RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 FDXACB1Q9BRP7 624 aaPredicted RBP12.52□□□□□ -0.41
CSTF3-203ENST00000438862 COLEC11Q9BWP8 271 aa12.52□□□□□ -0.41
CSTF3-203ENST00000438862 HEBP1Q9NRV9 189 aa12.52□□□□□ -0.41
CSTF3-203ENST00000438862 PRG3Q9Y2Y8 225 aaPredicted RBP12.52□□□□□ -0.41
CSTF3-203ENST00000438862 CEP295Q9C0D2 2601 aa12.52□□□□□ -0.41
CSTF3-203ENST00000438862 IGLV3-22A0A075B6J6 115 aa12.51□□□□□ -0.41
CSTF3-203ENST00000438862 hCG_1642624A0A1W2PR95 340 aa12.51□□□□□ -0.41
CSTF3-203ENST00000438862 C1QTNF9BB2RNN3 333 aa12.51□□□□□ -0.41
CSTF3-203ENST00000438862 XYLBO75191 536 aa12.51□□□□□ -0.41
CSTF3-203ENST00000438862 ECI2O75521 394 aa12.51□□□□□ -0.41
CSTF3-203ENST00000438862 KCNK5O95279 499 aa12.51□□□□□ -0.41
CSTF3-203ENST00000438862 CYP3A4P08684 503 aa12.51□□□□□ -0.41
CSTF3-203ENST00000438862 C1QTNF9P0C862 333 aa12.51□□□□□ -0.41
CSTF3-203ENST00000438862 HOXA9P31269 272 aa12.51□□□□□ -0.41
CSTF3-203ENST00000438862 CXCL12P48061 93 aa12.51□□□□□ -0.41
CSTF3-203ENST00000438862 NAPAP54920 295 aa12.51□□□□□ -0.41
CSTF3-203ENST00000438862 ANTXR2P58335 489 aa12.51□□□□□ -0.41
CSTF3-203ENST00000438862 PPP1R18Q6NYC8 613 aa12.51□□□□□ -0.41
CSTF3-203ENST00000438862 DNASE1L2Q92874 299 aa12.51□□□□□ -0.41
CSTF3-203ENST00000438862 MAP4K1Q92918 833 aa12.51□□□□□ -0.41
CSTF3-203ENST00000438862 TATDN2Q93075 761 aa12.51□□□□□ -0.41
CSTF3-203ENST00000438862 KCNH3Q9ULD8 1083 aa12.51□□□□□ -0.41
CSTF3-203ENST00000438862 ZZEF1O43149 2961 aa12.51□□□□□ -0.41
CSTF3-203ENST00000438862 CCDC69A6NI79 296 aa12.5□□□□□ -0.41
CSTF3-203ENST00000438862 WDR64B1ANS9 1081 aa12.5□□□□□ -0.41
CSTF3-203ENST00000438862 ZNF862O60290 1169 aa12.5□□□□□ -0.41
CSTF3-203ENST00000438862 ADCY7P51828 1080 aa12.5□□□□□ -0.41
CSTF3-203ENST00000438862 NTHL1P78549 312 aa12.5□□□□□ -0.41
CSTF3-203ENST00000438862 SETQ01105 290 aaPredicted RBP12.5□□□□□ -0.41
CSTF3-203ENST00000438862 PRKCEQ02156 737 aa12.5□□□□□ -0.41
CSTF3-203ENST00000438862 DRP2Q13474 957 aa12.5□□□□□ -0.41
CSTF3-203ENST00000438862 TARBP2Q15633 366 aaKnown RBP12.5□□□□□ -0.41
CSTF3-203ENST00000438862 PPM1LQ5SGD2 360 aa12.5□□□□□ -0.41
CSTF3-203ENST00000438862 LIN9Q5TKA1 542 aa12.5□□□□□ -0.41
CSTF3-203ENST00000438862 CASC1Q6TDU7 716 aa12.5□□□□□ -0.41
CSTF3-203ENST00000438862 NFXL1Q6ZNB6 911 aa12.5□□□□□ -0.41
CSTF3-203ENST00000438862 LONP2Q86WA8 852 aa12.5□□□□□ -0.41
CSTF3-203ENST00000438862 GLYCTKQ8IVS8 523 aa12.5□□□□□ -0.41
CSTF3-203ENST00000438862 CCDC82Q8N4S0 544 aa12.5□□□□□ -0.41
CSTF3-203ENST00000438862 C12orf50Q8NA57 414 aaPredicted RBP12.5□□□□□ -0.41
CSTF3-203ENST00000438862 MTRQ99707 1265 aa12.5□□□□□ -0.41
CSTF3-203ENST00000438862 LSM14BQ9BX40 385 aaKnown RBP12.5□□□□□ -0.41
CSTF3-203ENST00000438862 LMAN1LQ9HAT1 526 aa12.5□□□□□ -0.41
CSTF3-203ENST00000438862 AGPAT5Q9NUQ2 364 aa12.5□□□□□ -0.41
CSTF3-203ENST00000438862 NDRG2Q9UN36 371 aaKnown RBP12.5□□□□□ -0.41
CSTF3-203ENST00000438862 ZFYVE26Q68DK2 2539 aa12.5□□□□□ -0.41
CSTF3-203ENST00000438862 SPEGQ15772 3267 aa12.5□□□□□ -0.41
CSTF3-203ENST00000438862 GREB1Q4ZG55 1949 aa12.49□□□□□ -0.41
CSTF3-203ENST00000438862 IGKV6-21A0A0C4DH24 114 aa12.49□□□□□ -0.41
CSTF3-203ENST00000438862 SMCO2A6NFE2 343 aa12.49□□□□□ -0.41
CSTF3-203ENST00000438862 SHISA7A6NL88 538 aa12.49□□□□□ -0.41
CSTF3-203ENST00000438862 POU2F2P09086 479 aa12.49□□□□□ -0.41
CSTF3-203ENST00000438862 ZNF806P0C7X5 589 aa12.49□□□□□ -0.41
CSTF3-203ENST00000438862 NCLP19338 710 aaKnown RBP12.49□□□□□ -0.41
CSTF3-203ENST00000438862 CLK2P49760 499 aaKnown RBP12.49□□□□□ -0.41
CSTF3-203ENST00000438862 DSC1Q08554 894 aa12.49□□□□□ -0.41
CSTF3-203ENST00000438862 E2F4Q16254 413 aa12.49□□□□□ -0.41
CSTF3-203ENST00000438862 UVSSAQ2YD98 709 aa12.49□□□□□ -0.41
CSTF3-203ENST00000438862 BMP2KLQ5H9B9 411 aa12.49□□□□□ -0.41
CSTF3-203ENST00000438862 WWC2Q6AWC2 1192 aa12.49□□□□□ -0.41
CSTF3-203ENST00000438862 RHPN2Q8IUC4 686 aa12.49□□□□□ -0.41
CSTF3-203ENST00000438862 ITFG1Q8TB96 612 aa12.49□□□□□ -0.41
CSTF3-203ENST00000438862 CRYGNQ8WXF5 182 aa12.49□□□□□ -0.41
CSTF3-203ENST00000438862 NIFKQ9BYG3 293 aaKnown RBP12.49□□□□□ -0.41
CSTF3-203ENST00000438862 DISC1Q9NRI5 854 aa12.49□□□□□ -0.41
CSTF3-203ENST00000438862 GDE1Q9NZC3 331 aa12.49□□□□□ -0.41
CSTF3-203ENST00000438862 SUCLA2Q9P2R7 463 aaPredicted RBP12.49□□□□□ -0.41
CSTF3-203ENST00000438862 FBXW11Q9UKB1 542 aa12.49□□□□□ -0.41
CSTF3-203ENST00000438862 hCG_1984214I3L0E3 225 aa12.48□□□□□ -0.41
CSTF3-203ENST00000438862 ITGA4P13612 1032 aa12.48□□□□□ -0.41
CSTF3-203ENST00000438862 STPG1Q5TH74 334 aa12.48□□□□□ -0.41
CSTF3-203ENST00000438862 FUT10Q6P4F1 479 aa12.48□□□□□ -0.41
CSTF3-203ENST00000438862 TMTC3Q6ZXV5 915 aa12.48□□□□□ -0.41
CSTF3-203ENST00000438862 RTL10Q7L3V2 364 aa12.48□□□□□ -0.41
CSTF3-203ENST00000438862 NPAS3Q8IXF0 933 aa12.48□□□□□ -0.41
CSTF3-203ENST00000438862 MB21D2Q8IYB1 491 aaPredicted RBP12.48□□□□□ -0.41
CSTF3-203ENST00000438862 FAM160A2Q8N612 972 aaPredicted RBP12.48□□□□□ -0.41
CSTF3-203ENST00000438862 ZNF713Q8N859 430 aaPredicted RBP12.48□□□□□ -0.41
CSTF3-203ENST00000438862 FANCBQ8NB91 859 aa12.48□□□□□ -0.41
CSTF3-203ENST00000438862 ELSPBP1Q96BH3 223 aa12.48□□□□□ -0.41
CSTF3-203ENST00000438862 LOXL4Q96JB6 756 aa12.48□□□□□ -0.41
CSTF3-203ENST00000438862 TMEM87BQ96K49 555 aa12.48□□□□□ -0.41
CSTF3-203ENST00000438862 B3GALT6Q96L58 329 aa12.48□□□□□ -0.41
CSTF3-203ENST00000438862 GPR62Q9BZJ7 368 aa12.48□□□□□ -0.41
CSTF3-203ENST00000438862 POLIQ9UNA4 740 aa12.48□□□□□ -0.41
CSTF3-203ENST00000438862 TDRD15B5MCY1 1934 aaKnown RBP12.47□□□□□ -0.41
CSTF3-203ENST00000438862 ARL5CA6NH57 179 aa12.47□□□□□ -0.41
CSTF3-203ENST00000438862 SRRM3A6NNA2 597 aaPredicted RBP12.47□□□□□ -0.41
CSTF3-203ENST00000438862 CHURC1-FNTBB4DL54 471 aa12.47□□□□□ -0.41
CSTF3-203ENST00000438862 CCL16O15467 120 aa12.47□□□□□ -0.41
CSTF3-203ENST00000438862 MAFO75444 373 aaPredicted RBP12.47□□□□□ -0.41
CSTF3-203ENST00000438862 PAPSS2O95340 614 aaPredicted RBP12.47□□□□□ -0.41
CSTF3-203ENST00000438862 C8AP07357 584 aa12.47□□□□□ -0.41
CSTF3-203ENST00000438862 RPL17P18621 184 aaKnown RBP12.47□□□□□ -0.41
CSTF3-203ENST00000438862 RXRAP19793 462 aa12.47□□□□□ -0.41
CSTF3-203ENST00000438862 SFNP31947 248 aa12.47□□□□□ -0.41
CSTF3-203ENST00000438862 LIFRP42702 1097 aa12.47□□□□□ -0.41
CSTF3-203ENST00000438862 FNTBP49356 437 aa12.47□□□□□ -0.41
CSTF3-203ENST00000438862 SATB1Q01826 763 aa12.47□□□□□ -0.41
CSTF3-203ENST00000438862 PABPC1LQ4VXU2 614 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 156.8 ms