RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 EIF3DO15371 548 aaKnown RBP eCLIP6.76□□□□□ -1.33
BDNF-211ENST00000439476 CHN1P15882 459 aa6.76□□□□□ -1.33
BDNF-211ENST00000439476 SERPINB6P35237 376 aa6.76□□□□□ -1.33
BDNF-211ENST00000439476 ARL4AP40617 200 aa6.76□□□□□ -1.33
BDNF-211ENST00000439476 CBX3Q13185 183 aa6.76□□□□□ -1.33
BDNF-211ENST00000439476 SPARCL1Q14515 664 aa6.76□□□□□ -1.33
BDNF-211ENST00000439476 KNOP1Q1ED39 458 aaKnown RBP6.76□□□□□ -1.33
BDNF-211ENST00000439476 CYB5D1Q6P9G0 228 aa6.76□□□□□ -1.33
BDNF-211ENST00000439476 ST13P4Q8IZP2 240 aaPredicted RBP6.76□□□□□ -1.33
BDNF-211ENST00000439476 SLC7A5P1Q8MH63 180 aa6.76□□□□□ -1.33
BDNF-211ENST00000439476 NACC2Q96BF6 587 aa6.76□□□□□ -1.33
BDNF-211ENST00000439476 SCYL1Q96KG9 808 aa6.76□□□□□ -1.33
BDNF-211ENST00000439476 CENPKQ9BS16 269 aa6.76□□□□□ -1.33
BDNF-211ENST00000439476 PITPNM3Q9BZ71 974 aa6.76□□□□□ -1.33
BDNF-211ENST00000439476 UPF3AQ9H1J1 476 aaKnown RBP6.76□□□□□ -1.33
BDNF-211ENST00000439476 STOML1Q9UBI4 398 aa6.76□□□□□ -1.33
BDNF-211ENST00000439476 CLEC11AQ9Y240 323 aa6.76□□□□□ -1.33
BDNF-211ENST00000439476 CACNA1FO60840 1977 aa6.76□□□□□ -1.33
BDNF-211ENST00000439476 A0A087X0T9 212 aa6.75□□□□□ -1.33
BDNF-211ENST00000439476 ZSCAN5CA6NGD5 496 aaPredicted RBP6.75□□□□□ -1.33
BDNF-211ENST00000439476 EIF4E1BA6NMX2 242 aaKnown RBP6.75□□□□□ -1.33
BDNF-211ENST00000439476 HNRNPCP07910 306 aaKnown RBP eCLIP6.75□□□□□ -1.33
BDNF-211ENST00000439476 FAM228BP0C875 321 aa6.75□□□□□ -1.33
BDNF-211ENST00000439476 CCNA1P78396 465 aa6.75□□□□□ -1.33
BDNF-211ENST00000439476 MEA1Q16626 185 aa6.75□□□□□ -1.33
BDNF-211ENST00000439476 C12orf60Q5U649 245 aa6.75□□□□□ -1.33
BDNF-211ENST00000439476 JADE1Q6IE81 842 aa6.75□□□□□ -1.33
BDNF-211ENST00000439476 DNAJC24Q6P3W2 148 aa6.75□□□□□ -1.33
BDNF-211ENST00000439476 ZNF449Q6P9G9 518 aa6.75□□□□□ -1.33
BDNF-211ENST00000439476 POTEEQ6S8J3 1075 aa6.75□□□□□ -1.33
BDNF-211ENST00000439476 ENOSF1Q7L5Y1 443 aa6.75□□□□□ -1.33
BDNF-211ENST00000439476 SCYL3Q8IZE3 742 aa6.75□□□□□ -1.33
BDNF-211ENST00000439476 TSEN2Q8NCE0 465 aaKnown RBP6.75□□□□□ -1.33
BDNF-211ENST00000439476 CELF1Q92879 486 aaKnown RBP6.75□□□□□ -1.33
BDNF-211ENST00000439476 GFM2Q969S9 779 aaKnown RBP6.75□□□□□ -1.33
BDNF-211ENST00000439476 DTNBP1Q96EV8 351 aa6.75□□□□□ -1.33
BDNF-211ENST00000439476 VCPKMTQ9H867 229 aa6.75□□□□□ -1.33
BDNF-211ENST00000439476 SERPINB13Q9UIV8 391 aa6.75□□□□□ -1.33
BDNF-211ENST00000439476 GGT7Q9UJ14 662 aa6.75□□□□□ -1.33
BDNF-211ENST00000439476 TLK1Q9UKI8 766 aa6.75□□□□□ -1.33
BDNF-211ENST00000439476 KDM6AO15550 1401 aaPredicted RBP6.75□□□□□ -1.33
BDNF-211ENST00000439476 STXBP3O00186 592 aa6.75□□□□□ -1.33
BDNF-211ENST00000439476 NFKBIAP25963 317 aa6.75□□□□□ -1.33
BDNF-211ENST00000439476 PPARGP37231 505 aaPredicted RBP6.75□□□□□ -1.33
BDNF-211ENST00000439476 PBX1P40424 430 aa6.75□□□□□ -1.33
BDNF-211ENST00000439476 USP11P51784 963 aa6.75□□□□□ -1.33
BDNF-211ENST00000439476 ZNF132P52740 706 aa6.75□□□□□ -1.33
BDNF-211ENST00000439476 KLHL38Q2WGJ6 581 aa6.75□□□□□ -1.33
BDNF-211ENST00000439476 FSCBQ5H9T9 825 aa6.75□□□□□ -1.33
BDNF-211ENST00000439476 MIS18BP1Q6P0N0 1132 aa6.75□□□□□ -1.33
BDNF-211ENST00000439476 FAM47EQ6ZV65 393 aa6.75□□□□□ -1.33
BDNF-211ENST00000439476 RFFLQ8WZ73 363 aa6.75□□□□□ -1.33
BDNF-211ENST00000439476 MTMR8Q96EF0 704 aa6.75□□□□□ -1.33
BDNF-211ENST00000439476 CEP95Q96GE4 821 aa6.75□□□□□ -1.33
BDNF-211ENST00000439476 RPAP3Q9H6T3 665 aaPredicted RBP6.75□□□□□ -1.33
BDNF-211ENST00000439476 ECT2Q9H8V3 914 aa6.75□□□□□ -1.33
BDNF-211ENST00000439476 EXOC1LA0A1B0GW35 172 aa6.75□□□□□ -1.33
BDNF-211ENST00000439476 CCT8L1PA6NM43 557 aa6.75□□□□□ -1.33
BDNF-211ENST00000439476 RNF225M0QZC1 329 aaPredicted RBP6.75□□□□□ -1.33
BDNF-211ENST00000439476 SGK1O00141 431 aa6.75□□□□□ -1.33
BDNF-211ENST00000439476 TJP3O95049 919 aa6.75□□□□□ -1.33
BDNF-211ENST00000439476 UCHL3P15374 230 aa6.75□□□□□ -1.33
BDNF-211ENST00000439476 CHRNA3P32297 505 aa6.75□□□□□ -1.33
BDNF-211ENST00000439476 PPP2R5DQ14738 602 aa6.75□□□□□ -1.33
BDNF-211ENST00000439476 DRAP1Q14919 205 aaPredicted RBP6.75□□□□□ -1.33
BDNF-211ENST00000439476 NXNQ6DKJ4 435 aa6.75□□□□□ -1.33
BDNF-211ENST00000439476 SPATA20Q8TB22 786 aa6.75□□□□□ -1.33
BDNF-211ENST00000439476 MDM1Q8TC05 714 aa6.75□□□□□ -1.33
BDNF-211ENST00000439476 ABTB1Q969K4 478 aaPredicted RBP6.75□□□□□ -1.33
BDNF-211ENST00000439476 FAM20AQ96MK3 541 aa6.75□□□□□ -1.33
BDNF-211ENST00000439476 ZNF577Q9BSK1 485 aa6.75□□□□□ -1.33
BDNF-211ENST00000439476 ANO3Q9BYT9 981 aa6.75□□□□□ -1.33
BDNF-211ENST00000439476 CELF4Q9BZC1 486 aaKnown RBP6.75□□□□□ -1.33
BDNF-211ENST00000439476 PCIF1Q9H4Z3 704 aa6.75□□□□□ -1.33
BDNF-211ENST00000439476 TMBIM4Q9HC24 238 aa6.75□□□□□ -1.33
BDNF-211ENST00000439476 GALNT8Q9NY28 637 aa6.75□□□□□ -1.33
BDNF-211ENST00000439476 SLC12A6Q9UHW9 1150 aa6.75□□□□□ -1.33
BDNF-211ENST00000439476 PCDHB4Q9Y5E5 795 aa6.75□□□□□ -1.33
BDNF-211ENST00000439476 A0A1B0GVG6 124 aa6.75□□□□□ -1.33
BDNF-211ENST00000439476 POTEFA5A3E0 1075 aa6.75□□□□□ -1.33
BDNF-211ENST00000439476 LPXNO60711 386 aa6.75□□□□□ -1.33
BDNF-211ENST00000439476 POTEIP0CG38 1075 aa6.75□□□□□ -1.33
BDNF-211ENST00000439476 BRAFP15056 766 aa6.75□□□□□ -1.33
BDNF-211ENST00000439476 CDC25CP30307 473 aa6.75□□□□□ -1.33
BDNF-211ENST00000439476 ECE1P42892 770 aa6.75□□□□□ -1.33
BDNF-211ENST00000439476 SKOR1P84550 965 aa6.75□□□□□ -1.33
BDNF-211ENST00000439476 POU5F1Q01860 360 aaKnown RBP6.75□□□□□ -1.33
BDNF-211ENST00000439476 BNIP1Q12981 228 aa6.75□□□□□ -1.33
BDNF-211ENST00000439476 DHX34Q14147 1143 aaKnown RBP6.75□□□□□ -1.33
BDNF-211ENST00000439476 LONRF1Q17RB8 773 aa6.75□□□□□ -1.33
BDNF-211ENST00000439476 KIAA1755Q5JYT7 1200 aa6.75□□□□□ -1.33
BDNF-211ENST00000439476 SCYL2Q6P3W7 929 aa6.75□□□□□ -1.33
BDNF-211ENST00000439476 WDR59Q6PJI9 974 aa6.75□□□□□ -1.33
BDNF-211ENST00000439476 POTEGQ6S5H5 508 aa6.75□□□□□ -1.33
BDNF-211ENST00000439476 TRIM72Q6ZMU5 477 aa6.75□□□□□ -1.33
BDNF-211ENST00000439476 RFX6Q8HWS3 928 aa6.75□□□□□ -1.33
BDNF-211ENST00000439476 SYN2Q92777 582 aaPredicted RBP6.75□□□□□ -1.33
BDNF-211ENST00000439476 PRMT1Q99873 361 aaKnown RBP6.75□□□□□ -1.33
BDNF-211ENST00000439476 FAM167BQ9BTA0 163 aa6.75□□□□□ -1.33
BDNF-211ENST00000439476 TLR10Q9BXR5 811 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms