUD1-204ENST00000439977 FMNL3Q8IVF7 1028 aa14.52□□□□□ -0.08
HERPUD1-204ENST00000439977 SHC3Q92529 594 aa14.52□□□□□ -0.08
HERPUD1-204ENST00000439977 WNT8AQ9H1J5 351 aa14.52□□□□□ -0.08
HERPUD1-204ENST00000439977 KMT5AQ9NQR1 393 aa14.52□□□□□ -0.08
HERPUD1-204ENST00000439977 RAB20Q9NX57 234 aa14.52□□□□□ -0.08
HERPUD1-204ENST00000439977 CTNNAL1Q9UBT7 734 aa14.52□□□□□ -0.08
HERPUD1-204ENST00000439977 ASIC3Q9UHC3 531 aa14.52□□□□□ -0.08
HERPUD1-204ENST00000439977 PCYOX1Q9UHG3 505 aa14.52□□□□□ -0.08
HERPUD1-204ENST00000439977 MTUS1Q9ULD2 1270 aa14.52□□□□□ -0.08
HERPUD1-204ENST00000439977 UBIAD1Q9Y5Z9 338 aa14.52□□□□□ -0.08
HERPUD1-204ENST00000439977 RIPK2O43353 540 aa14.52□□□□□ -0.09
HERPUD1-204ENST00000439977 NUDT17P0C025 328 aa14.52□□□□□ -0.09
HERPUD1-204ENST00000439977 RWDD2BP57060 319 aa14.52□□□□□ -0.09
HERPUD1-204ENST00000439977 SIX1Q15475 284 aaPredicted RBP14.52□□□□□ -0.09
HERPUD1-204ENST00000439977 PPP2R5EQ16537 467 aa14.52□□□□□ -0.09
HERPUD1-204ENST00000439977 SGO2Q562F6 1265 aa14.52□□□□□ -0.09
HERPUD1-204ENST00000439977 SPOPLQ6IQ16 392 aa14.52□□□□□ -0.09
HERPUD1-204ENST00000439977 YTHDF3Q7Z739 585 aaKnown RBP14.52□□□□□ -0.09
HERPUD1-204ENST00000439977 CEP170P1Q96L14 293 aa14.52□□□□□ -0.09
HERPUD1-204ENST00000439977 RPS6KC1Q96S38 1066 aa14.52□□□□□ -0.09
HERPUD1-204ENST00000439977 JPH2Q9BR39 696 aaPredicted RBP14.52□□□□□ -0.09
HERPUD1-204ENST00000439977 INTS9Q9NV88 658 aaKnown RBP14.52□□□□□ -0.09
HERPUD1-204ENST00000439977 HAUS2Q9NVX0 235 aa14.52□□□□□ -0.09
HERPUD1-204ENST00000439977 FZD1Q9UP38 647 aa14.52□□□□□ -0.09
HERPUD1-204ENST00000439977 RIPK3Q9Y572 518 aa14.52□□□□□ -0.09
HERPUD1-204ENST00000439977 CD2APQ9Y5K6 639 aa14.52□□□□□ -0.09
HERPUD1-204ENST00000439977 PFASO15067 1338 aa14.52□□□□□ -0.09
HERPUD1-204ENST00000439977 PODXLO00592 558 aa14.52□□□□□ -0.09
HERPUD1-204ENST00000439977 HGSO14964 777 aaPredicted RBP14.52□□□□□ -0.09
HERPUD1-204ENST00000439977 HNRNPDLO14979 420 aaKnown RBP14.52□□□□□ -0.09
HERPUD1-204ENST00000439977 ASNSP08243 561 aa14.52□□□□□ -0.09
HERPUD1-204ENST00000439977 CHKAP35790 457 aa14.52□□□□□ -0.09
HERPUD1-204ENST00000439977 CDR2Q01850 454 aa14.52□□□□□ -0.09
HERPUD1-204ENST00000439977 DMP1Q13316 513 aaPredicted RBP14.52□□□□□ -0.09
HERPUD1-204ENST00000439977 PGM5Q15124 567 aa14.52□□□□□ -0.09
HERPUD1-204ENST00000439977 SLC39A4Q6P5W5 647 aa14.52□□□□□ -0.09
HERPUD1-204ENST00000439977 LRRC34Q8IZ02 419 aa14.52□□□□□ -0.09
HERPUD1-204ENST00000439977 FBXL13Q8NEE6 735 aa14.52□□□□□ -0.09
HERPUD1-204ENST00000439977 BICD1Q96G01 975 aa14.52□□□□□ -0.09
HERPUD1-204ENST00000439977 NT5C1BQ96P26 610 aa14.52□□□□□ -0.09
HERPUD1-204ENST00000439977 ELAC2Q9BQ52 826 aaKnown RBP14.52□□□□□ -0.09
HERPUD1-204ENST00000439977 PAGR1Q9BTK6 254 aa14.52□□□□□ -0.09
HERPUD1-204ENST00000439977 ADGRA3Q8IWK6 1321 aa14.51□□□□□ -0.09
HERPUD1-204ENST00000439977 RASGRF2O14827 1237 aa14.51□□□□□ -0.09
HERPUD1-204ENST00000439977 EGFRP00533 1210 aa14.51□□□□□ -0.09
HERPUD1-204ENST00000439977 CFHP08603 1231 aa14.51□□□□□ -0.09
HERPUD1-204ENST00000439977 GZMAP12544 262 aa14.51□□□□□ -0.09
HERPUD1-204ENST00000439977 MAPK4P31152 587 aa14.51□□□□□ -0.09
HERPUD1-204ENST00000439977 HADHBP55084 474 aaKnown RBP14.51□□□□□ -0.09
HERPUD1-204ENST00000439977 KRT17Q04695 432 aa14.51□□□□□ -0.09
HERPUD1-204ENST00000439977 MYBPC2Q14324 1141 aa14.51□□□□□ -0.09
HERPUD1-204ENST00000439977 PCNX4Q63HM2 1172 aa14.51□□□□□ -0.09
HERPUD1-204ENST00000439977 SLC40A1Q9NP59 571 aa14.51□□□□□ -0.09
HERPUD1-204ENST00000439977 CTDP1Q9Y5B0 961 aaPredicted RBP14.51□□□□□ -0.09
HERPUD1-204ENST00000439977 GJB6O95452 261 aa14.51□□□□□ -0.09
HERPUD1-204ENST00000439977 ECEL1O95672 775 aa14.51□□□□□ -0.09
HERPUD1-204ENST00000439977 SCP2P22307 547 aa14.51□□□□□ -0.09
HERPUD1-204ENST00000439977 RRM1P23921 792 aa14.51□□□□□ -0.09
HERPUD1-204ENST00000439977 SSR1P43307 286 aaKnown RBP14.51□□□□□ -0.09
HERPUD1-204ENST00000439977 SMTNP53814 917 aa14.51□□□□□ -0.09
HERPUD1-204ENST00000439977 PSMC5P62195 406 aa14.51□□□□□ -0.09
HERPUD1-204ENST00000439977 CALCOCO2Q13137 446 aa14.51□□□□□ -0.09
HERPUD1-204ENST00000439977 ARHGEF16Q5VV41 709 aa14.51□□□□□ -0.09
HERPUD1-204ENST00000439977 CYFIP1Q7L576 1253 aa14.51□□□□□ -0.09
HERPUD1-204ENST00000439977 FAM129AQ9BZQ8 928 aa14.51□□□□□ -0.09
HERPUD1-204ENST00000439977 GABBR1Q9UBS5 961 aa14.51□□□□□ -0.09
HERPUD1-204ENST00000439977 TBK1Q9UHD2 729 aa14.51□□□□□ -0.09
HERPUD1-204ENST00000439977 P4HA2O15460 535 aa14.5□□□□□ -0.09
HERPUD1-204ENST00000439977 GRIN3BO60391 1043 aa14.5□□□□□ -0.09
HERPUD1-204ENST00000439977 NF2P35240 595 aa14.5□□□□□ -0.09
HERPUD1-204ENST00000439977 DRG2P55039 364 aaKnown RBP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms