RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 MRPL4Q9BYD3 311 aaKnown RBP12.71□□□□□ -0.38
SMAD3-202ENST00000439724 KATNBL1Q9H079 304 aa12.71□□□□□ -0.38
SMAD3-202ENST00000439724 ARFGAP3Q9NP61 516 aa12.71□□□□□ -0.38
SMAD3-202ENST00000439724 ERAP1Q9NZ08 941 aa12.71□□□□□ -0.38
SMAD3-202ENST00000439724 NOCTQ9UK39 431 aaKnown RBP12.71□□□□□ -0.38
SMAD3-202ENST00000439724 ANKRD62A6NC57 917 aa12.7□□□□□ -0.38
SMAD3-202ENST00000439724 C4BPAP04003 597 aaKnown RBP12.7□□□□□ -0.38
SMAD3-202ENST00000439724 PAFAH1B1P43034 410 aa12.7□□□□□ -0.38
SMAD3-202ENST00000439724 NOP2P46087 812 aaKnown RBP12.7□□□□□ -0.38
SMAD3-202ENST00000439724 ACOT2P49753 483 aa12.7□□□□□ -0.38
SMAD3-202ENST00000439724 HADHBP55084 474 aaKnown RBP12.7□□□□□ -0.38
SMAD3-202ENST00000439724 TFDP1Q14186 410 aa12.7□□□□□ -0.38
SMAD3-202ENST00000439724 GRB14Q14449 540 aa12.7□□□□□ -0.38
SMAD3-202ENST00000439724 TCEAL1Q15170 157 aa12.7□□□□□ -0.38
SMAD3-202ENST00000439724 FAM110CQ1W6H9 321 aa12.7□□□□□ -0.38
SMAD3-202ENST00000439724 TMEM63BQ5T3F8 832 aa12.7□□□□□ -0.38
SMAD3-202ENST00000439724 CCDC181Q5TID7 509 aa12.7□□□□□ -0.38
SMAD3-202ENST00000439724 DNAAF5Q86Y56 855 aa12.7□□□□□ -0.38
SMAD3-202ENST00000439724 PALB2Q86YC2 1186 aa12.7□□□□□ -0.38
SMAD3-202ENST00000439724 BRSK2Q8IWQ3 736 aa12.7□□□□□ -0.38
SMAD3-202ENST00000439724 CALR3Q96L12 384 aaKnown RBP12.7□□□□□ -0.38
SMAD3-202ENST00000439724 CGRRF1Q99675 332 aa12.7□□□□□ -0.38
SMAD3-202ENST00000439724 ISCUQ9H1K1 167 aa12.7□□□□□ -0.38
SMAD3-202ENST00000439724 SUGCTQ9HAC7 445 aa12.7□□□□□ -0.38
SMAD3-202ENST00000439724 C1orf112Q9NSG2 853 aa12.7□□□□□ -0.38
SMAD3-202ENST00000439724 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.7□□□□□ -0.38
SMAD3-202ENST00000439724 RBAKQ9NYW8 714 aaPredicted RBP12.7□□□□□ -0.38
SMAD3-202ENST00000439724 ANKFY1Q9P2R3 1169 aa12.7□□□□□ -0.38
SMAD3-202ENST00000439724 TRPC6Q9Y210 931 aa12.7□□□□□ -0.38
SMAD3-202ENST00000439724 CNTNAP2Q9UHC6 1331 aa12.7□□□□□ -0.38
SMAD3-202ENST00000439724 ASAP2O43150 1006 aa12.69□□□□□ -0.38
SMAD3-202ENST00000439724 ERLIN1O75477 346 aa12.69□□□□□ -0.38
SMAD3-202ENST00000439724 TOM1L1O75674 476 aa12.69□□□□□ -0.38
SMAD3-202ENST00000439724 KIF4AO95239 1232 aa12.69□□□□□ -0.38
SMAD3-202ENST00000439724 CELF2O95319 508 aaKnown RBP12.69□□□□□ -0.38
SMAD3-202ENST00000439724 HLA-DRAP01903 254 aa12.69□□□□□ -0.38
SMAD3-202ENST00000439724 LGALS2P05162 132 aa12.69□□□□□ -0.38
SMAD3-202ENST00000439724 PRKCBP05771 671 aa12.69□□□□□ -0.38
SMAD3-202ENST00000439724 GZMAP12544 262 aa12.69□□□□□ -0.38
SMAD3-202ENST00000439724 CHRNB2P17787 502 aa12.69□□□□□ -0.38
SMAD3-202ENST00000439724 TNNI1P19237 187 aa12.69□□□□□ -0.38
SMAD3-202ENST00000439724 MCM3P25205 808 aa12.69□□□□□ -0.38
SMAD3-202ENST00000439724 CXCR5P32302 372 aa12.69□□□□□ -0.38
SMAD3-202ENST00000439724 USP8P40818 1118 aa12.69□□□□□ -0.38
SMAD3-202ENST00000439724 MATR3P43243 847 aaKnown RBP eCLIP12.69□□□□□ -0.38
SMAD3-202ENST00000439724 WNT7BP56706 349 aa12.69□□□□□ -0.38
SMAD3-202ENST00000439724 C2orf54Q08AI8 447 aa12.69□□□□□ -0.38
SMAD3-202ENST00000439724 MKRN3Q13064 507 aaKnown RBP12.69□□□□□ -0.38
SMAD3-202ENST00000439724 GRM1Q13255 1194 aa12.69□□□□□ -0.38
SMAD3-202ENST00000439724 RPS6KA1Q15418 735 aa12.69□□□□□ -0.38
SMAD3-202ENST00000439724 MAPK6Q16659 721 aa12.69□□□□□ -0.38
SMAD3-202ENST00000439724 CFAP221Q4G0U5 840 aa12.69□□□□□ -0.38
SMAD3-202ENST00000439724 ZNF484Q5JVG2 852 aa12.69□□□□□ -0.38
SMAD3-202ENST00000439724 TDRD10Q5VZ19 366 aaKnown RBP12.69□□□□□ -0.38
SMAD3-202ENST00000439724 GPR142Q7Z601 462 aa12.69□□□□□ -0.38
SMAD3-202ENST00000439724 NOP9Q86U38 636 aaKnown RBP12.69□□□□□ -0.38
SMAD3-202ENST00000439724 RPUSD2Q8IZ73 545 aaKnown RBP12.69□□□□□ -0.38
SMAD3-202ENST00000439724 LRRC71Q8N4P6 559 aa12.69□□□□□ -0.38
SMAD3-202ENST00000439724 RNF149Q8NC42 400 aa12.69□□□□□ -0.38
SMAD3-202ENST00000439724 SPATA4Q8NEY3 305 aa12.69□□□□□ -0.38
SMAD3-202ENST00000439724 PPTC7Q8NI37 304 aa12.69□□□□□ -0.38
SMAD3-202ENST00000439724 RUBCNQ92622 972 aa12.69□□□□□ -0.38
SMAD3-202ENST00000439724 TATDN2Q93075 761 aa12.69□□□□□ -0.38
SMAD3-202ENST00000439724 ACO2Q99798 780 aaKnown RBP12.69□□□□□ -0.38
SMAD3-202ENST00000439724 PDE11AQ9HCR9 933 aa12.69□□□□□ -0.38
SMAD3-202ENST00000439724 SEPT11Q9NVA2 429 aaKnown RBP12.69□□□□□ -0.38
SMAD3-202ENST00000439724 SUCLA2Q9P2R7 463 aaPredicted RBP12.69□□□□□ -0.38
SMAD3-202ENST00000439724 STXBP5LQ9Y2K9 1186 aa12.69□□□□□ -0.38
SMAD3-202ENST00000439724 COL1A2P08123 1366 aa12.69□□□□□ -0.38
SMAD3-202ENST00000439724 ABLIM1O14639 778 aa12.68□□□□□ -0.38
SMAD3-202ENST00000439724 CLDN3O15551 220 aa12.68□□□□□ -0.38
SMAD3-202ENST00000439724 CYP26A1O43174 497 aa12.68□□□□□ -0.38
SMAD3-202ENST00000439724 FAM189A1O60320 539 aa12.68□□□□□ -0.38
SMAD3-202ENST00000439724 RTN2O75298 545 aa12.68□□□□□ -0.38
SMAD3-202ENST00000439724 SEC31AO94979 1220 aaKnown RBP12.68□□□□□ -0.38
SMAD3-202ENST00000439724 SGPL1O95470 568 aa12.68□□□□□ -0.38
SMAD3-202ENST00000439724 C22orf31O95567 290 aa12.68□□□□□ -0.38
SMAD3-202ENST00000439724 SNAI1O95863 264 aaPredicted RBP12.68□□□□□ -0.38
SMAD3-202ENST00000439724 CYP11B1P15538 503 aa12.68□□□□□ -0.38
SMAD3-202ENST00000439724 MAPK4P31152 587 aa12.68□□□□□ -0.38
SMAD3-202ENST00000439724 PIK3CAP42336 1068 aa12.68□□□□□ -0.38
SMAD3-202ENST00000439724 AP3M2P53677 418 aa12.68□□□□□ -0.38
SMAD3-202ENST00000439724 VSNL1P62760 191 aa12.68□□□□□ -0.38
SMAD3-202ENST00000439724 POU5F1BQ06416 359 aa12.68□□□□□ -0.38
SMAD3-202ENST00000439724 MCL1Q07820 350 aa12.68□□□□□ -0.38
SMAD3-202ENST00000439724 ZBTB41Q5SVQ8 909 aa12.68□□□□□ -0.38
SMAD3-202ENST00000439724 CCDC70Q6NSX1 233 aa12.68□□□□□ -0.38
SMAD3-202ENST00000439724 RHOT2Q8IXI1 618 aa12.68□□□□□ -0.38
SMAD3-202ENST00000439724 TAF4BQ92750 862 aa12.68□□□□□ -0.38
SMAD3-202ENST00000439724 PBKQ96KB5 322 aa12.68□□□□□ -0.38
SMAD3-202ENST00000439724 PSMB7Q99436 277 aa12.68□□□□□ -0.38
SMAD3-202ENST00000439724 NFKBIZQ9BYH8 718 aa12.68□□□□□ -0.38
SMAD3-202ENST00000439724 ABCB6Q9NP58 842 aa12.68□□□□□ -0.38
SMAD3-202ENST00000439724 TAS2R14Q9NYV8 317 aa12.68□□□□□ -0.38
SMAD3-202ENST00000439724 PTPRJQ12913 1337 aa12.68□□□□□ -0.38
SMAD3-202ENST00000439724 TRPM7Q96QT4 1865 aa12.68□□□□□ -0.38
SMAD3-202ENST00000439724 TMCO5BA8MYB1 307 aa12.67□□□□□ -0.38
SMAD3-202ENST00000439724 OGTO15294 1046 aa12.67□□□□□ -0.38
SMAD3-202ENST00000439724 MAGEB2O15479 319 aa12.67□□□□□ -0.38
SMAD3-202ENST00000439724 VNN1O95497 513 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms