RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 MPP4Q96JB8 637 aa16.83■□□□□ 0.28
DHFR-201ENST00000439211 NMRK1Q9NWW6 199 aa16.83■□□□□ 0.28
DHFR-201ENST00000439211 DNAJC12Q9UKB3 198 aa16.83■□□□□ 0.28
DHFR-201ENST00000439211 TAF1P21675 1872 aa16.83■□□□□ 0.28
DHFR-201ENST00000439211 UBR2Q8IWV8 1755 aa16.83■□□□□ 0.28
DHFR-201ENST00000439211 ARHGEF35A5YM69 484 aa16.83■□□□□ 0.28
DHFR-201ENST00000439211 PPEF1O14829 653 aaPredicted RBP16.83■□□□□ 0.28
DHFR-201ENST00000439211 AKAP3O75969 853 aa16.83■□□□□ 0.28
DHFR-201ENST00000439211 ITGA4P13612 1032 aa16.83■□□□□ 0.28
DHFR-201ENST00000439211 PSMC2P35998 433 aaKnown RBP16.83■□□□□ 0.28
DHFR-201ENST00000439211 SLC29A2Q14542 456 aa16.83■□□□□ 0.28
DHFR-201ENST00000439211 TMEM110Q86TL2 294 aa16.83■□□□□ 0.28
DHFR-201ENST00000439211 CENPTQ96BT3 561 aa16.83■□□□□ 0.28
DHFR-201ENST00000439211 TBK1Q9UHD2 729 aa16.83■□□□□ 0.28
DHFR-201ENST00000439211 PTPN22Q9Y2R2 807 aa16.83■□□□□ 0.28
DHFR-201ENST00000439211 SLIT2O94813 1529 aa16.82■□□□□ 0.28
DHFR-201ENST00000439211 E7ENQ6 273 aa16.82■□□□□ 0.28
DHFR-201ENST00000439211 NOL4O94818 638 aa16.82■□□□□ 0.28
DHFR-201ENST00000439211 TPBGLP0DKB5 382 aa16.82■□□□□ 0.28
DHFR-201ENST00000439211 GALCP54803 685 aa16.82■□□□□ 0.28
DHFR-201ENST00000439211 BPIFB4P59827 614 aa16.82■□□□□ 0.28
DHFR-201ENST00000439211 CCDC17Q96LX7 622 aa16.82■□□□□ 0.28
DHFR-201ENST00000439211 ZMAT2Q96NC0 199 aaKnown RBP16.82■□□□□ 0.28
DHFR-201ENST00000439211 NR1H4Q96RI1 486 aaPredicted RBP16.82■□□□□ 0.28
DHFR-201ENST00000439211 CHORDC1Q9UHD1 332 aaPredicted RBP16.82■□□□□ 0.28
DHFR-201ENST00000439211 PHF24Q9UPV7 400 aa16.82■□□□□ 0.28
DHFR-201ENST00000439211 MAPK13O15264 365 aa16.82■□□□□ 0.28
DHFR-201ENST00000439211 PON1P27169 355 aa16.82■□□□□ 0.28
DHFR-201ENST00000439211 KCNA1Q09470 495 aa16.82■□□□□ 0.28
DHFR-201ENST00000439211 MKRN4PQ13434 485 aaPredicted RBP16.82■□□□□ 0.28
DHFR-201ENST00000439211 MESDQ14696 234 aa16.82■□□□□ 0.28
DHFR-201ENST00000439211 RC3H1Q5TC82 1133 aaKnown RBP16.82■□□□□ 0.28
DHFR-201ENST00000439211 TMC3Q7Z5M5 1100 aa16.82■□□□□ 0.28
DHFR-201ENST00000439211 AMIGO3Q86WK7 504 aa16.82■□□□□ 0.28
DHFR-201ENST00000439211 FITM2Q8N6M3 262 aa16.82■□□□□ 0.28
DHFR-201ENST00000439211 PRPF31Q8WWY3 499 aaKnown RBP16.82■□□□□ 0.28
DHFR-201ENST00000439211 ARHGEF3Q9NR81 526 aa16.82■□□□□ 0.28
DHFR-201ENST00000439211 LNPEPQ9UIQ6 1025 aa16.82■□□□□ 0.28
DHFR-201ENST00000439211 F5H6K3 240 aa16.82■□□□□ 0.28
DHFR-201ENST00000439211 ATP5DP30049 168 aa16.82■□□□□ 0.28
DHFR-201ENST00000439211 USP11P51784 963 aa16.82■□□□□ 0.28
DHFR-201ENST00000439211 KLRC3Q07444 240 aa16.82■□□□□ 0.28
DHFR-201ENST00000439211 DRAP1Q14919 205 aaPredicted RBP16.82■□□□□ 0.28
DHFR-201ENST00000439211 ZCWPW2Q504Y3 356 aa16.82■□□□□ 0.28
DHFR-201ENST00000439211 C10orf76Q5T2E6 689 aa16.82■□□□□ 0.28
DHFR-201ENST00000439211 PHLDB2Q86SQ0 1253 aa16.82■□□□□ 0.28
DHFR-201ENST00000439211 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.82■□□□□ 0.285e-19■□□□□ 11
DHFR-201ENST00000439211 CCDC105Q8IYK2 499 aa16.82■□□□□ 0.28
DHFR-201ENST00000439211 SYN2Q92777 582 aaPredicted RBP16.82■□□□□ 0.28
DHFR-201ENST00000439211 TMOD2Q9NZR1 351 aa16.82■□□□□ 0.28
DHFR-201ENST00000439211 PPP1R11O60927 126 aaPredicted RBP16.81■□□□□ 0.28
DHFR-201ENST00000439211 POTEJP0CG39 1038 aa16.81■□□□□ 0.28
DHFR-201ENST00000439211 KPNB1Q14974 876 aaKnown RBP16.81■□□□□ 0.28
DHFR-201ENST00000439211 SUPT20HQ8NEM7 779 aa16.81■□□□□ 0.28
DHFR-201ENST00000439211 CYP2W1Q8TAV3 490 aa16.81■□□□□ 0.28
DHFR-201ENST00000439211 ZNF317Q96PQ6 595 aaPredicted RBP16.81■□□□□ 0.28
DHFR-201ENST00000439211 TMOD4Q9NZQ9 345 aa16.81■□□□□ 0.28
DHFR-201ENST00000439211 SERPINA10Q9UK55 444 aa16.81■□□□□ 0.28
DHFR-201ENST00000439211 ASB3Q9Y575 518 aa16.81■□□□□ 0.28
DHFR-201ENST00000439211 FAM163BP0C2L3 166 aa16.81■□□□□ 0.28
DHFR-201ENST00000439211 ALADP13716 330 aa16.81■□□□□ 0.28
DHFR-201ENST00000439211 CDR2Q01850 454 aa16.81■□□□□ 0.28
DHFR-201ENST00000439211 ABCB5Q2M3G0 1257 aa16.81■□□□□ 0.28
DHFR-201ENST00000439211 RBM26Q5T8P6 1007 aaKnown RBP16.81■□□□□ 0.28
DHFR-201ENST00000439211 ZNF746Q6NUN9 644 aaPredicted RBP16.81■□□□□ 0.28
DHFR-201ENST00000439211 PPP1R18Q6NYC8 613 aa16.81■□□□□ 0.28
DHFR-201ENST00000439211 CFAP61Q8NHU2 1237 aa16.81■□□□□ 0.28
DHFR-201ENST00000439211 TYW1Q9NV66 732 aaKnown RBP16.81■□□□□ 0.28
DHFR-201ENST00000439211 ETNK2Q9NVF9 386 aa16.81■□□□□ 0.28
DHFR-201ENST00000439211 DNAJC17Q9NVM6 304 aaKnown RBP16.81■□□□□ 0.28
DHFR-201ENST00000439211 TMEM120BA0PK00 339 aa16.81■□□□□ 0.28
DHFR-201ENST00000439211 AGTP01019 485 aa16.81■□□□□ 0.28
DHFR-201ENST00000439211 MLH1P40692 756 aa16.81■□□□□ 0.28
DHFR-201ENST00000439211 ADARP55265 1226 aaKnown RBP16.81■□□□□ 0.28
DHFR-201ENST00000439211 SEPT6Q14141 434 aa16.81■□□□□ 0.28
DHFR-201ENST00000439211 FRMD5Q7Z6J6 570 aa16.81■□□□□ 0.28
DHFR-201ENST00000439211 IKZF4Q9H2S9 585 aa16.81■□□□□ 0.28
DHFR-201ENST00000439211 OSGEPQ9NPF4 335 aa16.81■□□□□ 0.28
DHFR-201ENST00000439211 TJP3O95049 919 aa16.8■□□□□ 0.28
DHFR-201ENST00000439211 GJC1P36383 396 aa16.8■□□□□ 0.28
DHFR-201ENST00000439211 CNPY1Q3B7I2 92 aa16.8■□□□□ 0.28
DHFR-201ENST00000439211 EDRF1Q3B7T1 1238 aa16.8■□□□□ 0.28
DHFR-201ENST00000439211 CHADLQ6NUI6 762 aa16.8■□□□□ 0.28
DHFR-201ENST00000439211 NEUROG2Q9H2A3 272 aa16.8■□□□□ 0.28
DHFR-201ENST00000439211 DDX18Q9NVP1 670 aaKnown RBP16.8■□□□□ 0.28
DHFR-201ENST00000439211 SPATA7Q9P0W8 599 aa16.8■□□□□ 0.28
DHFR-201ENST00000439211 LSM1O15116 133 aaKnown RBP16.8■□□□□ 0.28
DHFR-201ENST00000439211 UNC5CO95185 931 aa16.8■□□□□ 0.28
DHFR-201ENST00000439211 CDC42EP5Q6NZY7 148 aa16.8■□□□□ 0.28
DHFR-201ENST00000439211 RINLQ6ZS11 566 aa16.8■□□□□ 0.28
DHFR-201ENST00000439211 EPS8L3Q8TE67 593 aaKnown RBP16.8■□□□□ 0.28
DHFR-201ENST00000439211 SH2D3AQ9BRG2 576 aa16.8■□□□□ 0.28
DHFR-201ENST00000439211 CCDC188H7C350 402 aa16.8■□□□□ 0.28
DHFR-201ENST00000439211 FGFR4P22455 802 aa16.8■□□□□ 0.28
DHFR-201ENST00000439211 EIF4BP23588 611 aaKnown RBP16.8■□□□□ 0.28
DHFR-201ENST00000439211 GIT2Q14161 759 aa16.8■□□□□ 0.28
DHFR-201ENST00000439211 FAM13CQ8NE31 585 aa16.8■□□□□ 0.28
DHFR-201ENST00000439211 MORC4Q8TE76 937 aa16.8■□□□□ 0.28
DHFR-201ENST00000439211 LZICQ8WZA0 190 aa16.8■□□□□ 0.28
DHFR-201ENST00000439211 TTC1Q99614 292 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms