RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 SIK1P57059 783 aa14.3□□□□□ -0.12
ACTN1-204ENST00000438964 LAMB3Q13751 1172 aa14.3□□□□□ -0.12
ACTN1-204ENST00000438964 FASTKD3Q14CZ7 662 aaKnown RBP14.3□□□□□ -0.12
ACTN1-204ENST00000438964 TNFAIP8L3Q5GJ75 292 aa14.3□□□□□ -0.12
ACTN1-204ENST00000438964 MDH1BQ5I0G3 518 aa14.3□□□□□ -0.12
ACTN1-204ENST00000438964 NEDD1Q8NHV4 660 aa14.3□□□□□ -0.12
ACTN1-204ENST00000438964 STK33Q9BYT3 514 aa14.3□□□□□ -0.12
ACTN1-204ENST00000438964 TYW1Q9NV66 732 aaKnown RBP14.3□□□□□ -0.12
ACTN1-204ENST00000438964 NCANO14594 1321 aa14.3□□□□□ -0.12
ACTN1-204ENST00000438964 BCL9O00512 1426 aa14.3□□□□□ -0.12
ACTN1-204ENST00000438964 PAPPAQ13219 1627 aa14.3□□□□□ -0.12
ACTN1-204ENST00000438964 NHSL1Q5SYE7 1610 aa14.3□□□□□ -0.12
ACTN1-204ENST00000438964 PITPNM2Q9BZ72 1349 aa14.29□□□□□ -0.12
ACTN1-204ENST00000438964 CFAP69A5D8W1 941 aa14.29□□□□□ -0.12
ACTN1-204ENST00000438964 TTC4O95801 387 aa14.29□□□□□ -0.12
ACTN1-204ENST00000438964 KRT15P19012 456 aa14.29□□□□□ -0.12
ACTN1-204ENST00000438964 RRM1P23921 792 aa14.29□□□□□ -0.12
ACTN1-204ENST00000438964 CTNNA2P26232 953 aa14.29□□□□□ -0.12
ACTN1-204ENST00000438964 RPA3P35244 121 aaPredicted RBP14.29□□□□□ -0.12
ACTN1-204ENST00000438964 SSR1P43307 286 aaKnown RBP14.29□□□□□ -0.12
ACTN1-204ENST00000438964 MIPEPQ99797 713 aa14.29□□□□□ -0.12
ACTN1-204ENST00000438964 TXLNGQ9NUQ3 528 aa14.29□□□□□ -0.12
ACTN1-204ENST00000438964 PCYOX1Q9UHG3 505 aa14.29□□□□□ -0.12
ACTN1-204ENST00000438964 KIAA1551Q9HCM1 1747 aa14.29□□□□□ -0.12
ACTN1-204ENST00000438964 A0A0G2JND7 137 aa14.29□□□□□ -0.12
ACTN1-204ENST00000438964 GOLGA8SH3BPF8 625 aa14.29□□□□□ -0.12
ACTN1-204ENST00000438964 GOLGA8MH3BSY2 632 aa14.29□□□□□ -0.12
ACTN1-204ENST00000438964 EML1O00423 815 aa14.29□□□□□ -0.12
ACTN1-204ENST00000438964 CYP26A1O43174 497 aa14.29□□□□□ -0.12
ACTN1-204ENST00000438964 KCNQ2O43526 872 aa14.29□□□□□ -0.12
ACTN1-204ENST00000438964 ATP9AO75110 1047 aa14.29□□□□□ -0.12
ACTN1-204ENST00000438964 GYS1P13807 737 aa14.29□□□□□ -0.12
ACTN1-204ENST00000438964 SERPINB4P48594 390 aa14.29□□□□□ -0.12
ACTN1-204ENST00000438964 POLGP54098 1239 aaPredicted RBP14.29□□□□□ -0.12
ACTN1-204ENST00000438964 NPEPPSP55786 919 aa14.29□□□□□ -0.12
ACTN1-204ENST00000438964 MYL7Q01449 175 aa14.29□□□□□ -0.12
ACTN1-204ENST00000438964 SLC47A2Q86VL8 602 aa14.29□□□□□ -0.12
ACTN1-204ENST00000438964 LRRC8CQ8TDW0 803 aa14.29□□□□□ -0.12
ACTN1-204ENST00000438964 ANKRD36CQ5JPF3 1778 aa14.29□□□□□ -0.12
ACTN1-204ENST00000438964 KDM3AQ9Y4C1 1321 aa14.28□□□□□ -0.12
ACTN1-204ENST00000438964 hCG_2014768A0A024R1R8 64 aa14.28□□□□□ -0.12
ACTN1-204ENST00000438964 A0A1W2PPM1 405 aa14.28□□□□□ -0.12
ACTN1-204ENST00000438964 PDXKO00764 312 aa14.28□□□□□ -0.12
ACTN1-204ENST00000438964 NVLO15381 856 aaKnown RBP14.28□□□□□ -0.12
ACTN1-204ENST00000438964 AHCYL1O43865 530 aa14.28□□□□□ -0.12
ACTN1-204ENST00000438964 TTLL1O95922 423 aa14.28□□□□□ -0.12
ACTN1-204ENST00000438964 KPNB1Q14974 876 aaKnown RBP14.28□□□□□ -0.12
ACTN1-204ENST00000438964 SIX1Q15475 284 aaPredicted RBP14.28□□□□□ -0.12
ACTN1-204ENST00000438964 PKN2Q16513 984 aaKnown RBP14.28□□□□□ -0.12
ACTN1-204ENST00000438964 MFSD5Q6N075 450 aa14.28□□□□□ -0.12
ACTN1-204ENST00000438964 BTNL9Q6UXG8 535 aa14.28□□□□□ -0.12
ACTN1-204ENST00000438964 ASAP3Q8TDY4 903 aa14.28□□□□□ -0.12
ACTN1-204ENST00000438964 MAGEB18Q96M61 343 aa14.28□□□□□ -0.12
ACTN1-204ENST00000438964 EPAS1Q99814 870 aa14.28□□□□□ -0.12
ACTN1-204ENST00000438964 PCMTD2Q9NV79 361 aa14.28□□□□□ -0.12
ACTN1-204ENST00000438964 PKD2L1Q9P0L9 805 aa14.28□□□□□ -0.12
ACTN1-204ENST00000438964 APEX2Q9UBZ4 518 aa14.28□□□□□ -0.12
ACTN1-204ENST00000438964 ANAPC5Q9UJX4 755 aa14.28□□□□□ -0.12
ACTN1-204ENST00000438964 MTUS1Q9ULD2 1270 aa14.28□□□□□ -0.12
ACTN1-204ENST00000438964 LRRC42Q9Y546 428 aa14.28□□□□□ -0.12
ACTN1-204ENST00000438964 WASF2Q9Y6W5 498 aa14.28□□□□□ -0.12
ACTN1-204ENST00000438964 EXOC3O60645 756 aa14.28□□□□□ -0.12
ACTN1-204ENST00000438964 FAM13AO94988 1023 aa14.28□□□□□ -0.12
ACTN1-204ENST00000438964 ZSCAN5DPP0CG00 497 aa14.28□□□□□ -0.12
ACTN1-204ENST00000438964 RPL13P26373 211 aaKnown RBP14.28□□□□□ -0.12
ACTN1-204ENST00000438964 SNX30Q5VWJ9 437 aa14.28□□□□□ -0.12
ACTN1-204ENST00000438964 ARHGEF18Q6ZSZ5 1173 aa14.28□□□□□ -0.12
ACTN1-204ENST00000438964 SCYL3Q8IZE3 742 aa14.28□□□□□ -0.12
ACTN1-204ENST00000438964 ZNF564Q8TBZ8 553 aaPredicted RBP14.28□□□□□ -0.12
ACTN1-204ENST00000438964 SCG3Q8WXD2 468 aaKnown RBP14.28□□□□□ -0.12
ACTN1-204ENST00000438964 ZNF653Q96CK0 615 aa14.28□□□□□ -0.12
ACTN1-204ENST00000438964 ZBTB12Q9Y330 459 aaPredicted RBP14.28□□□□□ -0.12
ACTN1-204ENST00000438964 PCDHA1Q9Y5I3 950 aa14.28□□□□□ -0.12
ACTN1-204ENST00000438964 GOLGA8IPA6NC78 632 aa14.28□□□□□ -0.12
ACTN1-204ENST00000438964 GOLGA8JA6NMD2 632 aa14.28□□□□□ -0.12
ACTN1-204ENST00000438964 FAM86B1E9PN63 330 aa14.28□□□□□ -0.12
ACTN1-204ENST00000438964 CAPN9O14815 690 aa14.28□□□□□ -0.12
ACTN1-204ENST00000438964 ZBED4O75132 1171 aa14.28□□□□□ -0.12
ACTN1-204ENST00000438964 FAM86B2P0C5J1 330 aa14.28□□□□□ -0.12
ACTN1-204ENST00000438964 KCNA3P22001 575 aa14.28□□□□□ -0.12
ACTN1-204ENST00000438964 CA4P22748 312 aa14.28□□□□□ -0.12
ACTN1-204ENST00000438964 PSMC4P43686 418 aa14.28□□□□□ -0.12
ACTN1-204ENST00000438964 MTMR2Q13614 643 aa14.28□□□□□ -0.12
ACTN1-204ENST00000438964 SLC1A5Q15758 541 aa14.28□□□□□ -0.12
ACTN1-204ENST00000438964 PLEKHG4Q58EX7 1191 aa14.28□□□□□ -0.12
ACTN1-204ENST00000438964 CEP120Q8N960 986 aa14.28□□□□□ -0.12
ACTN1-204ENST00000438964 GLIS1Q8NBF1 620 aa14.28□□□□□ -0.12
ACTN1-204ENST00000438964 FBXO6Q9NRD1 293 aaPredicted RBP14.28□□□□□ -0.12
ACTN1-204ENST00000438964 ETS1P14921 441 aa14.27□□□□□ -0.12
ACTN1-204ENST00000438964 PSMC2P35998 433 aaKnown RBP14.27□□□□□ -0.12
ACTN1-204ENST00000438964 NEK3P51956 506 aa14.27□□□□□ -0.12
ACTN1-204ENST00000438964 DRG2P55039 364 aaKnown RBP14.27□□□□□ -0.12
ACTN1-204ENST00000438964 STRN3Q13033 797 aa14.27□□□□□ -0.12
ACTN1-204ENST00000438964 LRRC36Q1X8D7 754 aa14.27□□□□□ -0.12
ACTN1-204ENST00000438964 TSNAXIP1Q2TAA8 658 aa14.27□□□□□ -0.12
ACTN1-204ENST00000438964 ZFYVE27Q5T4F4 411 aa14.27□□□□□ -0.12
ACTN1-204ENST00000438964 PPP4R3CPQ6ZMV5 832 aa14.27□□□□□ -0.12
ACTN1-204ENST00000438964 SYCP3Q8IZU3 236 aa14.27□□□□□ -0.12
ACTN1-204ENST00000438964 PPM1KQ8N3J5 372 aa14.27□□□□□ -0.12
ACTN1-204ENST00000438964 WDR60Q8WVS4 1066 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms