RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 DKK2Q9UBU2 259 aa4.54□□□□□ -1.68
HMGB3P12-201ENST00000438745 EDARQ9UNE0 448 aa4.54□□□□□ -1.68
HMGB3P12-201ENST00000438745 FZD1Q9UP38 647 aa4.54□□□□□ -1.68
HMGB3P12-201ENST00000438745 HS3ST4Q9Y661 456 aa4.54□□□□□ -1.68
HMGB3P12-201ENST00000438745 COL4A3Q01955 1670 aa4.54□□□□□ -1.68
HMGB3P12-201ENST00000438745 ATRNL1Q5VV63 1379 aa4.53□□□□□ -1.68
HMGB3P12-201ENST00000438745 hCG_2014768A0A024R1R8 64 aa4.53□□□□□ -1.68
HMGB3P12-201ENST00000438745 B5MCH6 92 aa4.53□□□□□ -1.68
HMGB3P12-201ENST00000438745 PRAMEF4O60810 478 aa4.53□□□□□ -1.68
HMGB3P12-201ENST00000438745 FAM20BO75063 409 aa4.53□□□□□ -1.68
HMGB3P12-201ENST00000438745 HSP90B1P14625 803 aaKnown RBP4.53□□□□□ -1.68
HMGB3P12-201ENST00000438745 ZFP36P26651 326 aaKnown RBP4.53□□□□□ -1.68
HMGB3P12-201ENST00000438745 PTGS2P35354 604 aa4.53□□□□□ -1.68
HMGB3P12-201ENST00000438745 MTNR1BP49286 362 aa4.53□□□□□ -1.68
HMGB3P12-201ENST00000438745 TMPRSS15P98073 1019 aa4.53□□□□□ -1.68
HMGB3P12-201ENST00000438745 CDK17Q00537 523 aa4.53□□□□□ -1.68
HMGB3P12-201ENST00000438745 PPP3CAQ08209 521 aa4.53□□□□□ -1.68
HMGB3P12-201ENST00000438745 MFSD14BQ5SR56 506 aa4.53□□□□□ -1.68
HMGB3P12-201ENST00000438745 GJC2Q5T442 439 aaPredicted RBP4.53□□□□□ -1.68
HMGB3P12-201ENST00000438745 METRNLQ641Q3 311 aa4.53□□□□□ -1.68
HMGB3P12-201ENST00000438745 PCSK4Q6UW60 755 aa4.53□□□□□ -1.68
HMGB3P12-201ENST00000438745 LDLRAD3Q86YD5 345 aa4.53□□□□□ -1.68
HMGB3P12-201ENST00000438745 SYT12Q8IV01 421 aa4.53□□□□□ -1.68
HMGB3P12-201ENST00000438745 ZNF276Q8N554 614 aa4.53□□□□□ -1.68
HMGB3P12-201ENST00000438745 ATL2Q8NHH9 583 aa4.53□□□□□ -1.68
HMGB3P12-201ENST00000438745 TGFBRAP1Q8WUH2 860 aa4.53□□□□□ -1.68
HMGB3P12-201ENST00000438745 HOXB13Q92826 284 aaPredicted RBP4.53□□□□□ -1.68
HMGB3P12-201ENST00000438745 CLIP3Q96DZ5 547 aa4.53□□□□□ -1.68
HMGB3P12-201ENST00000438745 CEP95Q96GE4 821 aa4.53□□□□□ -1.68
HMGB3P12-201ENST00000438745 AHCYL2Q96HN2 611 aaKnown RBP4.53□□□□□ -1.68
HMGB3P12-201ENST00000438745 DCLRE1CQ96SD1 692 aaKnown RBP4.53□□□□□ -1.68
HMGB3P12-201ENST00000438745 CDC5LQ99459 802 aaKnown RBP4.53□□□□□ -1.68
HMGB3P12-201ENST00000438745 KRTAP9-8Q9BYQ0 159 aa4.53□□□□□ -1.68
HMGB3P12-201ENST00000438745 GREM2Q9H772 168 aa4.53□□□□□ -1.68
HMGB3P12-201ENST00000438745 BCO1Q9HAY6 547 aa4.53□□□□□ -1.68
HMGB3P12-201ENST00000438745 C14orf119Q9NWQ9 140 aa4.53□□□□□ -1.68
HMGB3P12-201ENST00000438745 FAM30AQ9NZY2 134 aa4.53□□□□□ -1.68
HMGB3P12-201ENST00000438745 CFTRP13569 1480 aa4.53□□□□□ -1.68
HMGB3P12-201ENST00000438745 DIP2BQ9P265 1576 aa4.53□□□□□ -1.69
HMGB3P12-201ENST00000438745 PPM1GO15355 546 aaPredicted RBP4.52□□□□□ -1.69
HMGB3P12-201ENST00000438745 PJA2O43164 708 aa4.52□□□□□ -1.69
HMGB3P12-201ENST00000438745 FLT3LGP49771 235 aa4.52□□□□□ -1.69
HMGB3P12-201ENST00000438745 INAVAQ3KP66 663 aa4.52□□□□□ -1.69
HMGB3P12-201ENST00000438745 PRAMEF14Q5SWL7 426 aa4.52□□□□□ -1.69
HMGB3P12-201ENST00000438745 PDZD4Q76G19 769 aaPredicted RBP4.52□□□□□ -1.69
HMGB3P12-201ENST00000438745 ZNF572Q7Z3I7 529 aaPredicted RBP4.52□□□□□ -1.69
HMGB3P12-201ENST00000438745 OR7D4Q8NG98 312 aa4.52□□□□□ -1.69
HMGB3P12-201ENST00000438745 ZCRB1Q8TBF4 217 aaKnown RBP4.52□□□□□ -1.69
HMGB3P12-201ENST00000438745 ZNF480Q8WV37 535 aa4.52□□□□□ -1.69
HMGB3P12-201ENST00000438745 NEU4Q8WWR8 484 aaPredicted RBP4.52□□□□□ -1.69
HMGB3P12-201ENST00000438745 PRRX2Q99811 253 aa4.52□□□□□ -1.69
HMGB3P12-201ENST00000438745 EPC1Q9H2F5 836 aa4.52□□□□□ -1.69
HMGB3P12-201ENST00000438745 SLITRK6Q9H5Y7 841 aa4.52□□□□□ -1.69
HMGB3P12-201ENST00000438745 SORCS3Q9UPU3 1222 aa4.52□□□□□ -1.69
HMGB3P12-201ENST00000438745 HDAC5Q9UQL6 1122 aa4.52□□□□□ -1.69
HMGB3P12-201ENST00000438745 CHST2Q9Y4C5 530 aa4.52□□□□□ -1.69
HMGB3P12-201ENST00000438745 TDRD9Q8NDG6 1382 aaKnown RBP4.52□□□□□ -1.69
HMGB3P12-201ENST00000438745 TOPBP1Q92547 1522 aa4.51□□□□□ -1.69
HMGB3P12-201ENST00000438745 TRIM75PA6NK02 468 aa4.51□□□□□ -1.69
HMGB3P12-201ENST00000438745 PRR5-ARHGAP8B1AHC4 643 aa4.51□□□□□ -1.69
HMGB3P12-201ENST00000438745 DIRC3C9JPN6 131 aa4.51□□□□□ -1.69
HMGB3P12-201ENST00000438745 LEFTY2O00292 366 aa4.51□□□□□ -1.69
HMGB3P12-201ENST00000438745 WNT10BO00744 389 aa4.51□□□□□ -1.69
HMGB3P12-201ENST00000438745 AKR1B10O60218 316 aa4.51□□□□□ -1.69
HMGB3P12-201ENST00000438745 RECQL4O94761 1208 aa4.51□□□□□ -1.69
HMGB3P12-201ENST00000438745 ITGB1P05556 798 aa4.51□□□□□ -1.69
HMGB3P12-201ENST00000438745 ADH4P08319 380 aa4.51□□□□□ -1.69
HMGB3P12-201ENST00000438745 ALOX15P16050 662 aaPredicted RBP4.51□□□□□ -1.69
HMGB3P12-201ENST00000438745 SREBF1P36956 1147 aa4.51□□□□□ -1.69
HMGB3P12-201ENST00000438745 MCAMP43121 646 aa4.51□□□□□ -1.69
HMGB3P12-201ENST00000438745 INHBCP55103 352 aa4.51□□□□□ -1.69
HMGB3P12-201ENST00000438745 ANAPC15P60006 121 aa4.51□□□□□ -1.69
HMGB3P12-201ENST00000438745 IGBP1P78318 339 aa4.51□□□□□ -1.69
HMGB3P12-201ENST00000438745 FAM50AQ14320 339 aaKnown RBP4.51□□□□□ -1.69
HMGB3P12-201ENST00000438745 MUM1L1Q5H9M0 696 aa4.51□□□□□ -1.69
HMGB3P12-201ENST00000438745 TOR2AQ5JU69 321 aa4.51□□□□□ -1.69
HMGB3P12-201ENST00000438745 DDX42Q86XP3 938 aaKnown RBP eCLIP4.51□□□□□ -1.69
HMGB3P12-201ENST00000438745 RPUSD2Q8IZ73 545 aaKnown RBP4.51□□□□□ -1.69
HMGB3P12-201ENST00000438745 MDM1Q8TC05 714 aa4.51□□□□□ -1.69
HMGB3P12-201ENST00000438745 CPT1CQ8TCG5 803 aa4.51□□□□□ -1.69
HMGB3P12-201ENST00000438745 CHFRQ96EP1 664 aa4.51□□□□□ -1.69
HMGB3P12-201ENST00000438745 MYEOVQ96EZ4 313 aa4.51□□□□□ -1.69
HMGB3P12-201ENST00000438745 MENTQ9BUN1 341 aa4.51□□□□□ -1.69
HMGB3P12-201ENST00000438745 SLC46A2Q9BY10 475 aa4.51□□□□□ -1.69
HMGB3P12-201ENST00000438745 QRSL1Q9H0R6 528 aaKnown RBP4.51□□□□□ -1.69
HMGB3P12-201ENST00000438745 IKZF4Q9H2S9 585 aa4.51□□□□□ -1.69
HMGB3P12-201ENST00000438745 ZNF768Q9H5H4 540 aaKnown RBP4.51□□□□□ -1.69
HMGB3P12-201ENST00000438745 NRDE2Q9H7Z3 1164 aa4.51□□□□□ -1.69
HMGB3P12-201ENST00000438745 ZNF277Q9NRM2 450 aaPredicted RBP4.51□□□□□ -1.69
HMGB3P12-201ENST00000438745 RBM12Q9NTZ6 932 aaKnown RBP4.51□□□□□ -1.69
HMGB3P12-201ENST00000438745 MROH2BQ7Z745 1585 aa4.51□□□□□ -1.69
HMGB3P12-201ENST00000438745 TSPOAP1O95153 1857 aa4.51□□□□□ -1.69
HMGB3P12-201ENST00000438745 PNPLA7Q6ZV29 1317 aa4.5□□□□□ -1.69
HMGB3P12-201ENST00000438745 PCF11O94913 1555 aaKnown RBP4.5□□□□□ -1.69
HMGB3P12-201ENST00000438745 GAGE12BA1L429 117 aa4.5□□□□□ -1.69
HMGB3P12-201ENST00000438745 GAGE12HA6NDE8 117 aa4.5□□□□□ -1.69
HMGB3P12-201ENST00000438745 TMEM200CA6NKL6 621 aa4.5□□□□□ -1.69
HMGB3P12-201ENST00000438745 FOXN1O15353 648 aa4.5□□□□□ -1.69
HMGB3P12-201ENST00000438745 ADCY6O43306 1168 aa4.5□□□□□ -1.69
HMGB3P12-201ENST00000438745 PPFIA4O75335 1185 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms